Array 1 12128-14152 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV789067.1 Actinomyces sp. HMSC08A01 Scaffold55, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================= ================== 12128 29 100.0 32 ............................. TGCGATTCGTAAATAGGAATCGGGCGCGGCAC 12189 29 100.0 32 ............................. AATGCAAACCTGGCCAATACCAACCCAAACCG 12250 29 96.6 32 ............................T TCACAAAAGGGGAATGATGTCGGAACAGTATT 12311 29 100.0 32 ............................. ACTGGAGATTACCCCCGGCGACTATGAGATTG 12372 29 100.0 32 ............................. TACTTTCAAATCTCAAGCCTATACATCACATG 12433 29 100.0 32 ............................. CATGCTGCCCCAATACCGACCACAGGCACCCA 12494 29 100.0 32 ............................. AAAAATAATATTATAAAAAAGAAGGGGTTGAA 12555 29 100.0 32 ............................. ATTTTATTATGGGATACGCGTATAACACTAAA 12616 29 100.0 32 ............................. TATCGCGCAGATTATTGCCGCCCTTTTAGGCT 12677 29 100.0 32 ............................. ACTCGAATACGAAGTCATTGATGAGGCCGCGT 12738 29 100.0 32 ............................. AGGCAAGAACAGGCAACCCAAATAGGTTCACT 12799 29 100.0 55 ............................. GAANNNNNNNNNNNNNNNNNNNNATCGCCGACTTGGACGAGGGTACTGCGTTGAG 12883 29 100.0 32 ............................. CGGGTGCAGGCGGGCGAAAAAATAGTTGTGGA 12944 29 96.6 32 ............................T GGTAAATGCCTTGGATGCTTAAAAAGTTTATG 13005 29 100.0 32 ............................. GGGGTCGACATTCCCGGCCGCAAGGCGAGGCC 13066 29 100.0 32 ............................. TTCCGTGGCATAGATGGAGTGATGAATGCCTT 13127 29 96.6 52 ............................T ATCGCCGACTTGGACGAGGGTACTGCGTTGNNNNNNNNNNNNNNNNNNNNTG 13208 29 100.0 32 ............................. GCTGCCTCGCAACGGTTGAGCAGCTGCTCGAG 13269 29 96.6 32 ............................T GTTGCTAATTCCAGGCCCTGTACAGGCAGGAA 13330 29 100.0 32 ............................. ACATGCTCATGTCACCGGCGCGAGCATACATA 13391 29 100.0 33 ............................. GCACATTCACGCACATTCGGCTTTCGGGCTTTT 13453 29 96.6 32 ............................T GTTTATTTCTATGCCGTTTTGCTCATACCAGT 13514 29 100.0 32 ............................. CTCCATGCCACGCTACCCGCAGCTAGGATTTG 13575 29 100.0 32 ............................. AACTACAACAACGGCACCCCGCCTTTGGCCCA 13636 29 100.0 32 ............................. ACAACAACACCAACAGCAACGACGCAACCGAG 13697 29 100.0 32 ............................. TATTAATTTGCTGCCCTGCCTCATTAGCGTTT 13758 29 100.0 32 ............................. GGTTATGAAATACCAAATATCGAGTTTCAATA 13819 29 100.0 32 ............................. CCAGCAAGCGGGAGGGGGGCATTTATGGGCAG 13880 29 96.6 32 ......................G...... CCAGCCCCTCAACCCCTCCTGGTAATCAAGGA 13941 29 100.0 32 ............................. CAAACCCTCATCCTCTCATTCAGCAGAGGCAA 14002 29 100.0 32 ............................. TTCCGCCCAAACTTCTCTACCGTGCAAGTAAT 14063 29 100.0 32 ............................. GCTTCTTCGCGCCAATCACGCCGCGCCCCTTC 14124 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================================= ================== 33 29 99.4 33 CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Left flank : GGTGAGGGCGCCTCCGGCAGCAAGGACGGTTCCACCGGTACTGACGAGGGCGACAACACTAGCGATCCCGGCGCGCAACCCGGCACCGAGCCTGGAACGCAGCCTGGGGCAAAGCCTGGAAGCCAACCCGGTGCAAAGCCTAGTTCGCAACCAGGTGCTCAGCCCAGCGGCGAAGGCAAAAACGCTGGGGGCAAAAACGGCGGCAAGTCTGATGCGGAACGGCAAGCGAGTGAGCCAAAAACAGTCGGCTCGTTCATAGCGACAACTGGAGCGACAGCTTTAGTACCCACTCTGCTAGGAGCCATGGCAATGATTAGCCTGGGCGCAGTTGCAAAACTAAGCCGCAAAAAGAACTGACCGAGGCTAGCGTCAGGGGCTGAGTTGGAGAACTCAGATGGTGCGTTACTAGGCATAGATACGCACCTTGCAGGCGGCAGACTGTAAGATAGCTACCAGCATGGAAGAATGATACAGACGCCCAAAAGCGCAGGTCATTTAGA # Right flank : CTGAGCTCAGAGCAGTCTCGCCAGCAGGTCCTTCTATTCCCCGTGAGAATGGAACAGGGAGAAATTCGATAAATGTTACTCGACCACTGTCGAGTGGCGTGTCACGTGCAGCTCAGATACGTGTAGGAATAATCGTTTAATATGTCATAGCCGTTTCTGTAGCTGTTGCATTTAGTTGCAGTAGCGGCCATTCTTATCTACACCTAACCCTATTGGTTTCAGGCTATTTAAGGACGCTCCCTGCCGTAAGTAGCATGCCCCGTGATTGATTAACGTAGGGGACGCGTCAGCAATCATTCCCGAGTCTTTTAGGCGTTAGAGCTGCAGTTTTTCCTTCACACTTGCGTACCATTGTTCTCGTGTGCCAACAGTGGTGAATTGCTGGCGTCTAGGTGCTAATTCCTGTCCGGGAACATAGTCCTTTATAGTGGCGAACCGTTCTTTAAAGTTGCTGTTCGTTACGAATAGTGGCAATTTCGCGAAATCTTTTGTGGGCCCTA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //