Array 1 5701251-5701480 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM000736.1 Bacillus cereus F65185 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 5701251 32 100.0 34 ................................ GAAAAAGGTAATCTTATAAAACTTGCAAGAGCAA 5701317 32 100.0 34 ................................ GAAAAAGGTAATCTTATAAAACTTGCAAGAGCAA 5701383 32 100.0 34 ................................ TATAGGCTATAGCAAATACATCGGTGGAGGTTTT 5701449 32 93.8 0 ....T................A.......... | ========== ====== ====== ====== ================================ ================================== ================== 4 32 98.5 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : TAATTGGCCAAATAAACAAAACATACACCGAACACAACAAGGAACAGGTCCTTATTGATATAAAGGCCTTGATTATTCTCCATAAGTATTACTCATTTGGCGAAAAGTTTCGAAAACATGTCAAAATTATGGTCAACGAGTACAAAATTCAGTGTTTGAATGTGTTGTGGACGCAGCTCAATTTGCTACTTTAAAAATGGAATTAATTAAAATTATTGATGAGGATGAGGATAGTCTCAGATTTTATCAGTTAGGTAATAACTATAAAAATAAGGTTGAACATATAGGTATAAAGGAATCCGTTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAATGTATAGCACACATGAAATTCCTCGTACATTCGCACCTGAATTTTCATAATTTATGAGTGAATTTTAATGTTTTTCATACAGATTCTCTTATTAAATAAAGAAATATGTATATTTTTGAACAGAATTAATGTATTTTTGTATGATTTTAAACAAAAATCGCT # Right flank : TTGATAATGATAAAACTGTTGTTATTAAGTGTGAGGTCGCACCTTATATAGGTGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAATTGAGAGGAAAAAAGTAGAGGTAATTTGTGTGAAAATCTAAGTTTCAAGATAGAATTAAAATTTCAATGATTATAACAAAAAAGAACCATTGATAGGCTCTTTTTCATAGCTGGTAAATATGTTATCAACAATAGATGGCGATTAAGGTAGTAATTTAGATGCCTTTAAGTTAATCATCTGAATTTTGTAGGAAGAATTCTTTTTCCATACCTTAATGCTCAATGAAAAAGATATTTCATTTATTTGGGTGTTCTAGTGTATTTGGATCTTGCGCATTAACAAATTTTGTTTAGGGACAAAATGTATTTTCTTAATAATCAGAAAAATAACGCAGCAA # Questionable array : NO Score: 8.59 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 5844926-5844629 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM000736.1 Bacillus cereus F65185 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 5844925 32 81.2 34 ......T..CT.GC....T............. AACCAATCGAATATAAACGTGGGAAACCGAAAAT 5844859 32 100.0 34 ................................ GTGACGGATATAGAGACAGGTGAAAAAACAAAAA 5844793 32 96.9 33 ...................T............ CTTAAAGAATACTATGAAATTGAAAGAAGTACA GT [5844775] 5844726 32 100.0 34 ................................ AGTAATGATGTGGAGCAAGAAGGAATCAGTTTAT 5844660 32 65.6 0 .....................ANNNNNNNNNN | ========== ====== ====== ====== ================================ ================================== ================== 5 32 88.7 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : TGATCCGATTGATATTACTAGTATGCAGATTACGAAAAGTGTAAATTCTGAGCCTGGGAAAGATAAAGGTTCAGATACGATGGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATTAATACGCAATTAGCAGAAAAGACAGGTTTTACTAACGAAGATGCGGAGAAGATTAAAAATGCACTGGTTACATTGTTTGAAAATGATGCGTCGGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGGGATCATAATTCAAAACTTGGTCAATACTCTTCTGCAAAAGTACATCGTTTATTAGAGGTTAAACGGAATATTGACGAACCAAAAACAATCGATGATTACACTGTATTAGTACATGAATTAGATGATTTAAAAGTTGAGGTTATTAATGGAATGTAATAAAAAGCGTCAGAATAGTTGAACGAAAGTATCCTTATAAAGATATACTCTATCAATTTATTAAAGGAAA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTATGTGTTGGGCGAGTCAGGACTTCGTTCGTATTTTAGAAAATGTAAAAGCTCGTGGTATCTTGCAATCTACTTTCTCCTATTTCTTCTTAGAACAAAATAAGATTGATAAGAAAAAGATCCAGGAGAACTTTAACTTAACTGCTGGGGAGCTTGATATTATTCTCAACAACCCTGGAAAAGGAGAAGGGATTTTCCGAGTAGGAGATAGTTCGGTTTGGATTCAAACTGATCCATCTGACAAAGAAATGATGTTCATTGAATCGAATGAAGCGGTACTACAAGAGCTTTTAAACAATATGAAGAAAGTACAAGGGTACGCAGGATAATAGTGTACTCTTAAAAAGGAAGGTGAAATTATGCTTGAGAAAATAGTAGAGTGGGTCGGAGGCTTAATTATTGCTATAG # Questionable array : NO Score: 8.42 # Score Detail : 1:0, 2:3, 3:3, 4:0.44, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.84%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 5851745-5851253 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM000736.1 Bacillus cereus F65185 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 5851744 32 100.0 34 ................................ TCCAATGTGATGTGAATAAATACTTGGTATGAAT 5851678 32 100.0 33 ................................ GCCATGACTGTTAATAGTACAAACATGAGCCAT 5851613 32 93.8 34 ...........A...........A........ TACCTCGGGTTTATATTTATCTGGAACGCTCATA 5851547 32 96.9 33 ...................T............ ATAATATCACACTTTTGACAAAATTCAGTCATG 5851482 32 93.8 34 A........C...................... TCTACTGAAAACTAAGTCATTATCTTCATAAGCT 5851416 31 87.5 34 .........C.-.A.....T............ CAATGAGGGTTGCTGTTTTTGTAGACGTATACTA 5851351 32 96.9 35 ...........A.................... CAGCAACGGAACAAGGAGCTGTGAACGGATTAAAA 5851284 32 93.8 0 ....................A..A........ | ========== ====== ====== ====== ================================ =================================== ================== 8 32 95.3 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : TATCTAGTTATATATTAAAAGTTGAACACAAATAAAGAGAAGAATAATTAAAGTATTTGTGAGTTAGCAAAATAAATGAATTTTTAGTATTCAATATTCTTAAGAATGTTATATCATAAAAAAAGATCGAACGATGATATAAAGAATAAACTTGATAGGTGGATAGAGAGACAATATATAGTGAATTTTATTGTAAATTACGAATCAATATATTAAGGGTATTATGAAACTATACATTTTGGTTATTCAATTAGGTAATAGCTATGAAAATAAGGTCAAACATATTGGTGTAAAAGAATGAATTGATTTAGAAAGCCCTTTAATTTTTTAGGTGCGAATGTATAGCAAACATGAAATTCCTAGTACATTCGCACCTAGAATTCTCATGCTTTATGATGGGGATTTATGATTTTTATGCAAATTACTTTATTAAATAAAAACATTTGTATATTTTTGGATAAAACTAACGTATTTTTGGTTGATTTCGAACACAAATCGGT # Right flank : TAGTAAGTGTGTTTAACATCACTGATTGAGGAGATGGAGTTTTTAGATAATACTTTAACTTCAAACAATCCTTAGTGTATTAGATGCTCAACTAGAAGTATCTATATCTGCAGTGTCTAATACAAAAGTAAAAAGTATAAAATGGAGGGAGATTAAATGACCTACATTGCTCATATACGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAGCATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCCGGTATGCTCCATGATATGGGTAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTACTTCTTCACCTAAAAGGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATCATATCTGAGATAGTGGGAAATGCCATTATTTCTCACCA # Questionable array : NO Score: 8.49 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //