Array 1 265246-266433 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFYS01000012.1 Escherichia coli strain KS-NP037 sequence12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 265246 29 100.0 32 ............................. CCGATAAAATGCAAAAAACGCGGCGTTTTTTG 265307 29 100.0 32 ............................. AGGCATCGCATGTCGCCATTCCGATCGGGGAC 265368 29 100.0 32 ............................. GGGGTATGAGGGCGCGATCGTGGTACAGGAGG 265429 29 100.0 32 ............................. GAGCAACAAAACAATGAATCCAACGGATTGCC 265490 29 100.0 32 ............................. AACAAGCTCGCCCGGCCCGTCCTCATCAAGGG 265551 29 100.0 32 ............................. CCACTGCACTGACTCTCGTGCGTACGCTGCGG 265612 29 100.0 32 ............................. GCTGGCAACTGAATGCCCGCCGTATTGCCTTT 265673 29 100.0 32 ............................. CAAAGGCCCGCCAATGCGGGCCGATTTATCCC 265734 29 100.0 32 ............................. CCGGACGAGAAATTCACGTTCCTGCATTTCAT 265795 29 100.0 32 ............................. CCCTCCAGTACTGTGATGCGATCTTTAAGTCC 265856 29 100.0 32 ............................. ACTGGTTCTGTAACCCAAATTTGGGATCATTC 265917 29 100.0 32 ............................. ACGAAACGCAGTACGGTTTTGTCAGTTAACAC 265978 29 100.0 32 ............................. AACTCTCACCGGAGCAGAAAAAAAGAAACCAG 266039 29 100.0 32 ............................. GCGGACGGCAAAACAATCGGGAGTCTGGACAA 266100 29 100.0 32 ............................. ACTATCGGCGCTGTTCAGTTGGGACAGAAACA 266161 29 100.0 32 ............................. CGTGCCTTCGACTTTGCGGATCACGTCGTCTT 266222 29 100.0 32 ............................. ACGGGGACGAATCACAGCAGCGTTATCGTGAT 266283 29 100.0 32 ............................. AAACCGGACGAGGGCGCGCTAAAACGTGATTA 266344 29 100.0 32 ............................. CCTCTCAATTTGTAACGTCTGCAATGTCAGGC 266405 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.8 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 292136-293445 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFYS01000012.1 Escherichia coli strain KS-NP037 sequence12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 292136 29 100.0 32 ............................. TGGTTTGAGCCGTTTAAAGTTGAACAGGCGAC 292197 29 100.0 32 ............................. GCTTTCAGTCGAGTGGCAGCTACGAGGAATCG 292258 29 100.0 32 ............................. GACACGGATAACAGCTACCTGCAAAATTTAAT 292319 29 100.0 32 ............................. TTCTCCAATCAGCAGTGCCCATCTGATATGCA 292380 29 100.0 32 ............................. TCAGGGGAATTGCGATATTCAGGCAGCGTAAC 292441 29 100.0 32 ............................. ATCGCTGGTCTGCGAAAACGCGCGCCCGAAGA 292502 29 100.0 32 ............................. ACGAGGTACAGTGGTGCAAAAACAAATTATAG 292563 29 100.0 32 ............................. ACGAGGTACAGTGGTGCAAAAACAAATTATAG 292624 29 100.0 32 ............................. GCCCAGAATCTCTTTTAGCGCAACGATATTCC 292685 29 100.0 32 ............................. GCTCCGGTTTTAAAATAAACCCGGCAAAAACG 292746 29 100.0 32 ............................. TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG 292807 29 100.0 32 ............................. GAATATCGGGTGCCAGCCTGGACGCTGGCCGA 292868 29 100.0 32 ............................. ACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA 292929 29 100.0 32 ............................. GCAAACAGCTAACCACCGCCGGGGCGGTTTCC 292990 29 100.0 32 ............................. CGATGATGTAATAATTAGAGCAGAATCCAGTT 293051 29 100.0 32 ............................. CAAAATTTAAAATCATTTAAGCTTGTAAAACC 293112 29 100.0 32 ............................. GGTACACGGATATTCTGTCTAAAAGTTAACTA 293173 29 100.0 32 ............................. ACTGATAACGCCGGAGCCTTCTTTTTCAGCAA 293234 29 100.0 32 ............................. AGGTTGACGTTGATTTTGTTCGTTATGTTGCC 293295 29 100.0 32 ............................. CCAAAGAAGAACAACGAGCCAACTGGTTTCAG 293356 29 100.0 32 ............................. GCAATTTGTTGTCCGCGATCCGGTACGCGCGT 293417 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //