Array 1 164317-167468 **** Predicted by CRISPRDetect 2.4 *** >NZ_LREG01000011.1 Acinetobacter baumannii strain AB4490 LV49_contig000011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 164317 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 164377 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 164437 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 164497 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 164557 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 164617 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 164677 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 164737 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 164797 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 164857 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 164917 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 164977 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 165037 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 165097 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 165157 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 165217 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 165277 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 165337 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 165397 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 165457 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 165517 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 165577 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 165637 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 165697 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 165757 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 165817 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 165877 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 165937 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 165997 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 166057 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 166117 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 166177 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 166237 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 166297 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 166357 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 166417 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 166478 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 166538 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 166598 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 166658 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 166718 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 166778 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 166838 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 166898 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 166959 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 167019 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 167079 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 167139 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 167199 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 167259 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 167319 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 167379 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 167439 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //