Array 1 7717-7877 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFTE010000040.1 Clostridium estertheticum strain CF007 contig00040, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 7717 30 100.0 36 .............................. TGTATCATTAGAAGTTTTAGCATGGAAACCACAAGT 7783 30 100.0 35 .............................. AAAAACCAAACAGGAAATGATAATGTATCAACATT 7848 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 100.0 36 GCTTAAACAATACCTATGTTAAGTCTTAAT # Left flank : AGTAAAAAACACAATAAAAGAAAGGAATTGTCAAGATTTATGAGGGGGCAGCCCGTAGGGAGATTCCTCGTCATTCTTTACAAGGAATGAATTGTTAGTACAATCATTCTTCCCCAAAGACCTTGAACTTGATTTTGATCTTGCGTCAGGAGCGTAGTAGAAATGAAGTGATATTTTATATTAGTAATTCTTTTTTTAAAATTGGTTGTCAAAACTATTTTAGAAATTTAGAATTCCTATATAAAATATTGCTTTATTGGAACGAAGTCTCCGCTCGGACGCCCGAAGTAAAACCTTCATTGGTAATGATATGAAAATACAAAAAATAAAAAAACCCACACCCAAAGGCATAGGAAAACTTTTCATTTAAACAGGAAAAATATATAATAGCTGCTAACATAAATATTCATTAAAATAATTGAAAACTAACTTAACCCATGTTTTTCAACATTTCAAACATATCATCAGTCTCAATATTAAGACAAGGTATAATGTTGTCC # Right flank : TCATAGTATTTAAGCTAAACTTAACATTAAAATTGTTTCTATACACCCTGTTATTACTAACATCTGTATAAAATTTCCCAACTAAATTGGAGGTTTACCGAGTGTTACCATGTTGCTATGCAATCTTATTGGTACTTCTCGATTCTAAGACGTTAAGTCGCCTTTTATGGTTGGTAAAACTATTTAATTTTCAATTGTTCTTTAATTAGTTGTTCAATATTAGGTAAAGAGATATTTTTAGCTGCGTTAATATCCGCATTTTCTTCATAACCACAAACAGTACATTTAAACCTTGACTGATTATTTCTGCAATCTCTATTTTCTTTTTGGATATTCCCACACAAACTACAACGAAGTGAGGTGTGATAAGGTTTTATAAAGTTTATAGCCAACCCATTTTCCTCTGCTTTATATTTAATTTTTGATTGCAAATCAAAGTAGCTCCAATTTTTTAAAAAAGTTTCTGAAACACTTTCGCTATAACCGCTTAGGTCTTCCAT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTAAACAATACCTATGTTAAGTCTTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 11918-16333 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFTE010000033.1 Clostridium estertheticum strain CF007 contig00033, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 11918 37 100.0 35 ..................................... ATAATAAATGTATGTACAAAATGTATGTACAAATG 11990 37 100.0 35 ..................................... TACATTTTTTCAACTCTGATCTCAATCGTTTATTA 12062 37 100.0 35 ..................................... GAGGTAAAATGCCCTTTAACAGTCCGTGCATATGC 12134 37 100.0 37 ..................................... CCGCTTGATGGACTCCTATATGAGCATATTTTTCTGC 12208 37 100.0 36 ..................................... TGAATCTTATTAATTTCATATTGTCGGGAATTCATT 12281 37 100.0 36 ..................................... CGCAACTATGTCATTGAATACGCCTCTAGTTGCTGT 12354 37 100.0 36 ..................................... ACCAGCTTCGCTATATTGCCACCCCACACTTTTTAT 12427 37 100.0 35 ..................................... AGTAAATAGTCCAGTTAAACCAGTAGCTAGGTTAT 12499 37 100.0 35 ..................................... TAAATTTCTCCTTCTTTTTTATTTTTTTGAATGCA 12571 37 100.0 36 ..................................... TAATTAAATTGCGACTAGGGTAAAATCTTTTTTTAT 12644 37 100.0 39 ..................................... TTTCAGAAATAGGGTTTCTTACGTTTATTTTTGCACTTT 12720 37 100.0 37 ..................................... GGTATGCTTACCAATTACCTTTAAATAAAAAAATATT 12794 37 100.0 37 ..................................... TCTGCTGGTTATGCAGTTACTAAAGTTGGGGCCACTG 12868 37 100.0 35 ..................................... TTTAATACCTTCAGGTAACATTGTGTATTTAATCA 12940 37 100.0 35 ..................................... TCAAACATACGCAGGCACCGCTACAACCTATATAA 13012 37 100.0 35 ..................................... AATAGCCTCTTCATGCATCCCATCACTTCTGTAAC 13084 37 100.0 36 ..................................... CAATGTATTTTTTATTTTGTATCATAATATATTGAG 13157 37 100.0 35 ..................................... TTATCCTCTATTAAGTCCTCTGTAGTAATATCTTG 13229 37 100.0 38 ..................................... AAATCAAGCTTAAAGACATCCATATCATCATTCATTAG 13304 37 100.0 37 ..................................... TCATCAGGTTTGCTAGGAACACCACAACAAACTGATT 13378 37 100.0 36 ..................................... GTAAATTAATAGCACCCAATACATGATAATTAGAAT 13451 37 100.0 35 ..................................... TCATAGCTTCCTCCATTTGGTGATTTTTTAGCTAT 13523 37 100.0 35 ..................................... TTATATCTTCATCGTTTACCAGTGGAGCATACCTT 13595 37 100.0 36 ..................................... TACTGTCTTTGCAGTACCAGCAATAAAATTATATGC 13668 37 100.0 35 ..................................... CCATTATTCTAACCTCGCTGGTATATCTTGCAATT 13740 37 100.0 37 ..................................... TATCAATAAAGATAGGTAATGGTTCTTGGATTGGCGC 13814 37 100.0 35 ..................................... AATACAATTCGCCCTGATCCATATTTCTATATTCA 13886 37 100.0 36 ..................................... CTGTTTAGTCTTTCAGCAACAATATTTATTTCATAT 13959 37 100.0 37 ..................................... TTAGATATTTATGTCAAGAAATAGATCCTGGAATCAG 14033 37 100.0 36 ..................................... TTAAATTATTGTCTTTTATAACCTGCATTGTTACTG 14106 37 100.0 35 ..................................... TGAAATCTGTATTCCTTATGCATCCTCTTTCATCA 14178 37 100.0 35 ..................................... TAATAATGTGGTTAGTATGTTTGAATATAAAATTA 14250 37 100.0 37 ..................................... TATATTCCTTTTCCCCAAGTGGTTCTAAAACAAGTAT 14324 37 100.0 35 ..................................... AAATTTCGTTAAATCAGGTAAAGGATTAGTGTTAA 14396 37 100.0 37 ..................................... CATTTCACACTTAAGACAATAGGAATCATATTACCAG 14470 37 100.0 35 ..................................... TTAAACAAATTTATTTCTGCAAATGATGCTGCAAA 14542 37 100.0 37 ..................................... AAAGTATTTTGTACAAATGTATCATTTATATCCTTTA 14616 37 100.0 35 ..................................... GCAAGTGGTGCGCCCATATACAATGAACGACTACG 14688 37 100.0 36 ..................................... TATATAAGAATTTCCAAGTAAAGTAACTTTGTTTAG 14761 37 100.0 34 ..................................... AAGTATTCTATTAATGTTTTAAAGTCCCTTTTAA 14832 37 100.0 37 ..................................... TATAGAGGTATCTATCTCTTACATAAACTTCTGGTAG 14906 37 100.0 35 ..................................... ATATCAGCTTATTTTTATATTCCGTATTACATTAA 14978 37 100.0 42 ..................................... AGTCCTAATTCACTTCTATATTTTTTCAATTTTACTGAAAAC 15057 37 100.0 36 ..................................... TAATTAACTTAGCTTGCATTCTATAATTCATTTATT 15130 37 100.0 38 ..................................... TTTATCATAGTTAATGATGCGGTTACTGTATTTCCTAC 15205 37 100.0 36 ..................................... TTTGGAAAGTATATAACCTTACAATAATAAAATTAT 15278 37 100.0 36 ..................................... AGGTATAGAGCAAGAGTCAGAAGGTGACGTGAAATA 15351 37 100.0 34 ..................................... ATTGAATTTAACGAAGAAACAAATAGACATGTTG 15422 37 100.0 36 ..................................... TAGATTGACTGATTAACATTGAAATATAAGCACTTG 15495 37 100.0 36 ..................................... CTATCTGTAATAACAGTATCAAATACTTTCGATAAA 15568 37 100.0 35 ..................................... GATAATACTGGAATTGCAAAAGTTTATACAGTTAG 15640 37 100.0 36 ..................................... CCAAAAATTAACGATCATAAACAGCCTTTTTATTTT 15713 37 100.0 35 ..................................... AGGTTGTTTACTTATGAAGAAGTTAATTTACAGAA 15785 37 100.0 36 ..................................... TTCTGCAGAAGAAGATCCTAGAAAGAAATGAGTTAC 15858 37 100.0 36 ..................................... TATATTGTTCATTAATTATAAAATAGGAAGAGGTAT 15931 37 100.0 35 ..................................... CTATATACTTCTGTTTTCTCAGCGATTGCTTTAGT 16003 37 100.0 37 ..................................... TAGTGTAGCTGGACCATCATCGGCTTATGAGTATTTT 16077 37 97.3 36 .............A....................... CAATTAGCTGAAAGAGTAGAGCAAGCAAATAGTTCA 16150 37 100.0 37 ..................................... TTTCTAAGTGTATGATTACAAATATGATCTTTAATCC 16224 37 100.0 36 ..................................... GGTCAAATTGCCATTGCCAAGAAAATATTTAATGAA 16297 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 61 37 100.0 36 ATTACTTAAGACATTAAGCTCCAATGGAGATTGAAAC # Left flank : GCATTGATGGAAGAAATTGAATATGTACCTTTTTTAATTAGATAACAGCAAAGGAGTATGTTATGATATATTTAGTTAGTTATGATATAGTTAATGATAGAAAGAGGACTAGACTTCATAAAATGCTGAAAAATTTTGGTGCTAGAAACCAATTCAGTGTTTTTGAATGTGATTTAGATGGTAAAAAATATGTTGAGCTTGAATATAAAATAAGAAAGATTAAAATTGAGAAGGGTGACAGCATTATGGTATATCCTATATGTTCATCTTGTGAATCTAAAATTATAAGAAGAGGTATATTTGTTCCACTTGATGTTACAAATATGATTTATTAAAGCGCAGGCCTATGTGTAATTAAAACACCGGTACCCTGGCGATGCTTTAGAATAGGCACTTGAGAAGCAATTACTATAATATCTTGTGCAAATATTTAATGGAAAATGATACTTGGCGAATAAGGTGCCTATAAACCAGTGGTTTCAAGGGGTAAAACGCGAGCG # Right flank : CAATGAAATCATTTTTGGTTGTCTTTCATACCTTATTACTCTGAGTCAATATTATTTTTGGTTACAATATAGGTCTGGGGATTTTTCAAATGGCATTACTTGTTTTATAATATGAACTTAGAGATAAATAACAAAAAATCTAATAGCTACACTGAATTTTATAGCATACTAAACTATATTTATGAAAATTTAATGAAAGCGATTAATATAGTTTTATCAAAACCTCATCATGAGCTGATAAAAGATAGCAGAGTATGTAAATACCAAAGCTTAAAAAATACAAGTATGGATACTATAAAGTGGCTTGAGAAAAGACCTCATTTATTAGAGAATATAGATGGTAGAAACATTCCAACTCAGGCTTTACAGGTAACTAAAAAGGTAACACTCGACACTAAGGAAAATAGATTTCTAAAGTTTATGTTAATAACTATAATTCACAAGATAGATAGTTTTATAAGAACTTATACATCAACATCTTGGAAAAAGAATGAGGATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACTTAAGACATTAAGCTCCAATGGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //