Array 1 70399-73352 **** Predicted by CRISPRDetect 2.4 *** >NZ_QIVM01000013.1 Klebsiella pneumoniae strain WUSM_KP_88 NODE_13_length_167178_cov_22.0529, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 70399 29 100.0 32 ............................. GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 70460 29 100.0 32 ............................. ATCTATTCCAGCATCGAGCTGCACCCGCAATT 70521 29 100.0 32 ............................. GTGGTTCGGGCGGCTCCGCGCAAAACCACGCA 70582 29 100.0 32 ............................. CACCGCGTTGCTGTTCCCGCCGGTCGCCGCCG 70643 29 100.0 32 ............................. ATATCGCCGTCGCAGTGGTAGAATCGGTCTTG 70704 29 100.0 32 ............................. CCCGGAGGAAACGTGGCAACAGTTCAATACCC 70765 29 100.0 32 ............................. AACGGAATTCAGTGGAGAGATGGGAAAGGTAG 70826 29 100.0 32 ............................. GCTCTGGCAGAGGGAGAGATCTCCGACTTTTA 70887 29 100.0 32 ............................. AGGACGGCGAGCTGATCGCCGGACACGGTCGA 70948 29 100.0 32 ............................. GGATACAAATCCAAACAGCGAGCCATTTTCCT 71009 29 100.0 32 ............................. TTTATCGGACCGGGCGCGGACACGCAGACAAC 71070 29 100.0 32 ............................. GCGGGTTAGTTATCCATGGTGCATAGGGGCGA 71131 29 100.0 32 ............................. TCACTTGATAGTTTATCTCGCCGCCGTGGCGC 71192 29 100.0 32 ............................. GTGCGGAACAAACCAGTAGGTGTCCAGGTCGT 71253 29 96.6 32 ............................T TTTTTTGACGCGTTCGGACTTCAGGTAATATT 71314 29 100.0 32 ............................. GGTTTACCAGCGGTAAAACAGCAGGAAGGAGA 71375 29 96.6 32 ....................T........ GTCAGATCACGTCAACCACGCTTGATTTTACC 71436 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 71497 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 71558 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 71619 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 71680 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 71741 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 71802 29 100.0 32 ............................. TCTATCGCAACCACCGCTGAGGCGCTGATTGA 71863 29 100.0 32 ............................. CCAATTCATTAAAATACTCTGCAAGTATATCG 71924 29 100.0 32 ............................. CCGCTCCACGGTGAGCGGCTGTTCAATGTAGT 71985 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 72046 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 72107 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 72168 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 72229 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 72290 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 72351 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 72412 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 72473 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 72534 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 72595 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 72656 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 72717 29 100.0 32 ............................. AACGTAATTGGCTTACGGGGCGGTCGGCACAA 72778 29 100.0 32 ............................. TCGCCGCCTGTTTTTGTCTCTTTCCGGGTGAG 72839 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 72900 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 72961 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 73022 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 73083 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 73144 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 73205 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 73266 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 73324 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 49 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //