Array 1 65077-64001 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CNER01000020.1 Mycobacterium tuberculosis strain Bir 153, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                    	Spacer_Sequence                            	Insertion/Deletion
==========	======	======	======	===================================	===========================================	==================
     65076	    35	 100.0	    36	...................................	CGCCCCGTGGATGGCGGATGCGTTGTGCGCGCAAGT       	
     65005	    35	 100.0	    41	...................................	CCCGACGATGGCCAGTAAATCGGCGTGGGTAACCGATCCGG  	
     64929	    35	 100.0	    38	...................................	CACGGCAACAATCGCGCCGGCCCGCGCGGATGACTCCG     	
     64856	    35	  91.4	    39	.............................AC.G..	ACACCAATGCGTCGTCATTTCCGGCTTCAATTTCAGCCT    	
     64782	    35	  91.4	    40	.............................AC.G..	ACAAGTACGCCATCTGTATGTGCTGACAGCGGATTCGCAT   	
     64707	    35	 100.0	    40	...................................	CAACACCTCAGTAGCACGTCATACGCCGACCAATCATCAG   	
     64632	    35	  91.4	    39	.............................AC.G..	ACGCGTGAAACCGCCCCATGGACGAGCGCGACTATCGGG    	
     64558	    35	  97.1	    38	......G............................	CTGGACGCAGAATCGCACCGGGTGCGGGAGGTGCAGCA     	
     64485	    35	  91.4	    43	.............................AC.G..	ACAATAGAGGGTCGCCGGCTCTGGATCACGCTCCCCTAGTCGT	
     64407	    35	 100.0	    39	...................................	CATAAAACCGTGTTGCACTGCAACCCGGAATTCTTGCAC    	
     64333	    35	  91.4	    42	.............................AC.G..	ACGCATATCGCCCGCCACACCACAGCCACGCTACTGCTCCAT 	
     64256	    35	  97.1	    36	...C...............................	CGCCCCGTGGATGGCGGATGCGTTGTGCGCGCAAGT       	
     64185	    35	 100.0	    41	...................................	CACACCGCCGATGACAGCTATGTCCGAGTGACATCCTCCCA  	
     64109	    35	  97.1	    39	..................A................	CTTGAACCGCCCTTCGCGCGGTGTTTCGGCCGTGCCCGA    	
     64035	    35	 100.0	     0	...................................	|                                          	
==========	======	======	======	===================================	===========================================	==================
        15	    35	  96.6	    39	GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAA	                                           	       

# Left flank :   |
# Right flank :  CAACGACGACTGGGTCGCCACCGCGTCTGTTGACCGGCATTCAGGATGAGCATGATGGCGGCGTTGACGGTGAGGACGTTTGGTCATGAAATGACCCCGCCGGGAGATGTCCGGCGGGGTCGGTGGTGTTCGGGGTGTCGGTGTGGTGTTCAGTCTGCCGTGACTTCGGCGATGGCGGTGCGGGTGGTGGATTCGTCGACGATGGCCTTGTCGGCGGCGAAGGCGGCGACGAGGGCTTGCAGGGCGAGGTTGTTGACCGCGCGGGGGTAGCCCCGGCTGGTCTGGTGGATCAACCCGATGGCGTCGTCGGAGAACAGGGCATCGTCGCGTCCGGCTAGCTTGAGGTGGTGGCGTAGGTAGCTGCCGGTGTTGGTGTCGGTCATGGGCGGCATGGCATATCGGAGTCCGATGCGCTGGTCAAGCGCGGCGAGCACGCCGAGTTTCATCCGCCGCCGCAGGGTGGGTTGGCCGATGAGCAGGCAGGCGAACGGGCTTGACGA

# Questionable array : NO	 Score: 5.85
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.76,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAA
# Alternate repeat :   GTCGTCAGACCCAAAACCCCGAGAGGGGAACGGAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,12] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.40,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [38.3-0.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,1.15   Confidence: MEDIUM] 

# Array family : NA
//