Array 1 96080-97693 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUGF01000009.1 Clostridium sp. AF20-7 AF20-7.Scaf9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 96080 28 100.0 33 ............................ TGAGTTTAGACAGCGTTTTTTAATTACAGTTTG 96141 28 100.0 33 ............................ CTGTGATTTAGTAAAGTAATAGTAATTTACGCC 96202 28 100.0 33 ............................ CAAACTTAGCAGCCACAACGATTGAAAGTTTAC 96263 28 100.0 33 ............................ TAAACATTACCGTTAATATCAACAGTGAGTGTT 96324 28 100.0 33 ............................ TATTAGTTTTAAACTTAAATTTAAAGAAAGCAG 96385 28 100.0 33 ............................ CCGTTAAAGGAATATCGTCCAATCGTACACGTT 96446 28 100.0 33 ............................ TTGTTTACACAACTAATAGCGGTGTAGTTAGAA 96507 28 100.0 33 ............................ TGTATCACTGGCAATTTGCAGTTGGCACTCATA 96568 28 100.0 33 ............................ TGTCCCGGTGAGGTCGTCACTGTATGTAATGGC 96629 28 100.0 33 ............................ CTTTAATTATAACTTTGCCGTAGAGCATAGGAG 96690 28 100.0 33 ............................ TGTACTGTATCCGACATTGGCAGCACAATACCC 96751 28 100.0 33 ............................ CTGAATCCGGGTATGGTTGGATCGCACAGATTT 96812 28 100.0 33 ............................ CTAATACTGCAATGGTTATTGAAGAAATCAATA 96873 28 100.0 33 ............................ TTGAGGGCAGCCGCACAAAGCAAACAGACCGGA 96934 28 100.0 33 ............................ CATTTTGCATGTAAAAAAATAAACTCAGAGTAG 96995 28 100.0 33 ............................ TACACAGCACGCGGGATACGTTACTGGATGCCG 97056 28 100.0 33 ............................ TACACCGCCCTCTCCGAGGGTCAGATCGTAGTA 97117 28 100.0 33 ............................ TTAATGAAACGTTTTTATCTTCAATAAATTGAG 97178 28 100.0 33 ............................ CGGACGGCGGCTATTACTGGGAACGATAAAGGG 97239 28 100.0 33 ............................ CTGCTCCGGATACCTTGATTTTAAAAGGCAAAA 97300 28 96.4 33 .......................A.... CTACGACAGGACAGAGGAGACAACGGACACACG 97361 28 96.4 33 ........T................... TGTGGGAGACATAGATTTATACAAACAGGAGTT 97422 28 96.4 33 ......................C..... TTCCGAGATTCTTTAACGTCTGGATATCACGGC 97483 28 100.0 33 ............................ CCTATTACAAGGACGTCAAGGCGCCGACCATGA 97544 28 100.0 33 ............................ TACCGGTACAATCAGCGGAACCGGAAGTTTGCC 97605 28 100.0 33 ............................ CGAAAAACCGGAATGGTTGACGATGGATCAGAT 97666 28 85.7 0 ............T...........T.TT | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.1 33 GTATTCCCCGCGCAAGCGGGGGTGATCC # Left flank : TCATCAGATGAGATTATTGAGTTGGCGGCGATTAGAATCATTAACCACAAAATTGCAGACCAATTGGAGATTCTAGTGAAAGCAGAAAAAGGTGTTCCAAAAGTAATTACTGAACTTACGGGGATTACAGAGGAGATTCTTGAGGAAAAGGGGATGGTTCTTTCTTCAGCGATAGAGAAGTTTTGTGAATTTATTGGACAAAGTACAATAGTGGGTCATAACATCGCATTTGATCGCAGCTTTTTAAAGGAAGCTTGTCGAAAGACCAATCGTATGAATCTAAAAAATCCGGCAAAAGATACATTAGATCTTGCGAGAAGACGAATCGATGATATTGATGATTATAAGCTGCATGCACTAGCAGACTATTTCCAGATAAAAGTTGAGGAGGAACATAGGGCATTAAGTGATTGCATCACAACATTTCAGGTGTTTGAGAAACTAAATGAAATTTAGAGATGGAGATCGGGAAAAGGTTGTAAATAAGGGATTTTTTTAGT # Right flank : TTCCTAAAATCTAAAGTTTGGGAAGATAAGAACAACCTTATGATTTCAACATATGAAGCCATAAGGTTGTTTTTTCGTATAGAAAACTTCACTGCTGCATCTTGAAGGTCACCAGAATTTGTGGGAAATGATAGGTGGTTGTTTGCTCAGTTTTTTGAAATATAGATGATTTTATCACAGGTGTAAAGTTCTTCCCCCCTCTGTTTCGCGTTTCATATCCGATATATTTACAATTCCCATCCAACTGACTATAATAAAGAATGCCCGTTTGTCTGCAAAGGCGCGGAACCATATCCATCTGCATCAGGGCGATATGACAGAAAAATGAACTTAAAAGAATGGAAGAAAGAACAATGGATGTAATTGAAAAATTTGGAAATAGGGTGAGCAGCCAGGCGCTTAAGGATCCGGAAAAAGCGCGTCGGCTGCTTCTTGCGGGATACCGCCTGCAGGAAAAGAAGCTTCAGTTTTTGCCGGATCGGGGACTGCCGTCGTCGGGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGCAAGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGCAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //