Array 1 30194-28701 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFFN01000005.1 Bifidobacterium catulorum strain MRM 8.19 DS8229455_c5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 30193 29 100.0 32 ............................. AACATGTTTGATTGCAACGTCACGTAATCAGG 30132 29 100.0 32 ............................. GTCCCCGAGGCCCCGTCGGCGTCGGTGACGAC 30071 29 100.0 32 ............................. TCCCACACCTCGGCACCAAGGGGCAGGCAATC 30010 29 96.6 32 ............................T CATGAGCGGGCAGAACGTGGCCGACATACTGC 29949 29 100.0 32 ............................. AAGATCACGGTGCATGGCGTGAAGGCCGGTGC 29888 29 100.0 32 ............................. ATCCATAATAGCCGAAACGAGATTATTCAGGC 29827 29 100.0 32 ............................. ACGGTGGAAACCCGAATACGCTTCGACCGAGG 29766 29 96.6 32 ............................T CTGGTCTGTGCCGCGATGGCCGGTTATCTTCG 29705 29 96.6 32 ............................T TGCGATCTGTCCCACAAGAGGCCCGCCGCTGG 29644 29 96.6 32 ............................T GACGCCATCGATGATGTTCTGCCTCGCGTCCG 29583 29 100.0 32 ............................. AGTGGTTCATCGACATGGGAAACCGTCTTCAG 29522 29 100.0 32 ............................. GCCGCATGGACCGCCTACGAGACCGTGGCCGC 29461 29 96.6 32 ............................T GGCTCGCCGGGATCAACCCTGGCAAGGTGCGT 29400 29 100.0 32 ............................. GGCATGGTGTGCGGCGTCATGGGCTCGGGCAA 29339 29 100.0 32 ............................. AAAATCGCTCACACCAAAAAGTACCCCTCATT 29278 29 100.0 32 ............................. CGTAGACGCTGAAGTCTCGTGTGAGGTTCAAC 29217 29 100.0 32 ............................. GCCGCATGGACCGCCTACGAGACCGTGGCCGC 29156 29 100.0 32 ............................. CGTCAAAAGCGGCGCCATGAGCATCCAGGGAT 29095 29 100.0 32 ............................. GTTCTGGTCTTGCTGTCGGCGAGTTCGGAGCC 29034 29 100.0 32 ............................. GCGATGTGGGGACCCGCACGCCGTACATGGTA 28973 29 100.0 32 ............................. CGGTAGGATTTCGCCCGCGCCTGTGATGTCGT 28912 29 96.6 32 ............................G CTGCTGGCGGTGGCGAGGATTCGTCTGCCGAG 28851 29 100.0 32 ............................. ATCGAACAAAGCTGGATTGAGTTTGCCGATTA 28790 29 100.0 32 ............................. GATATGTGAAGCCGCCTGCCGACGCCATGCGC 28729 29 93.1 0 ..........................T.T | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.9 32 GTGTTCCCCGCATACGCGGGGATGATCCC # Left flank : CGATGATCGTAGTCGTGTTGACCGCATGTCCGGTGGGTCTGCGAGGGGATCTCACCAGATGGCTGCTGGAAATATCCGCAGGGGTGTTCGTCGGTCATGTCAATGCAAGAGTCCGCGATAAACTATGGGAGCGCATTGTGGGATTGATGCGTGATGGACGAGCGATCATGGTGTATTCCGCAAGGAATGAACAGCACTTCGCCTTTCGTGTTCACCGGGCTAAATGGACGCCGGAAGATTGCGACGGACTGACTCTCGTCAAGAGGCCTACGGCAGATGCTCAGTCTGAATCTTCGCGTCGTCGTTCGGGATGGAGCAATGCCGGTAAACGAAGAGCGGCACGAAAATATCGATAGATATTAGGGCACTCGTAGGCGGGTGTGATGGCGACGGTGATTTGCGGAATCGGCCTGCTGGGGAGATTGACCTTTATCCGCGAAAGTGAATAAAATCGGAAGGAGGCGAAATCAGTTTCGTTGGAAACATTACGTTTCCGAACT # Right flank : GACAGGAAAACCTCGTACTATGCATAACTAGTGCTCCTCATACGCGAAATTGTTTCTGTCATCTTTGGCGAACGGAGTTCGTGGTAAGAGACACGGCGAATCATTGACGATTCCGTCTGCATGTCGAATGTCGACCATTTGTTGTGTGACAAGGGTGCAGCATGGGTGGACAGGAGGCGGCTCCGACGTAGTGACAGCTATGTATCCATACGCTGATAGCCTTGCGGAAAGCCTTGTATGTATGAATGCATGATGAAATGCATAGCAAAGGAGATCATCCATGACCGAACAGTCCGAACACCTCGCCCTGTGGGGCGGCCGATTCACCTCCGGTCCCTCGCCCGAGCTCGCCCGCCTGAGCAAGTCCACCCAGTTCGACTGGCGTCTGGCCGACGACGACATCGCCGGTTCTCGTGCGCACGCCCGGGCGCTAGGTCGCGCGGGACTCCTCACCGATGACGAGCTCGCCCGCATGGAAGCCGCCCTTGACGAGCTTCAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //