Array 1 1175196-1173539 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABKAZ010000012.1 Vibrio parahaemolyticus strain CGVP10 DeNovo_Contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1175195 28 100.0 32 ............................ GTCATCAAAATTTATCGATAAATTAAAAGAGT 1175135 28 100.0 32 ............................ TTAGCCTTAGCTTTAGCCTCTTGCTTGGCCTT 1175075 28 100.0 33 ............................ GATGAGGAAATGGCTGAGTTAGCTCGAAACCTT 1175014 28 100.0 32 ............................ GTCACAAGGGTGATTTCCACTCCTTGCTGATC 1174954 28 100.0 33 ............................ ATCCGTCTAACGCTTCATCAAATGGGTGGTATT 1174893 28 100.0 32 ............................ TTTTTTATTGGATTGAAGTTATGACATACCCA 1174833 28 100.0 32 ............................ TCGTTGCGTGTGCCTGGTGTTTATAAGGTGCA 1174773 28 100.0 32 ............................ GTCAAAACGCGATTGTGATGCAAAACCTCGAC 1174713 28 100.0 33 ............................ TATGACAGCTCAATGAGTCTAGCTAAGAAGTTT 1174652 28 100.0 32 ............................ CGTCAAGGCTGGTACTCAAACAGAAGCGAAAG 1174592 28 100.0 33 ............................ ATACCGCAATATTCACATAAACGAAAGAAATCT 1174531 28 100.0 32 ............................ TGGCAGCCTGATAAGAATTGGGCTTCTGGTGT 1174471 28 100.0 33 ............................ CAAAGAAAACCGAACTAAAGCTAGCTGCTTCGC 1174410 28 100.0 32 ............................ TCGGCGTTGACGCCTGCATTGCAGAAGTTGTT 1174350 28 100.0 32 ............................ AACTAGCGCGCTACGCTTACTCAAATCAAAAA 1174290 28 100.0 33 ............................ TGAGTTTCTGTTAATGAGCAAGAAACCTCCCTT 1174229 28 100.0 33 ............................ AATAGATCGTCGCCGCTGAATTGTGCTAGGTCT 1174168 28 100.0 32 ............................ AATAAACCCTGCCAGTGAGTCTGAGAGAGGCT 1174108 28 100.0 32 ............................ TTTGCCTTGTGGCAAGTGCATTGGTTGTAAAA 1174048 28 100.0 32 ............................ TTTGCGCTTCTTCTATGTACCAACTAGGTTTT 1173988 28 100.0 32 ............................ TTAGACAGATTGTAAACCTTGTAGAAGTCATC 1173928 28 100.0 32 ............................ TGCTGCCAACAGACTGGCTCGTCGTAACCTTG 1173868 28 100.0 32 ............................ TACGTAATATATATTGAAAAATGCGGTAAAGC 1173808 28 100.0 32 ............................ ATTAACTCACAGCTGCAACACCAATATTTTGA 1173748 28 100.0 34 ............................ ATCATCGATTAGCGTTGAGCGCTATGTTGATTCA 1173686 28 100.0 32 ............................ TGTCACAGCCACGAGCGCGTCCCTGGTTAACT 1173626 28 96.4 32 .............C.............. TGCCCGTTGTTGTAGCGTTGACCATGCATCTA 1173566 28 89.3 0 ..........A..C............G. | ========== ====== ====== ====== ============================ ================================== ================== 28 28 99.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTCAAATCCCCTGAGCGAATTGAACGCGATATGCAGAAAAAAGCGGAGCTTTGGGCGGCTAAATCTGGCAGGTCATTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTCCATTACCGTTTATCTATTTACATAGTCAACAAACCAAACAACGTTCACCGGATAAGAGCAGCAAATTTCCGTTGTTTATTGAAATGAAAGCTATCGGAGTAAAACAAGAAGGTTATTTCGACTGCTATGGGCTGAATTCCAAACTTAATCGGCAAGATTGCTTAGGGACTGTTCCGCAATTTTAATCAATAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAGGTATAAAATACAGCTAGTTACAATAGATAGATTTTGACAAGGTAAAAACATGATTTTTATCCTATCTATCTGTTGTAACTTTCTTTTATTGATTTATTCTGTT # Right flank : GGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTAAAATTTAGATTTTATTCTCATAATATTTAGCCAAATAATTTCCTACATTAAGTTTAATAATAACCTTACTTAAAGGTATTTTTTATTTTCCATGTAGGGTAATAAATTTTTTGAAGTGTTACGAAAACCCATGATTATTCATATTTAATTTGCCAAAATTTAACAAAAAACAAAAGTCAAAAGATATGATTGCTTGGAAATAATCGGTGAATAATGCATAAATTAATATTATGTGTATTATTATTGAAATTAATGATTGAAGTGTATCGTCTCGCGATAAGGAATAAAATAGTGTTGTGTAATGTTTGTAAATTGAATTATGACAAAACTATAAGGCTAGGTAGGATAGCCATTTGTGATGAATGTTTGATTTCTGCAAGTGATTTTTATAAAGAGCATAGTCATGAAAAGTTTGAAATTATATTTCATGCAGATATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //