Array 1 512272-513686 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNZF01000001.1 Paenibacillus polymyxa strain KF-1 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 512272 30 100.0 37 .............................. GAACGTATTTTCGACTCGGCCATAAGTTTGGTTATTC 512339 30 100.0 36 .............................. CTCAAAAATATTACCATACATGAGTTTATTGTGTTG 512405 30 100.0 36 .............................. GGAGTTTGCTCCAGCTCAGGCGTTTGCTTCAGCTCA 512471 30 100.0 36 .............................. TGTTTTTCTGATGTTGTATAACTCGATTGAATTCCT 512537 30 100.0 36 .............................. CTAATATAGATATTCGCGTGCGGCTTGTTATGAATG 512603 30 100.0 36 .............................. CAGTGTACCAAAAAGGAACTAGCCCAAGATACAAGC 512669 30 100.0 36 .............................. GTAGACTTCCAGATTAGCGGATAGTCTTTTATTTGT 512735 30 100.0 36 .............................. TACTAGCGGTCGTCGTTTTCCCGGCTCCTAGGTTCC 512801 30 100.0 35 .............................. CCTTTAGGCACTGTGTAGCTCCCGTCCATAGACCG 512866 30 100.0 37 .............................. TCGCATTCCGGTATCGGTAGGAACCATCAGAGCGGCG 512933 30 100.0 36 .............................. TGTTAATTGTTTCGGTGTTGATCCCCATGTCAGCAG 512999 30 100.0 36 .............................. TTTTGGGATTGGAATAACCCCAGTTGTGGGAACTGG 513065 30 100.0 36 .............................. CCTGCTTGCTGAACAGATCGGGCCTTTGCCGAATTA 513131 30 100.0 36 .............................. TGTTTTTGCATGTATATATCTCCTTTGGTATAGGCG 513197 30 100.0 36 .............................. GATACACTAAGTTGAGAGGCTATATCTGTGAGACGT 513263 30 100.0 36 .............................. CTGCGATAACCGTTTTTCATGTACTGTTGTGCTTTG 513329 30 100.0 36 .............................. TATAGATGCCTTCGTTTTCTGCCCTATCAAACGTAT 513395 30 100.0 36 .............................. GCGTAAATTCTACCGGATACGTACCAGCCGCAAAGG 513461 30 100.0 37 .............................. TAGATGAATGAACGTTGGTATGAATTACTGGCAAAAT 513528 30 96.7 36 ...............T.............. TCCATAGTGTATTCAAGGACAGGCCATTCTGTTTCA 513594 30 96.7 35 .............G................ GCGAATGGGCTAAAAACTACCAGTGTGACAGCCGT 513659 28 90.0 0 .......--....................A | ========== ====== ====== ====== ============================== ===================================== ================== 22 30 99.2 36 CTTTAACCACAACATGTGATGTATTGAAAT # Left flank : TTGTAGCCCTCCTTGGTGAGTGCTTTAAGCAGCATTTCAGCAATAGATAGATCGTCTTCAATAAGTAAAATATGCTGTGGCATAGGTGTGGAACACCCCTAATTTTTAGATTAGCTCGTGTGGCGAACTGTATCTGAATTATATAGAGTGGTGGAGGGGATTTCCATAAAAACTATTCATTGAAGTTGAGTGGGGAATGTTCGCAGGAGATTTAAAAGGGTGTTTTTTCCCGATGCATTGGCTTTATTTCATGAATGAATCTCAACGGTGTACATCCAGTGATGTTCCTAATAAATTAAGGTATTTCATTAAGCGATGTAGGTGATTTTTTCCCAACCCCTTAAAAGGGTGAGACGCGGAATTTCTTAGAGATGCAAGGGTTTAGACGTTTTTCTCTACAATTTGAGGGGAGGGGTCGACGGTTGGGAAAAAATTGCGAAACCCTTATGGCTGTAGTAAAATAACGACATTGCGATTTTGGAAAGCTTGATTTTACTAGC # Right flank : ATACTCGGCCTCGTTTCTGCAAAAGTGCTTTTTCGATGCTCGACGATCAAAATTATTTGCTTCATCCTTCCATGAACTCCATTCTTTTTATTGAAAAAACCTCCTAAGCCACTTAAAGTGGTCAGGAGGTTTTTGACATTTGCATGCATTTGGGTCAGCTACTAATTGGGTATTCAGAAAGAAGTAGCTCATAGCCATTAGTAAGAATATTTCCGAACAAAAAGTAAAAGAAACATCGGATGTTACGGTCATAGTCTAGTTTCAGTATTTTAAAACTAGAAATATAAATTTAAATACACAAGTGTTTTATTCATTATGCGCATTATTTTTTTCTGAGGCATTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCACAACATGTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 514921-515875 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNZF01000001.1 Paenibacillus polymyxa strain KF-1 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 514921 30 100.0 36 .............................. AGTGTTTATTGATGAGAGGGATAGCGTCTCACCGGA 514987 30 100.0 36 .............................. TCCATTCAGGCAATCTTACACCCAAATTGATTCTTC 515053 30 100.0 36 .............................. TCGCCTGGCAAAACCATTTGCCCTGGCGGATCTGCT 515119 30 100.0 37 .............................. AAGTTTTAGCTGGTTTTTTCAAAGAGGTTTGTGGATC 515186 30 100.0 36 .............................. AAACTTTATCCGCATGATACATTTTGTTCCTGTTAA 515252 30 100.0 37 .............................. GACAACAAACCGCTTTCCGGGTCCATCAGGTTCTTTT 515319 30 100.0 37 .............................. CATCGTAACCGGACACCGTTTTTAAGGTTAAAGTCGG 515386 30 100.0 36 .............................. TTCCTTTCTTTGCTCCTTGCGTGATTGCCGTATAAA 515452 30 100.0 36 .............................. AACAATGGTTGCAGCAGCCAAAGCAGGCCACTCATA 515518 30 100.0 36 .............................. GGTTTTCATTACTGAATATCAAACGTGCCTCCTTGA 515584 30 100.0 36 .............................. ATACACTGGTGGGGTCTTGCCTGACAAATCGTTTAG 515650 30 100.0 36 .............................. CACTGTTGTGAGCTGCCGCCATTGTCGCCACCGCTG 515716 30 100.0 37 .............................. ATAGTAGGAAGGACGATATCATCTTTTTTATATTGGG 515783 30 96.7 35 .................A............ GCGAATGGGCTAAAAACTACCAGTGTGACAGCCGT 515848 28 90.0 0 .......--....................A | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 99.1 36 CTTTAACCACAACATGTGATGTATTGAAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAATTTTGAACACATAAATTATTCGTCCGCTTTCC # Right flank : ATACTCGGCCTCGTTTCTGCAAAAGTGCTTTTTCGATGCTCGACGATCAAAATTAATTTAGCTTCATCCTTCCGTGAACTCCATTCTTTTTATTGAAAAAACCTCCTAAGCCACTTAAAGTGGTCAGGAGGTTTTTGACATTTGCATGCATTTGGGTCAGCTACTAATTGGGTATTCAGAAAGAGGTAGCTCATAGCCATTAGTAAGAATATTTCCGAACAAAAAGTAAAAGAAACATCGGATGTTACGGTCATAGTCTAGTTTCAGTATTTTAAAACTAGAAATATAAATTTAAATACACAAGTGTTTTATTCATTATGCGCATTATTTTTTTCTGAGGCATTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCACAACATGTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 3 517197-518465 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNZF01000001.1 Paenibacillus polymyxa strain KF-1 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================ ================== 517197 30 100.0 36 .............................. TCAGGTGAAGCAGACCAAGTCACTTGTGCGGTGTAC 517263 30 100.0 37 .............................. CGAATACGCGTATCCAAGCGGTTTATACTTGGCGTAG 517330 30 100.0 36 .............................. TGATCAGGCGAACACGAATGTCTATATTCGTGATAT 517396 30 100.0 36 .............................. ATTGTTTCTCTAGCGTTTTCCGCAGTTAGACAAATG 517462 30 100.0 35 .............................. TTTGGTTGCGTGACAGACGTGTTTTCTGCTGCAGT 517527 30 100.0 36 .............................. GGATAAAAATAAAATGCTGGAGGTTATCAGTTATGG 517593 30 100.0 36 .............................. CCTCTTGAGCAGTAGCATACTTAGGTTCTTTTTCTT 517659 30 100.0 36 .............................. TAGTCAAAATAGATGATTTCGTGATCAGGCGGGTTC 517725 30 100.0 37 .............................. ATGGTAAATGGCTTGTCTTCCGAATAGTCCGGCTCAA 517792 30 100.0 36 .............................. TTAATGACTCGAGCAGACGTGCCGGCAAGATGCTGG 517858 30 100.0 36 .............................. TTGCCGAACATATCGAAGGCACTGACTGTATAAGTG 517924 30 100.0 36 .............................. GCAGATCGGTCGTCTCCTTGAGCTTCTGGTTATCCT 517990 30 100.0 36 .............................. ACGCAAATACGCTCCAGTTGGAGCACGGAACGACCC 518056 30 100.0 92 .............................. CCAGAAACCAATTCATTGCTGGGGTCATAGAAGTACTTTAACCACTAAGGCAACGACTACGGCGTCGCTGCCCGGTTCTCGTCATAGAAGTA 518178 30 96.7 36 ...............A.............. ACCGCTTCGGTATTATCCGTAAGCATTTTTGAGAGA 518244 30 96.7 36 .......T...................... CGATATGCCTCGATAGCTTTTCTAGCATCTTCTGCA 518310 29 86.7 33 .............G...A.......-..G. TTTGGTCAATTTCGTCAAGTACATCATTCATGG 518372 29 96.7 36 ...............-.............. TCGGTTGCGCCAGTCAGCGCTTGAATCGTAGACATT 518437 29 90.0 0 ...A............-.......C..... | ========== ====== ====== ====== ============================== ============================================================================================ ================== 19 30 98.3 39 CTTTAACCACAACATGTGATGTATTGAAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGCAAGGGTGCAGTATTACTGTCTATTTTTTGT # Right flank : TAAAAAATTGTACGTGTCATTTATTTTGGTTGCTATCCTTCAACTTCAACATAAAACGTACTGAGTCCTAAGCAGTAGGGAAGAATTGTTCTGGAGAAGCGTAAGCGTCTATCTTTATTCCGATTTTAATCCTCGAAGGGTTTATACAATCCAGAAAATCCAGAAAATCCGCGGATAACAGCGACCGGAAGGACATTCTGCACGTGTAGCAATTTAAATACCGTTGCATTTTGTTATAAAAGTATAATTATAATGAGAAATATATTTACAAATCATGGAGCGAGGTCTATACTTTATATCAGATCAGGAGGTGGACGTATTGTATTATGAAATTCACATAACAACGTTAATTAAACAATCATCTCATCATCTGGAGATACCGGAGCGTATCGGAGCCTGGATTGGTCGGGCTGGGTTGAAGGACGAAGCGTTGAAGCAGACGCACTACGACAAGGACTACAAGCACTATACATTTGGGTCGCCTTTTCCGCGTGAAAAGG # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:-0.25, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCACAACATGTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 4 526486-526779 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNZF01000001.1 Paenibacillus polymyxa strain KF-1 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 526486 30 90.0 36 TAA........................... TGCTTTGCGCCACCAGCTTTAGGATTGGTTACTGTC 526552 30 96.7 36 ..................T........... ATCCATGCTTCAAAAGCACGGGCAGATAATTCCTCA 526618 30 100.0 36 .............................. TAATTAGGATCAGTGCCACCAACAAGAAACTTATCT 526684 30 100.0 36 .............................. TAAAAAATCTGATCGGCTTATTTTTCCGGTGGGTGA 526750 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 97.3 36 CTTTAACCACAACATGAGGTGTATTGAAAT # Left flank : AGAAAGAATGATTCGCTTGTCCGTGGTGCGTGCTCAAATGAATAACTTTACTTTTATTTATCCGGTTCCCCACATGTATGCAAAATGGGGAAAGGTAAAGCCAGGGATATACACTTATAGTGTAGGTACTTTGTATTTCGTGGAGCAGGGTGAACAATATATGGATATGGACGAGAAGACGAATACCAAGAAGTTTAATCGTGCCAGGTATAAGGAAGATGAAGAGAGGCTTTTGCTATGAGAATTACCGGAACGATGGTGAACTATTATGTACACTGCCGTAGGCAATGCTGGTTGTTTGCCAATGGAATGGGTTTTGAAGATGATAGAGAGGACGTGCTGATCGGCAAGGTCATGCATGAGCTACAGAGTGAAGGGAAGAAAAACCGCGAAGTCGCTATTGAGGGCATCAAAGTGGACAAGCTGACCAGTGATTATGTGACCGAGATTAAAAAGTCTGACGCCGATGTTGAAGCTACTAAGTGGCAGACGCTTTACTA # Right flank : TTATGATCCGGGTGCGGGTGTTCCAAAAGTCGACTTGTCTTTAAGCACAACATGTAATCAAATTACTGACAGTTGAAATTCCCTTATATTATACTGAAAGAGTTTATAATCCGATGTTTGGAATACGATGTTATGATATACGTGCCATGCTTTATGCAAGAAATCAGGTATGTCTAATCACGAGCTGCGGTACAAGATCGTCAATAAAGGAGAGCAATGATGTTTGTTATACGGGGAACAGAAAAACTGCTGAAGGAATGGGAGACTGAACCACTTCAAGTTGATATTTATCCGCCTTTGAATAGTTGGCATGCCAGCTTGTTCTTGCTAAATCGCAGAAAAAATATTGTGTTTATGCATGATATTTCCCGCTTAAGCGTCACGCTGTTTGGAATTAAAAAATCGCAGTACAAAAATCTGCCAGCTCTTTTTGTACAAACCTTGAAGGAATTAATGATCAGCGAAGGGTTTGATGAACAGATCGTTAAGGCATACATACA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:0, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCACAACATGAGGTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : NA //