Array 1 100172-100758 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000010.1 Cyanobacterium aponinum IPPAS B-1201 NODE_10_length_107264_cov_131.679457, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 100172 37 100.0 44 ..................................... TTTGTTACGAATACCGTAGGGTAGCTAGCTCTTACTTGGTCTTC 100253 37 100.0 40 ..................................... GTAGCTTTGGTGAGAGTTAATCAAGATGACGTCATCTTCA 100330 37 100.0 45 ..................................... AATTTGGGCTAGAACTTCCCCCCATACAGAGGTAGGGATATAATC 100412 37 100.0 40 ..................................... TGAGGGAAGACCTTCTATAAAACGAGGCTGACCTTCTGCA 100489 37 100.0 42 ..................................... TGGGAACGCAGAACCTCTTATAGAGTTTGAATTACTATAACT 100568 37 100.0 39 ..................................... TCCCAAGGCTTTACCCAAAGCTCGCTGATCAACCTGTGC 100644 37 100.0 41 ..................................... TCGCTCATTCTTGCGATAATTCATCACAGACTTATCATCAA 100722 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 8 37 100.0 42 GTTCGATTCCACATTTACCCCGTAAGGGGACGGAAAC # Left flank : TAACCTAAGCAAAAGGGTAAAGGCTTTGTTTAGGAATAAATTGCGATCGCACTTAATGTAATAAATGATTTTCTGTAATGTTGTGACTAAATTGATTATCTTCGGCAAAAGCTACTAACCATTCTTTTAAATTGCTATATCGCAACTTATCTTTTACTTGTTGTCTTACCGCAATGGCTTGTTCCTGTCCAATAATAATTGACTATATCCTGAAAGAATAAAATTAGTAGTTTATGTGTTGTAAAGAAAAGTAACAAGGGGTTGTAAAAATGTCGCAGTTAGTAAATAATAGTTAGAGTTAGATTTTAAGGTTAATAAGTAAATAACTGAGTGTTAATGCTTAACTTCACTTTTTAATTGTGCTTATTGCCGAATAAACGTCTAAAACAAGTTTTTTTACCTTGATAATTTAATATCATTAAGAAATGTAAAGAACTACTTTGTAGTTTTTCGCAGACAGTTTGTCAAAGCTATGTCTGACAAGGTTTCTAACGACTAGA # Right flank : CGGCTCAGAAAAAAAAGCCCTACAATAGATACAGAATTAGAGATGATAAGATGAGCAGATATAGCAAAGATTGGAATAAGATTGCGTGTGCCATCAAACAAAAAGCCGATTGGAAGTGTAGTCAATGTGGTGCTGACTTCAAAAATAAATCAAGTAGAGGTAGTTGTCTGCAAGTCCATCACTGGAACCGAATACCAGAAGATAACAGACCAGAGAATTTAGTAGCCTTATGCAATATATGTCATTTAAAATATCATCGTGGCGGTAAAAGTAATATTCTTATCGGTCAATTATCCCTCAATCTATGACTTATCCCACTTGGTATCAAGAAGCGATCGCGCGAGGTATTGATTTTATTGTAATTGTTTACGAGAAAGCAGAAGGCTTCGTATTTTGTCCGAGCAACCTAGAAACAACTTTCCGTGTTGGCGGGGACTATGATGGTTCTTTTTATACTAATGGAGAAGGAGCATTAAGACATTATTATAATTGTCTAAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGATTCCACATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 1 75541-74543 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000022.1 Cyanobacterium aponinum IPPAS B-1201 NODE_22_length_83366_cov_126.103389, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 75540 37 100.0 45 ..................................... ATTTACTAATTTCGATAATGCTTCAATCTGTTTAAGAGTTTCACC 75458 37 100.0 45 ..................................... ATTGAAGGGGCAGAAACTAGAATACCTTACGAATTACCTGTTCTT 75376 37 100.0 46 ..................................... CATTAAGAGTGTTGTCAAATTGACCAAGGTTGCAATTGAGACGAAG 75293 37 100.0 43 ..................................... GCTTTACGATGAAATGCTCCCCACCCTAGCCCAGCTAAGGGCG 75213 37 100.0 43 ..................................... TATCGTCAAGAGTTGTTACTCACTTGAACGACTACTTGCTTAA 75133 37 100.0 46 ..................................... TAACTTTAGTAGTGGCGGTGGTTTTGGTCTATTCTCTGGAGGTAGG 75050 37 100.0 44 ..................................... GAAAAGAACCCTATTTAGCAGATGCTCTTAGACAACAAACAACA 74969 37 100.0 39 ..................................... TAAATCGATAAGCTGTTGCCACTCCAGCTTACCTTCATT 74893 37 100.0 46 ..................................... GACGCTGTGGCGGCTGTGACGCTGTGGCGGCTGTGGCGGCTGTGAC 74810 37 100.0 39 ..................................... AGCAGCTCTTTTTGCGGTTAGTTTTTCTTTGATTAACTT 74734 37 100.0 39 ..................................... TAACTTATTTTTAAGTTGTATAAAATCTATGCTTTTCAT 74658 37 100.0 42 ..................................... TTCCATTATCTAGTTTCATAACAGGGTTTTTACTACCTAATT 74579 37 86.5 0 ..............................TAAT..T | ========== ====== ====== ====== ===================================== ============================================== ================== 13 37 99.0 43 GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Left flank : TATTTATTAACTCACCTACATGAAGATAATATCGGTAAATATTATATCTATGGCGATAACATTCATCATTGGAGTGAAATTAGTCTTAAATTAATTTGCCAATTAACCACCGCAGAAAAAACTTTTGCTTTAACTTAGTTATTTTCAACATCTACAAAATAACCAAGAAGGAGAAAAACTTTTATCCGAATATCTTTATTAAGTTAAACTTCAATGGGAATATTCTGATTATCTAGCTTTGTAAAGAAATATTAACTTAACTTGTCAATCTGTCGCAGTTAGGAAATAATAGTTAGAAAGAGTTTTGGCAATAAAAAATTAGATAAGTTCCGTTTTTTGTTAGGATTCACTCTTATACTTACGGTATTATTCATTTTTACTCAAAAAAGCCCTTTTTTACCTTGATAAAGAAATAGTGTTAAGAAGTGTAACGCATAATTTTGTATTTTTTCGCATACACTTTGTATAAGCAAGATGCAGTAAAGATTTCCAAAGGTAGG # Right flank : TTTCGATCGCACGAACTCATTAAGTACCCCAAGAAAGGAATAGGGTACTGAAACTAAAGAAGAAAAAACGTTAGACAGAGCAAAAAAAACCTCAGCAATAACTGAGGAGACAATATTTATAATAACGGGTGTAGTAAGCTAGGAGTTCTTTATAAGTTACTAGATAATCTATCAGGAAAAGTTTGAAGTTCCCTAATGCTTTTCTCATAGCCTATGTCACCTTCATTGTATGTGATGTCGCCATGATTATTGTTCCCCTGATTATAGTAATGATATTACCAATAAGTCTCTAGCGGCGAAACTACCTGCAAAATGAACTCCTTGTAATGTGGGATTATTTTCTTTTTTTGCCATGACCTCAATGCTAAGTAAGTGATTATTATGTTGTTGATTTTAAGGTTCTTCAGAGTTTGGTTATGATAAATTAAGAGAAACAGGACTTCTATAACCTTTATTAAATAGTGTTTATAGTTAAATAAAAACTAAAAGTTAATAAGTTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 83204-82936 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000022.1 Cyanobacterium aponinum IPPAS B-1201 NODE_22_length_83366_cov_126.103389, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 83203 37 100.0 37 ..................................... TCTTCTCGTCTTTCCGCTAAGAGTTCTTTAGCCTCAG 83129 37 100.0 41 ..................................... TTTCGGAGGCTATTAGTTTATAGCTTAATTAATGAACGATA 83051 37 100.0 42 ..................................... ATAAGCAGGTGCTAATATTTCCTTTCCGTCACGTTCAATACC 82972 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 4 37 100.0 40 GTTAATTTCCTCATTTACCCCGTAAGGGGACGGAAAC # Left flank : AAAAAATGAACTTATCTAAATTTCTTTTGCTAAAACTCTTTTTAACTATTATTTACTAACTGCGACAGATTGACAAGTCAGCTTAACACTTATTTACAAGATGAGATAGTCAGGAGACTCGTAGGGAATGATTTAAGCGAAGACACTATCACTAAAGTTCAA # Right flank : GCTTTTGATAAGTTCTACCGATGTTGAAGATGTTAAATAAGATATAACTGAAATTTCAGATTAGTGTATTAATACTAAAAAAGAAAATTTTAAAATCGATTTTAATAAAGTTTTCATCAATTCTTATTACTGTTTTCTGTTCTCCACCTTCCGCAGTCCATTTTTGGCTAGATGAAAATCTGACCAAGTATAAAGAAGAGTCACTCATAAGCCGGATTCTGTTCCTTTAAATAAATTAAAGGGGTAGTTATCTATCTGGGATGAATATTACTAATCACCTCAAGCGGTACACCAAAAGCGGAATCGGGAAAAGACCAACCATAATTCCTTCGACCTTGCTCCCAACCGGGGTTTACCGAGCCAGTACCTCTCGATACTGCTGGTGGGCTCTTACCCTCACCTTTGCACCCTTACCTCTAATCGGAGGCGGTATTTTTCTGTGGCACTATCCTCACGCTCGCGCGCACTGGGCGTTACCCAGCAGGTTTGGTCTTTCGGGA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATTTCCTCATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 19998-20977 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000003.1 Cyanobacterium aponinum IPPAS B-1201 NODE_3_length_147458_cov_125.856371, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 19998 37 100.0 38 ..................................... GGGCTTTTTCATTGCCCAGTTGATATGATCGGAAAAAT 20073 37 100.0 36 ..................................... GCAATGTTTCTTCTTGTTTCACCCTTTCTACTAATG 20146 37 100.0 34 ..................................... TATAATTTGATGGATCAATCGAGCGGTACATTGT 20217 37 100.0 37 ..................................... GAATTAACCCCACTAGAGAGATTAGAAATGCAAAATC 20291 37 100.0 34 ..................................... TCAAAAGAGAAATTCCCATTGAAATCAAACCAGA 20362 37 100.0 36 ..................................... TCGTGTCAAGAGTATAACGGAATAAAGTTTTTCGTC 20435 37 100.0 35 ..................................... TGGTTCTATCGCTTCGCTTGTGAATCGCCCTAGCC 20507 37 100.0 35 ..................................... GTGCCTAGACAAACAAGTCGCGCGAATGCCCTTGG 20579 37 100.0 35 ..................................... AGACAATGTGAACGCTGTGACGCTGTGACGTGCTG 20651 37 100.0 37 ..................................... ACAGCGTCACAGCACGTCCAGCACGTCACAGCGTCAC 20725 37 100.0 36 ..................................... TTCTTGTTTATTGGGGGATTATCCCCCCATTGAAAA 20798 37 100.0 35 ..................................... CCCACAAAATTCCCTCCTTTTATTCGCAAAACCAA 20870 37 100.0 34 ..................................... AAATAATTATTTCATTCATTTTTATCGTGTGATA 20941 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 14 37 100.0 36 GTTTAAACTCTAATTAATACCTATAAGGGATTGAAAC # Left flank : GTATATAATTATTAGCTACGATATAAAAGACGATAAAAAAAGAACTAAAATTCACAAAATATTAAAATCCTATGGTGAATGGGTGCAATATAGTATTTTTGAGTGTGAACTAACCGAAACTCAGTACGCAAAATTACGTCATCGTCTCTCAAAATTAATAAAAGACGATTCTGATAGTATCCGTTTCTATTCTATGTGTAAATGTTGTCAAGGTAAAATAGAACGTATTGGGGGTGAAATGCCAAGGGATAATACTATTTTTGTTGTCTAAATAGCGTAAGGGGTAGGGTGTAAAAAACATAATCGGCTAAAAAATTCATAAAGTCTTTACCCCGTATAGTTTACGAATATTTTATTTTCTTATAGCCTTACGCTTCTTTATTTGCAAAGATTTCAGCGATAAAGGGTGGACATTAAAGATGAATTTATTTATAATTGAAGCTAGGCTTATGCGATCGCACCTTGAAAACCTTATATTTCAAAGACTTCGATTATGGGCG # Right flank : CGCATTTTCCATGAATGCGGCAGTCTCGAAAATTGCTAAGGAATATTTTTGTACTTACAAGGAATTGAAACGACACTAACGATAAATTTTCTTTATTCAAATCCTTGGATGTTTACTTAACACTGAGTGGTCATTTCACTCATAATTATCATCAACATATTTTTTGATTAAGGCAACCCCTTGTTTTTGAAATATTTTCTGGCTAATGTATTCATTTGCACCATAAATTTTTAATTTTAAATAGTTTTGAAAACAAAAATTATCAGCCACTATCACAATGGGTAAAGTTTGATATTCCATCAAGCTACGAACTACTTTGCAAAGTTTTTCTGCTTCTTCATTTCCTGTCTCTAATTGAAAAATTATCAAATCAACTTTTGTCTTAAAAATATAGTTTAAACCCTCACTTAAGTTATTCGCATTTAAACAAATATAATTTTCCCCTTCTAAAATAATTTCTACTTCTTGTAGCCAATTTTTATTTTCACTCAGACAAATTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTCTAATTAATACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 6656-6026 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000041.1 Cyanobacterium aponinum IPPAS B-1201 NODE_41_length_38177_cov_125.597188, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 6655 37 100.0 34 ..................................... TATCGGGTGCGATTTGCATCGGGGCATAAAGTTG 6584 37 100.0 34 ..................................... TTTTAGGATAAAGTTTTCTGAATGCAATTAAATC 6513 37 100.0 37 ..................................... TTAATAAGCCTGATTCCAATATAGGAAAATCCTTGGC 6439 37 100.0 38 ..................................... GTACGAGGAAATTAAGTGCCTCACTATTGATCATGACT 6364 37 100.0 37 ..................................... CGGAAGGTGTCATTCCTTCCTCAACAGTAAGGATTAA 6290 37 100.0 39 ..................................... AACTGTTCATGACTCATTTCCGCACTAAAAAATACCACA 6214 37 100.0 41 ..................................... ACGCAAGGTCGTTATTTGTCTGTAGTGCCGACAAATGATGA 6136 37 100.0 37 ..................................... ATGTTTAGCACTTCCAAATACAGCTAATTTGTGAATA 6062 37 89.2 0 .............................T..AT..T | ========== ====== ====== ====== ===================================== ========================================= ================== 9 37 98.8 37 GTTGAAATAAGACAATACCTTCTATAGGGATTGAAAG # Left flank : CATCACAGTTAGCATTGAGTACCCAGAAAAATAATCGCCAAAATAATCCCAAAAAGACAAATTCTTAAGTTACAATGAGGGAAATCGTGCCGCCGATCAAGTTGTTGTCAACCTCTGTTCTGCGAAAAATGAGGGGTAGTTTACCTAGTAATAGGTTTGCTTTCTGTCCCTGATAACTGCTCACTCTGATGCTGCGCACTGAATAAAGTGCGGAAACAAGGGGCACTCCCAGCAAAAGGAGTTTGGGTGTACCAATGTAGTGGTTATCCAATCACCTCCGATCAAGGAGGAATCCCAATTTAAGCGTTAGTTAAAATGTACGAGTTACACTAATTCGGATTTTATCCTTACGCAATCGCTGAAACTCCTATAAATTAAGAGATATAGCGTTTTAAGAAAATGCAGAATTCCAGTCAAAATCAGAATTTTCGTATTTTTAGAGGTGGCTTACGCAAACTGCTTTTACAAGCCTTATTTTATAAGGACTCTGACTAGGGGCA # Right flank : ATTAATAGTGCCGTAGATCAAGTTTTCATAACCTCTGTTCTATGAAAAATGAGGAGTAGTTTACTTCTTATAAGAAGTTTGCTTTCTGCTTCTGCTAACTACTTGCCCTGATGCTGTCTATCTTAAAGATAGAGAAACTAGGCGCACTCCCAGCAATAAGGGTGCAGGTGTACTGCTATAGCGGTTAGCGAATCACTTCCGAGCAAGGAAGAATTCTCTTTGAGAATTGAAAGCGAGTCCCTCCACGTCCTAGTCATTGAATTGGCGACATTAATTTGTGATCACGTCATTTAATTTGTTAAGACGACATTAATCTGTTACCGATGACAAATAATTTGTTACTGTACAGCTCTAATCTTTTAGAGTTAACTGTTATGACTTTGGAGCTATCTATAATTTATTTACGGGCGTGGAGGGACTCGAACCCCCGACCTGCTGATCCGTAGTCAGCCGCTCTAATCCACTAAGCTACACACCCAGCTAATTGACACTTATCTAGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATAAGACAATACCTTCTATAGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 1 35302-35501 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000044.1 Cyanobacterium aponinum IPPAS B-1201 NODE_44_length_35560_cov_125.597974, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 35302 37 100.0 47 ..................................... TAAGTCTTTAGACTTGTCACTATCACCGGTGATAATGACTTCCACGT 35386 37 100.0 42 ..................................... CATATAAAGCTCTACAGTCTCGTGGGAACTAGAGTCCATAGA 35465 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =============================================== ================== 3 37 100.0 45 GTTAATTTCCTCATTTACCCCGTAAGGGGACGGAAAC # Left flank : TACTCAATTGGCAAAATTATTAGAACAACAACATTGTGAGAGAGTGCAGTATTCAGTTTTTGAATGTCCTTTAGATGTAAAAAAATTAGAGCATCTTCTCTCTACTCGATGGTTAAAAGTTCTAAATTTACAGGAAGATAGCCTTAGAATTTATCCCCTAGATGCTTCCGCAAAACAAAAAATCAAAATTTATGGACTGAAGGATAATCCTCCCTACGAGTCTCCTGACTATCTCATCTTGTAAATAAGTGTTAAGCTGACTTGTCAATCTGTCGCAGTTAGTAAATAATAGTTAAAAAGAGTTTTAGCAAAAGAAATTTAGATAAGTTCATTTTTTTGTTAGGATTCATTTTTATACCCAGAGTATTTTCAGTTTTTGCTCGAAAAAACCTTTTTCTACCTTGACAAAAAAATAGTGTTAAGAAATGTTAAGCGTTATTCTGTAGTTTCTCGCATACATTTTGTACAAGCAAGATGTAGTAAAGTTTTCCAAAGGTAGG # Right flank : TTTCTAACTTGGGCGACTAATGCAACAGCGAGAATAATTGAGTTAATTTCCTCATTTAC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATTTCCTCATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 110931-111631 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000004.1 Cyanobacterium aponinum IPPAS B-1201 NODE_4_length_138326_cov_128.475199, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 110931 37 100.0 34 ..................................... TCGATTGTCAAAAGCTACCTTACTTATGAGAGTT 111002 37 100.0 35 ..................................... AATTATAAAGAAATTGCAGAGCTTTATCAACGACG 111074 37 100.0 41 ..................................... AACTAAATTTGTCTTGATTAGATATTTCTATTTCTCATCTT 111152 37 100.0 34 ..................................... ATGTTTGGATTGTTTAGCAGGTTTTCTAATTTCA 111223 37 100.0 34 ..................................... TTTGTTCAATCATGGTTCTAATCTTCTGAATCGT 111294 37 100.0 38 ..................................... TGGTTTTGGGATAGGTTCAACGGGCAAATCGCACTCAC 111369 37 100.0 37 ..................................... TTGGTGAATAATTGGTTTTCCACCCCGCCATCAGACA 111443 37 100.0 41 ..................................... TTCTGCCATTCTTTTATCGCTAGTGGTAAAAATGTTTTCTT 111521 37 100.0 37 ..................................... TTCTAATATTACCTTGTGTAGAAGAAGTGATAAACAC 111595 37 97.3 0 ......................T.............. | ========== ====== ====== ====== ===================================== ========================================= ================== 10 37 99.7 37 GTTTAAACTCTTATTAATACCTCTTAGGGATTGAAAC # Left flank : GTCAGAAACGCTAAACTGTAGATTAGATTCTATTTTACCCTTGGCTGTATAGGTAGCTGTAGGGGTTTTATAGGTAATGTCACAGGTATAACCCGGAAAATTCTCATCCCATGTATAGCGATTTTCGTAAGCATTGCGAAAAAGTTGTTCTGCTGTTAAAGTTTGAGTCATATCTTGATTGTCCTATCTTTTTATTTTCTGATTATAACTCTTTTATTTGAGGGAGTATAAAAATATAACTATATAGAAACATAGGCAATCAGCAATATAAGATATGCGTAAGGAATGGGGTGTAAAATTAGACTTGAGAAGATTTACCTCCAAACTCTATATATAGTCTAGTTTCTAGCAATTTCAATTTTTTATAACCTTACGCTCTTTTGTTCACAAGGGTTTTCGTTATTTTTTTTGGACGTTGGTATTGATTTCATTTATAATTATGGATAGGCTTACACAATTGTACCTTGAAAACTTTATATATCAAAGGCTTCGATCGTGGG # Right flank : CATTAATACTTGCTAGGGACTCAAATATATTTATTGTGGATTTAATCTTATGTCATCAAACTGCTGATTTTGATGCCCTTGGGGCGGCAGTGGGATTAACTAAATTACACCCGGGTGCAAAAATAGTTTTAACAGGAGGGGCTCATCCTTCCGTCCGTAAATTTTTAGCACTCCATCGAGATGAGTTAGCGTTGATGGAATTTCGCTCCGTTAATCCTGCTTTAATTCGTCATCTTTTCATAGTGGATACTCAAAGGCGCGATCGCATCGGTAAAGCAGTAGAATGGTTAGAATTAGATAATGTGAAATCTGTGACGATTTATGACCACCACGAGGAAAATGGACAGATTAGTGCGGATAATTTCCTTAAGTATATAGAAAAAGTCGGATCTTGTTCCACAATTATTTGTGAACTTTTGCAACAAAAATCTATTGGTTTAAATTCAGTAGAAGCCACAGCAATGGCATTAGGTATTCATGTGGATACGGGTTCATTGACT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTCTTATTAATACCTCTTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 351-158 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000051.1 Cyanobacterium aponinum IPPAS B-1201 NODE_51_length_22338_cov_121.422133, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 350 37 100.0 42 ..................................... GCCATGTAGTAGATTTCACGGCAGGCATCTTCACGCTCACCT 271 37 100.0 40 ..................................... TTTGACGACTTAGAATCTCGTAGTGACGAAGCCATCGAGG 194 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 3 37 100.0 42 GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Left flank : AGTGTAACCTTCTATCATCGGTGTTAAATAATAATTTATTACATCCTCAATTATTATTCAAAGATAACACAAAACATAATCCTTTTGTATAAAACTTATTTATTTTCTCTATCAGGTAATAGACTGCGATCGCACTTAATATAATAAATGATTTTCTGTAATGTTGTGACTAAATGGTTTGTTCCTGTCCAATAATAATTGACTATATCTTGAAAGAATGAAATTAGTAGTTTATTAGTTGTAAAGAAAAATAACAGGGGGTTGTAAAAATGTCGCAGTTAGTAAATAATAAAGAAAGTTAGATTTTAAGGTTAATAAGTAAATAACTTAGCATTATTACTTGGGTTCACTCTATAATTGTACTTATTACCCAATAAACGTCTAAAACAGGTTTTTTTACCTTGATAATTTAATATCATTAAGAAATGTAAAGGACTACCTTGTAGTTTTTCGCAGACAGTTTGTAAAAGCTATATCTGACAAGGTTTCCAAAAGATAGG # Right flank : CGCCATTAAAAGTAAAGTTTATAGAGGAAACCACAGGAAGAATTGATTTACAACAACAAGGAAAAATAGGAAGGTTAGCTGTTTTACCATCTTTTAGAAATAAAGGTTATGGTCAAATTATTCTGCATAATTTAGAGTTAGTAGCAAGAGAGAATCAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 19829-19406 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000055.1 Cyanobacterium aponinum IPPAS B-1201 NODE_55_length_20057_cov_121.513899, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 19828 37 100.0 43 ..................................... TATTTCTTAAAGTACTTAAATGTAGAACCTTATGTTAAAGACC 19748 37 100.0 39 ..................................... TACAGGATTTGAAAATGTCGAGTATTTGATAGAAGAAAA 19672 37 100.0 38 ..................................... GAAGGCCGTTACTTGCTTTCTCTAATGCCAATAAAGCT 19597 37 100.0 37 ..................................... ATGGAAGAGTACAAAACCACTCAAGACAATAACAGCG 19523 37 100.0 44 ..................................... TCCACAATTTTCGAAAAAAAAGAATTTGCGATCGCATCTTTAGG 19442 36 75.7 0 ...A......T....G..T.A...G.....TA-.... | G [19408] ========== ====== ====== ====== ===================================== ============================================ ================== 6 37 96.0 40 GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Left flank : AGTCTATAATTTCTTGAGGTAAAACGGATTGATGATAAAATTGTGCATTATTTTCTGTTGTCATTTTTGCTTAAATCGAAAGGTTAAATATCATAAAAATTAAACATTTTATCGTAACTAATAATGGTCATTACTTAGATGCAACTTTAGGAGCAGGGGGGCATACAGAATTAATTCTAAAACAGGGAGAAAATATAAAAGTAACCGCTATTGATCAAGATATAAATG # Right flank : TGATTTTGAGAAAAAGTTAAGAGAGAATTAACAAATAAAACTACAATGATGGTGATAGATATTTAAGTTGACGCAATTTAGTTGTAATCAGTGACACAAACTCAAAAGTATATTCACAAAACGATATTAAGTAATGGTATTACCCTAGTGGTAACGGAAAACCCCACCACGGATATTATTGCAGGGAAAATTTTTTGTCGTCAGGCGGGTAGTTTATGGGAAGCAAAACATCAGGCTGGATTGTTTCATCTTTTAGCTAGTGTCATGGCTAAGGGCACTCGGAATTTATCTTCTTTGGAAATTGCGGAGAAGGTAGAGTCTATTGGAGCGGCACTAGGCACGGATACTTCTAGTGATTATTTTTTGGTCAGTATGAAGACTATTACAGAGGATTTTCCTGAAATTATGGCTTTAGCCTCCGAAATTCTCCGTTTTCCCTCTTTTCCTCTGGATGAGATTGCACTAGAAAAGAATATTACAATACAAAATATTTTGTCTCA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 35726-35983 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000005.1 Cyanobacterium aponinum IPPAS B-1201 NODE_5_length_135812_cov_124.723897, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 35726 37 100.0 37 ..................................... TCCATTTATGGAAAAATTAAGCATTAGAACCTCCAAA 35800 37 100.0 38 ..................................... TCATTCGCTCGTTGTACTCGGCTTCTTCTACTACTTTC 35875 37 100.0 35 ..................................... TTGACGCACAAGAGGCGGTGGAGAAAGGTGATTCA 35947 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 100.0 37 GTTTCAATCAATGTTTCCCTCTGGGGTTGATTGAAAG # Left flank : CAAGAGAAAGCCAAACATTTAGCTTTATCTTCCAAAGACTAAATTGAATTATCGAACCTTGACAACTAAATAGATAATTAATAAATAATAGCACCGCAGTTCATGTTTTAACCTCTGTGCTGTGTTAAATTTGGGTTAGTTTGTCTGTATCATAACAGATGTGCTTTCTGACCCTGGTGACTGTCCACCCTGATGCTGCTTACCTTGCGTAAGGAATAAGGTGTGCTCCCAGCAAAAAGGGGATAGACGTACTATAGTGATGGCACTGAACCACCTCCGAGCAAGGAGGAATCTATCCTTGAGACTGTATTATTTTTCGGTCTTGATGGGAAATTTAAAGTTGACCCTTACGCGATCGATGTACCCTATGTATATCAAGTCTTTTGGGATTTTCTTTTCAGTTCATAATTAGAGTGTGTTGTCTGAAATGGAGTTTTACCCTAAGCCTTCCGCAAATAGGCATCCAATTCCTTTTGTTATAAGGCTTCTGAACCGCAGGG # Right flank : GTGTTATTTTCGATCGCATTTCTCTTTTGATCTACTTGGCAAGACAAAAGAAGATTAAAGCAATACAGTATAATTAACTTAGGATAGATTGAAAGGCGCACTTCGTTCGGGAAAATCTCGGATATTGCAATGAAAAATGTTTACAAAAGAATGATGATTCTCTACTGTATAACGACATTAATTTGTCACTGGCTATTCAACGACAAGAATTTGTCATCACGACACTTAATTTGGCACAATGACAGTAATTTGTCACCGATGACAATTAATTTGGCACTGTACAACAATAATCGGGATGACAGGATTTGAACCTGCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAAGCTGCGCTACATCCCGCTATCGTTTAATAATCATAACATATCTTGAATATCAAATCATTTTTTATCTTAGAATTCATCGGGTTTAATTAAATTTCTCATTTTCACAATACCCTTTTTTATTCTTCTGGATACGGTTATCACGCTCACTCCTA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAATCAATGTTTCCCTCTGGGGTTGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.53%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 132706-132977 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEBC01000006.1 Cyanobacterium aponinum IPPAS B-1201 NODE_6_length_133412_cov_126.587343, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 132706 37 100.0 43 ..................................... TGGTGGAAGACATTTTGGCAATCGTTCACGTCTTCTCTTGCCG 132786 37 100.0 41 ..................................... GCTTTACGCTCTTGAGCTTGACGCTGTTTCTCAGCTTGAGC 132864 37 100.0 40 ..................................... TTGACCCCAAGCTAAGTACTGCACTCCATCAAGAAAAGCT 132941 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 4 37 100.0 42 GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Left flank : TATTGAGGCTACGATCGATGTTAAAGCTACGGAAGTGAAAACCAAATGGATTAAACCAGAAAAAAAGGGCAAAGGCTTTGCTTAACCTTCTTTATCAGTACATAGATTGCGATCGCGCAGCGCCACCGAGGGTGATCACATCTAGTGTAAGAAATGATTTTCTGTAATGTTGTGACTAAATTTCCTGTCCAATAATAATTGACTATATCTTGAAAGAATGAAATTAGTAGTTTATTAGTTGTAAAGAAAAATAACAGGGGGTTGTAAAAATGTCGCAGTTAGTAAATAATAAAGACAGTTAGATTTTAAGGTTAATAAGTAAATAACTTAGCATTATTGCTTGGGTTCACTCTATAACCGTACTTATTACCCAATAAACGTCTAAAACAGGTTTTTTTACTTTGATAATTTAATATCATTAAGAAATGTAAAGGACTACCTTGTAGTTTTTCGCAGACAGTTTGTAAAAACCATGTCTGACAAGGTTTCCAAAAGATAGG # Right flank : GACTCATGTAAAAAAACCCTAAAATAGACACAGAGTTAGAAATGATAAGATGAGTAGATATAGCAAAGATTGGAGAGAAATAACTACAGCAATAAAGGAAAAAGCCCATTAGAAGCGTAGTCAATGCGGTGCAGACTTCAAAAATAAATCAAGTAGTGGTAGCTCTCTGCAAGTGCATCACTGGAACAGAATACCAGAAGATAAAAGACCAGAAAATTTAGTAGCTCTTTGTAATACTTGTTATTTAAAATATCATCATGGCGGTAAAAGTAATATTCTTAATCGGTCAATTATCTCTTAATCTCTAACTGTAGTTTAGACTAAATGTAGAGAAAAATGAGGAAGGACAAGACAAAAAAGAAAAATAGAGAGAAAATAAAATAATCACAAATTAAAATCTCTCTACATGAACAAATATAACAGACTAAAAAATTT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //