Array 1 620-123 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUH01000055.1 Ligilactobacillus salivarius strain FXJKS25M8 Scaffold55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 619 36 100.0 30 .................................... TTTGATGGACGCAATGAAGAACAAAACTAA 553 36 100.0 30 .................................... GGCACTTCACTGACTTTAAGGTCGGTTTGC 487 36 100.0 30 .................................... TTAGCGTCAGTTACTTCACTGAACTCAACT 421 36 100.0 30 .................................... TGTAGATGGAGTTAGACAAACGATAGATAA 355 36 100.0 29 .................................... TTAATCACCCACTTTGTGCTTGGCCTGAG 290 36 100.0 30 .................................... TAAAGACGCTGGATACACACCAATGGTTTA 224 36 100.0 30 .................................... ACAACTGGAGTTTGAGTACGTTTAGCTTGT 158 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 97.6 30 GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Left flank : CAGAAGTATGTTAAATCAATTAGGTTAAGACCCAACATTTGAAAATGCTGTATAGTCATAA # Right flank : CTAAAATACAAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGAGTAAACACACTATAGTGTGACATTACAGATAA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //