Array 1 152748-155767 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDDD01000003.1 Moorella thermoacetica strain DSM 12993 MORE_contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 152748 29 100.0 36 ............................. CTGCGGTAAAAGTAGTACTATAATCAACAGCAGATT 152813 29 100.0 35 ............................. ATAATCTACAATTATTCCTTCCTTTTCGGCCAGCC 152877 29 100.0 36 ............................. GGGAGATTTTCAAAGTCTCGACGTTATGCTCTACGT 152942 29 100.0 35 ............................. AAACTCCACCGTCCCCTCCTGCGGGTCTAGCACCC 153006 29 100.0 36 ............................. TTTGCCCTTGCGCCCTTGAGTTTTCTGCCCGTCGAA 153071 29 100.0 37 ............................. TTTAAGCTTATCAACAGCCCCGCAGGCAATGGCGACC 153137 29 100.0 37 ............................. TACTTACCCGAAGGTCATTGGCCGCGGTGGTATCAGG 153203 29 100.0 36 ............................. TCGACCGCCTGAAGTCAATTCTCTACGCCAGTAGCG 153268 29 100.0 36 ............................. CCCGCTCTCCCGAAACCCTGACCATCCCCACGGCAG 153333 29 100.0 36 ............................. TCGGAGATTGCTGTATTTGTAAATGGGGCAAAAGAG 153398 29 100.0 34 ............................. GGGTCGTCTTTACCGGTCCGTTAGCCTGCTCCGG 153461 29 100.0 36 ............................. ATCCCCAGGAAGAACGGCTGCTGGCCGATCCTGTTT 153526 29 100.0 37 ............................. AGCTTTTCAATGGATGGATTGCATCGACCGTGTTCAA 153592 29 100.0 35 ............................. TTCTTTTATAGCGGATATTGAAGCTGGACGTAGCA 153656 29 100.0 36 ............................. TAGCGATGACGGAATAGCCCCGTAAACCGTCGAAGC 153721 29 100.0 35 ............................. CCCGATAACGCGGAATGAGTGCCGCGAGTGTGCCA 153785 29 100.0 34 ............................. TGTTAAGGGGCACAAAGTGTTTGTCCCCTTCCGG 153848 29 100.0 37 ............................. GGTTTATAAGCATAAGTTTCCGTGCCGTGGGCCGAAG 153914 29 100.0 36 ............................. AATGGATCGTCTGGCATGGTGAAGAAGAGTACGGCA 153979 29 100.0 37 ............................. TGCGGCATATCAAGCAAAAGAAGTCGATTTACGAAGA 154045 29 100.0 37 ............................. AAGAAACCGGCGACAAATAAGCCGGTTTTCTTTTTGC 154111 29 100.0 35 ............................. TATAAACATCAATTAAATCCGCATCAAGCATTTTA 154175 29 100.0 37 ............................. TCCGGCTCGGAGCCAGGTGGTTTCTTCCGTGACAGGG 154241 29 100.0 35 ............................. TCCTTTTACTGATGACCCTGAAGGCAATATGAAGA 154305 29 100.0 35 ............................. TTACTCACCGAGGTTTCCAGTCGGGGCGACAACCG 154369 29 100.0 36 ............................. TTACGGGGCGTAGGCGGAGAGCCGAAATTCATAAAG 154434 29 100.0 36 ............................. CAAGCTCTCGGAGCTCTTCTCTCAACATTCCCACCC 154499 29 100.0 36 ............................. CTACCAGATCGCTTGAATTCGGAGAAGGTCTTTATT 154564 29 100.0 37 ............................. CTTTTCGTCCAGGTGGTCCAGGCGGCAGGCGTCTTCG 154630 29 100.0 38 ............................. TTCGGGCAGGGAATAAAATATTTCTGCCGGCAAATCTC 154697 29 100.0 35 ............................. CGCTCATGTAGAGGTACTTTTCAAACCCGTTGAGT 154761 29 100.0 35 ............................. CGTCCCAAGCCGCTCCATACGCCACCGGGGTACCC 154825 29 100.0 37 ............................. TACATTGAGCCACCCAGGCATCACGTTCCCTGGGTGA 154891 29 100.0 36 ............................. TCATAACAGTAACCTTCCCTGTAGAGGAATTAAACT 154956 29 100.0 37 ............................. CTTTTCGTCCAGGTGGTCCAGGCGGCAGGCGTCTTCG 155022 29 100.0 38 ............................. TTCGGGCAGGGAATAAAATATTTCTGCCGGCAAATCTC 155089 29 100.0 35 ............................. CGCTCATGTAGAGGTACTTTTCAAACCCGTTGAGT 155153 29 100.0 35 ............................. CGTCCCAAGCCGCTCCATACGCCACCGGGGTACCC 155217 29 100.0 37 ............................. TACATTGAGCCACCCAGGCATCACGTTCCCTGGGTGA 155283 29 100.0 36 ............................. TCATAACAGTAACCTTCCCTGTAGAGGAATTAAACT 155348 29 100.0 36 ............................. CTGGCTCACCGTAATGCGGTATTTGGGTAACTGCAC 155413 29 100.0 36 ............................. TTAGATATAATAGGTTAAAAAGCACTGGAATATTAG 155478 29 100.0 35 ............................. TTTTAATCCCGCCTCTTTCAGTTTTACGGCCATTT 155542 29 100.0 36 ............................. CTGAAGCAATCCCAGGTCCTCATCGGCAAAAACTGG 155607 29 96.6 37 ........T.................... TACCGGGGGCCTTGCTGCGCATAAAAGTCCAACTACG 155673 29 100.0 37 ............................. GGCAGTTGATCAAAACTATCCACGGCCACCTGGCAGA 155739 29 96.6 0 ....T........................ | ========== ====== ====== ====== ============================= ====================================== ================== 47 29 99.9 36 GTGACCATCGACCATAGAGGAATTTGAAC # Left flank : CTGGAAAAGACGATTTTGCACCGCAAGCTAAAAAGGAATATTCGCTATAAAAGTCTTGTCCGGTTAGACTTATATAAGCTTATAAAGCACCTCCTTGGTGAAGAAAAATATTCCCCCATGAAGGTGTGGTGGTAAATATAAGAGTGATCCTGATCTATGATATTAATACTGAAGACAACGACGGCAAACGGCGCCTGGTAAAGATCATGAAGACCAGCCGTAAATATTTATCTCATGTGCAAAAATCCGTTTTTGAAGGAGATATTACCGAAGGGCAAATATCCTTACTTAAGAAGGAAATAATGGCCATAGTTAACATGAAAAAAGACTTTGTCATCATTTATAGCCTCAGGGATGGAGTAAAGCTAAACCGTGAAATCTTGACTGACACCCCCGACCCTACAGATAATTTCCTGTAGTGTAAGTGCAAACTGGCGGTTTGACGCAGGGGCTTTTAAAAAATTGCTAAAATCCCTGTCGGGACAAGCCTTTCATCTGCG # Right flank : CAGGGTGGAGATAAAAATCTGGTGATAACGTCAAAGGTGGAGTAGTAATCGGGCTGGGTACCCGGTTGCAAGTTTTTCAGCAAGAAATGGTGCGACGTATAACTGGTGATAGCGATATAGACTTAACGTTACCAGGTAAGGGAAAGTGTGCTTACTTCATCATCACTCCAGATACCCATGGCGCCTTTGATTTTCTGGCTTCATTGCTGTTCACCTTTTTATTCGTTCGGTTGGTAGAGGTTGCTGATACCTCTCCCAATGGCCGTTTACCGGTGCAGGTTAGTTTTCTTCTGGATGAGTTCGCCAATATCGTAAGTATTCCGGAGTTTGAAAAGAAAATCGCCACCGTCCAGAGCCTAAGACTGAAGACGAACTTAACGATGGCGGAAATCAGGATTACCATGATACTAAGGACCAGAAACCTCTAGAAGAAGGGGCAGAAGAGGTGACGGAAGAAAATATAAAAGAGGGAGATAGGGTTATAGAGATAGAAAACAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCATCGACCATAGAGGAATTTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 54994-59184 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDDD01000007.1 Moorella thermoacetica strain DSM 12993 MORE_contig000007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 54994 37 100.0 36 ..................................... GAGTATTTTGATTGCCCCCTCGGCCCGGTTACCATT 55067 37 100.0 33 ..................................... TCCCTATCAGGCTCAGCACTTTAGCCCTATTCC 55137 37 100.0 35 ..................................... ACCTTTCCGCAAAGCGGCTTTAAACTTGTCGACAA 55209 37 100.0 33 ..................................... CGGCGACGAGATTCCTCGGTGGCGGTGTATGGC 55279 37 100.0 34 ..................................... TAGCCAACCGAGACGGCGAAAAACTCCTGTTTCT 55350 37 100.0 35 ..................................... ATTTAAATATTGAACTTTATATTCTGGCATCGAAA 55422 37 100.0 35 ..................................... ATCTTACGAAACAGTGTCTCGTCCATGTTGCCACC 55494 37 100.0 36 ..................................... CTTAAAGGCAGGTAATCGATACCTATATCCAACTCC 55567 37 100.0 34 ..................................... TTTAGAGCAAATGACTTAAGCCGGGTACAGGAAA 55638 37 100.0 34 ..................................... TTCCCATATATCTTCAATCGACGATATATCCTAC 55709 37 100.0 33 ..................................... TTTTCTGCTAAGCCACATTGTCCTCATTTCTCG 55779 37 100.0 38 ..................................... AAGCCAATCAACTTCTGATTTTGTAGAATTAAATTTAC 55854 37 100.0 35 ..................................... CTGACTGTTATCAACCCTGCCACCTTCCTCTCCTG 55926 37 100.0 34 ..................................... TTAGTGATATGCCCTTGCTGTGATACTGCTTTTT 55997 37 100.0 34 ..................................... TCAATGAAGAAACGCCTGATGAAGTTGGAGATGC 56068 37 100.0 33 ..................................... AAGGATTCGATGTTTATTTTATTGGGTTTTCGC 56138 37 100.0 35 ..................................... AAGTTTTAGTCCTTTTCGTTGTACTCGATTATGCC 56210 37 100.0 34 ..................................... CCTTCAGGCACAGCGCTTAAATCATATCTACCTG 56281 37 100.0 35 ..................................... CTTGTTGGCCTCAGTAGCGATGCCGATATGAAAAA 56353 37 100.0 34 ..................................... TCTGCATCCGGGCGGCGGGGGATTGTAGAACTTA 56424 37 100.0 35 ..................................... TCTTGCATTGGTGGGAACAGCGAGGCTATCCAAAC 56496 37 100.0 33 ..................................... CTTTTTCGGCTGCTGGGATTGCTGTTGTGTCGC 56566 37 100.0 34 ..................................... CGGCAATATAAGTGGGTCAGCCAGGGCATCTTGC 56637 37 100.0 33 ..................................... CTTTTTCGGCTGCTGGGATTGCTGTTGTGTCGC 56707 37 100.0 34 ..................................... CGTAATATGAAACCTAAGACTAAAATAATCCCAT 56778 37 100.0 34 ..................................... TTTTATCCAGTCTTGTTTATTGTAGAGCTGTATC 56849 37 100.0 35 ..................................... ACAATAACGGCTTACGACCAGCTTATCTACCTGAC 56921 37 100.0 34 ..................................... AGCATATGGCTGTCCACGCTATCAGGGACAGTCG 56992 37 100.0 34 ..................................... TTTGATGCTGGACGCCCTGGACATGCGGATGCGC 57063 37 100.0 35 ..................................... CTCAAGGACGGGTACGATGCGGAAATCGTAGTGGA 57135 37 100.0 34 ..................................... AGCAAACAGCAATCGGCCCAGCAGTTTGAAACGG 57206 37 100.0 35 ..................................... ACCGGAGAAGCCGTTTTCACCACCCGGGAAGCCCG 57278 37 100.0 37 ..................................... CATCCAGCGCAAAAAAGACCGGAGGGGGGGTGAGCGG 57352 37 100.0 34 ..................................... AGCAAACAGCAATCGGCCCAGCAGTTTGAAACGG 57423 37 100.0 35 ..................................... ACCGGAGAAGCCGTTTTCACCACCCGGGAAGCCCG 57495 37 100.0 37 ..................................... CATCCAGCGCAAAAAAGACCGGAGGGGGGGTGAGCGG 57569 37 100.0 35 ..................................... AAACTTTAACCGCCCCCGCAAAAACCTTATCTCCG 57641 37 100.0 34 ..................................... CCTCCTCCGTTTTCTCCCCCCGCCCCCGGGTGTC 57712 37 100.0 34 ..................................... CTACCTCCGTTACCCCGCCAGTAACGGCCACGGC 57783 37 100.0 34 ..................................... TTAGCGCCGTCTGGCTCTCGGTTGGGTTGTAGTA 57854 37 100.0 36 ..................................... ACGGCCTCTTCATAGGTATAGCAGAGTACCGGCCTG 57927 37 100.0 35 ..................................... GAGGGTGCGTTTAGGCGGAGGCGACCTAAAATTGC 57999 37 100.0 36 ..................................... GAGGGGCCGGTGGGTATCGAGGTAGATGCCTATATC 58072 37 100.0 34 ..................................... AAGCCGTTCGTACTCGGCGGCCAGGGCCTTTTCC 58143 37 100.0 35 ..................................... ATTAGCTATTTCAACATCGGTCATCCCTGCGGCAT 58215 37 100.0 36 ..................................... GTTTACTTGAAGTAATTGATCGGGTTGACCGGCTGG 58288 37 100.0 34 ..................................... AAGCCGTTCGTACTCGGCGGCCAGGGCCTTTTCC 58359 37 100.0 35 ..................................... CTGGGTAACACGTGACCATATATCTCCAGAGTAGT 58431 37 100.0 34 ..................................... GATATGCCGCCGCTGCATTTCGAGGATGGCCTTT 58502 37 100.0 34 ..................................... ATGGTACGGTTGACCTAAAGGGCAACGTTTAATA 58573 37 100.0 34 ..................................... CAGGGTGGTGATGGCTTCCAGGTCCTTCTCCCCC 58644 37 100.0 36 ..................................... TTTAAACCCGATGCCGCAGCGTTTAGCGCCCGCGCT 58717 37 100.0 35 ..................................... CCGCCACCCGGCCACCAGTTTGCCGTCGATTTCCT 58789 37 100.0 34 ..................................... ACCTGGCCTGCCTGCCCAGGTTGCTCCGCCTGCC 58860 37 100.0 35 ..................................... ATGGTCTACTCTTCGCAATTCTTCTGCGAACTGAA 58932 37 100.0 35 ..................................... CTTCAGACGTTCGTGAAATATAGCCATATTTATCC 59004 37 100.0 36 ..................................... ATGCTTCCCGCCTCCCGACCCAGGCCTGAAGTTCGT 59077 37 100.0 34 ..................................... ATATAATCAGCTTTGTTGCCAGAGGTGCCGGGAC 59148 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 59 37 100.0 35 GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC # Left flank : CCGGTAAATATATCGCTTTTCTTAAGTGGTGTAGGTAACATGTATATTTTAATTACTTATGATGTTTCTACAGAAACAGAGGCAGGTAAAAAACGCCTGCGTAAAGTTGCCCAGGTATGTAAAGATTTTGGTCAGAGGGTGCAAAAGTCCGTCTTTGAGTGTTCGGTCAACGAAGCCCAGTTTGAACAGTTAAAGCACCGGCTCTTGCAGTGTATCGATGAAAAAAGCGATAGCCTGCGGATTTATCGACTGCGCGAACCCGCAAAAAAATACATCCAGGAGTATGGCGTCAACCTTACGATTGATTTTGACGCCCCCCTGGTTTTGTAAACCCGCGAACATATAGCAAGGGGCAAAAGGCCGAAAGGTTCGCGTTCTTTGGGAATCAAGACCTGAAGCTAATTTTAGAGGTGAAGCATAATGAAGTATTCTAATTTAGTCATCAGGTTCGCGCAGAGTAGTAATATAGGGGTTCTCCGCCAAGGGTTTTAGCGCGAACT # Right flank : CAGGACGGCCTCAACGGCGTAGCTTGGGTAGATGAGTTACGCCCGGCTATTACGCCCAGCTTACATTGATCGCAATGCTCTCCTGCTCCACCCATTTGCGGTGCTTCAGCATAGCCTGCAGGAGGGGGTGCCAGGGGGCGTAAGCCGGGTCCTCAGCCAAGTGCCGGAGCCTGGCGGCATACTCGTCGCCGAAGGGTATTCCGGCCGGCAAATACCTGGTATAAGTAGTGACATCCATAAGGTAGGGCTGCAAATCGGGAATTAAGTTGCGGCGGATATATTCGCAAATGCGGATGCCGCCGTAGTCCATATCGCCCCAGTGGTAGACCGGGGGCCTGGCGGTGGCTCCAGGGGATTCCCGGTAATCCTGGAGCCGGCGTAAAAAAAGCTGCACGCCGCGGTGGGGGAAGCCGCCGGTATATACTACTAAGCCAGCAGGGCCCTCAACCGCTAAACCCCGGCCCCCTCCCCCTTCCCGGCAAGGTACAGCCAGCTCACTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-17.20,-16.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //