Array 1 56017-54097 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB908330.1 Prevotella maculosa DSM 19339 = JCM 15638 strain DSM 19339 H164DRAFT_scaffold00012.12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 56016 29 100.0 36 ............................. TATCTGATAATGTGTAGCGTACCACGCAAAGTCAAG 55951 29 100.0 35 ............................. TAACTGTTGTAGCAACCGTATCTGCCTGCAAATAA 55887 29 100.0 35 ............................. TTTGAGCAAGTCGAAAGCAGTTCCCGCGCCGTCGG 55823 29 100.0 36 ............................. TAACGACTTATACCCGATAGCTGGGCCTTTAGAAGC 55758 29 100.0 35 ............................. TACACGCAAATTGATATTCTTATTACGATAACCGG 55694 29 100.0 34 ............................. TAAATAATCCGAATAACTGCATAAAGGTACGTGA 55631 29 100.0 36 ............................. TGATTTAATATTTGGTGAATATATTACTGGTAAAGA 55566 29 100.0 35 ............................. TAAAGTATCGGCATCGTCATATTGTGATATCTTAA 55502 29 100.0 35 ............................. TTTAGTTAAAACAGGATTCAATTTTTCAAAACTAT 55438 29 100.0 39 ............................. TATACTAAGGACAGATATAACTTTTCAGAATTAGCTACT 55370 29 100.0 35 ............................. TAAGGAGAAGCGGGAGGCTATGACAGAGGATGAGC 55306 29 100.0 37 ............................. TTAGCTAATGAGAAATTTGAAAATGCGAAAATTGATT 55240 29 100.0 39 ............................. TTTGTAGATATTAAGTGTGCGGGTCGGTTCAAAACGTTC 55172 29 100.0 38 ............................. TCTGGAGTATTAATATACATAGCTTAGGCTTTTATTAC 55105 29 100.0 36 ............................. TGAATTTATTAGTAAGGAGGAATATACTAAAGTAAA 55040 29 100.0 36 ............................. TACGCGAACAAATTACGAATTTGAGCAGCAGAAAGA 54975 29 100.0 35 ............................. TTATTGTTTACTCAAAGCGTCCCAATTGAGCAAAG 54911 29 100.0 37 ............................. TGAAATAAAACTATCCCAATAAGAATACAAGTACTTA 54845 29 100.0 36 ............................. CAAATGAATTGCCTCGATAATTAGAAGAAAAATATC 54780 29 100.0 37 ............................. CGAAGTTTTTGAAGCGTCTTCGTAAAAATCTGTCTTC 54714 29 100.0 34 ............................. CAGATGTTATATTTTTGTGTGTAAGTGTGTGTGC 54651 29 100.0 39 ............................. CGGTAAATGCTTAACAGTAGTCTTTCGTTCCTGTGTTAT 54583 29 100.0 37 ............................. CATAGCCTCTGCGCATATGTCTTTTTGCTCTTCAGAG 54517 29 100.0 36 ............................. CGTGTCAGAATGTAGTAGACAAATCCAGCGACCTTA 54452 29 100.0 38 ............................. CGACTGATGGACCCGTCCTCTGCAGGATTGAAACCATC 54385 29 100.0 35 ............................. CAAAAGTGGTGTCAGTTCTCATATAATTGTCAAGG 54321 29 100.0 35 ............................. CTCTATTGATGCTGATTTATAGATATGATAGATAA 54257 29 100.0 39 ............................. CACAGTAAAGAGTACATCATTTGCGCAGCTATTAAGAAA 54189 29 100.0 35 ............................. CCACCTATCAGAACCGCACCGGGAACTTGGAGAAG 54125 29 93.1 0 .......................C.A... | ========== ====== ====== ====== ============================= ======================================= ================== 30 29 99.8 36 GTTCTAATTGTACCTTAGTGGAATTGAAA # Left flank : ACCTTTTAAGATGTATTGGTAATTGTATGTGTGTTATCCTGATTTATGATGTGGCAGAGAAGCGTGTTAGTAAAATGCTGAAATTGTGTCGGCAATATCTTTGTTGGATACAGAATTCTGTGTTTGAAGGCGAACTGTCAGAAGTTAAACTACGAGAGTTGCAATATAAGATAGGAAACTTAATTGATAAAAAAGAGGATAGTGTGATAATATTCTCCAATAAAATGGGTTATCATATGAGTAAGGATATTCTTGGCAAGGAGCGGATGTCAACAGAGAACTTTCTGTAAAGTTGTCGATGTGGTAATAAGATTATTTATAGTGTCTTCTAATATAATAGAGTCGCTCTTTGACTTCTTGAAACATATTACAGCAAAAGATATGTCGAAGCCCAACGGAAAATGTATTTTTAGGTATCGACATTTTTTGCTCTTTTTTTAGTACCTTTGTATCGTAGTAAACGGTTTATATATCGACCTTCTCATTTTCTAGAATGATGG # Right flank : ATTTCTTTAGTGGAGAAACCAGGCCATTCCTACACCGAGATTTACATATTTAAAAGGCTCGTTAAAGCAGATGTCGTTATACATGTTTAGCTGCAATCGCGGTGTGACGATATAAGAAACGCCCGTTTCACCCATACAGTTGAAGTGGCTTCTATGACCGGGTCTGGCCCAGTCCTCCTGCTTTTCAGAATTGAAGCGATTATAACTTTCTATGAAAAAGCACCACCTATCCGTAGGCTGGAAGTTCAGACCCGGCACCGAAAAATATATCCGGACGATGCGTCTCACTACTCCATTCCACCCCAATATCATAGCCTATACTGAAAAATTCCGTTATATTATTTTCAAACAACAGGTGGGATTGAACGCCGATATGCTTGGGGAGATAATGAGATTGACTGCTTCCGGGAAGGAGAATTGTCCCAAGGAAGGCTGTTTTCGGCAGGCCTTTCGACCCTTCAAACACTTTTATCTTTGTCCCGACAGATGCATTGGATATG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAATTGTACCTTAGTGGAATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 45144-44748 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB908333.1 Prevotella maculosa DSM 19339 = JCM 15638 strain DSM 19339 H164DRAFT_scaffold00015.15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 45143 37 100.0 33 ..................................... GCCCGACAGCAACACCATCAAAGCCTTTGGGTT 45073 37 100.0 33 ..................................... AAGCGTAAGATAGACATTGAAATGGTCGGTGTC 45003 37 100.0 33 ..................................... GATTAACTTCAGCATTTATTGTTGTCTTATTTT 44933 37 100.0 37 ..................................... TTTCTTTGTTGCCATAATTTTGTAATTTTTAAGGGGT 44859 37 100.0 37 ..................................... ACCGAAGCACCATGTCGTTTCAAAAGGCAACCTGCCT 44785 37 94.6 0 .....................A.............G. | T [44760] ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 99.1 35 CTCTGTGAGTATCTTCCATTAGAACAAGGATTAAGAC # Left flank : AAACAAACCAATAAGACCAGCAACAAATATGTTGTTCTTTGTGATGTATGACATTGAAAGTAATAAGGTGCGCTATCTTATCGCCAAATATCTTGAGCGGCATGGGTGTACCCGTATTCAACGTTCTATCTTTCTTGCCGACCTCGACAAAGCCATATATGATCAAATTAAAGCTGACCTCACTGAGGTGCAGTCTCTCTATGATAATCATGACAGTATCATTGTGTGTCCGATTTCTACCGATCAGCTTCGTGCCATGAAGATTATTGGTTTAGACATTGCCGTCGATGTGATAACGCGTTCTCGGAATACATTGTTCTTTTGAATTAGCATTGCAGCCTTTTGATAAGGAATATTTAACATCATGCTCTTTGGCTTCTTGAATAAAATTATTACCTTTGCACCCGTTTCTCAAGCGGTTAATTTCTGTTAAGGACGGACGAGTATATTGTCTTATACTTATTGAGTTGCTTTATTTATAAGGATACCAAGTCTTTACT # Right flank : ACAGCATAGGTTTGGGATACTATACCATCAGTAACTCCCCTACTTTTCTACTTCGCGGAGCATGTGAAACTACTTCACGGAGCACGCGAAACAATTCCAGCCATATTAGGCGCTAATCTCAGCCATATTGCGTGGTAATATGGCTGAGATTAGAGCGCAATATGGCTGAGATTACGCGACGTGTCGGTCGGCCGGCCGACCGATGGCAGGCAAAGCGCTTAAAAAAATGAAATATGTGCACATTCTATCCATGTGGTGAAGCATCTTTTAATTATTTATATTACCTTTGCATCACTATTTCGAAATAAATCAGTATTCTAATAAATGAAACAGTACAAGTTAGTAGACAACGTGCTGGGTTGGCTCGCTTTTCTGATAGCCGCCTTTGTTTATTGTTCTACGATTGAGCCGACAGCCAGCTTTTGGGACTGTCCTGAGTTTATCACTACAGGCTATAAACTTGAAATTGGACACCCTCCTGGGGCACCGTTCTTCATGCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTGTGAGTATCTTCCATTAGAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //