Array 1 75613-80207 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDOH01000101.1 Capnocytophaga canis strain CcD95, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 75613 47 97.9 30 .............G................................. TTAGTTATGAATGATAAAAAGAATAATAAA 75690 47 97.9 30 .............G................................. CTGATGCCGAAGGTTCTCGTATTGCAGATA 75767 47 97.9 30 .............G................................. CCGACAAAAAAAGCCCTAAAACACACACTC 75844 47 97.9 30 .............G................................. GCCTGTACGTGCTGTAAATCAAAGTCTATC 75921 47 97.9 30 .............G................................. ATATAATATGTCAGAAATTCAAAAAATCAA 75998 47 97.9 30 .............G................................. AAAGAATATTCTCACACCTTGCAGGTGAGA 76075 47 97.9 30 .............G................................. CGTAAAGACATTTGCGAAGAATACGCAATA 76152 47 97.9 30 .............G................................. AAACTGACAACAATAGCAAGAGAAAAATTA 76229 47 97.9 30 .............G................................. AATTGACGGTTTCTATATTCATCTATTTGT 76306 47 97.9 30 .............G................................. TATAAGTTCTACAAGTCAAATGACAAAAAG 76383 47 97.9 30 .............G................................. GTGTTACTTTGTTTACCCCCTCTTGGGTGG 76460 47 97.9 30 .............G................................. GCAAAAAAACTTGACTTGTATTGCAGAAAG 76537 47 100.0 30 ............................................... TCACAAATATATACGCTCTAAAAATACTTT 76614 47 100.0 30 ............................................... AATAAAGAATACAAAGGAAGCACGATAAAC 76691 47 100.0 30 ............................................... AAAGAGCCATGTTAGTATATAATAAAGAGG 76768 47 100.0 30 ............................................... TTTAGTCAATTCGGGGGCAAATTCTGACTT 76845 47 100.0 30 ............................................... ACTCTCTATACAAGCACGAGACCAAAACAG 76922 47 100.0 30 ............................................... AACAAAAAAATAACATAGATAAAGAAAAAA 76999 47 100.0 30 ............................................... TGTAATTGAAAATGAAATAAAAAATCCTAC 77076 47 100.0 30 ............................................... ATTAAACCACAAATTATATGTAAAGAAAAA 77153 47 100.0 30 ............................................... GGTTGGCAAAGTCTGTATGTATATGATCAC 77230 47 100.0 30 ............................................... AAAACATTCTCATATACCTATATTTATAAA 77307 47 100.0 30 ............................................... ACACGTAATGTTTCTAACATAGGTTCGTTT 77384 47 100.0 30 ............................................... ATGGCAGATTTTTCATTTAAACAAGGAGAG 77461 47 100.0 30 ............................................... ACAATATTGATTTTTTCAGTTTTTTTATCC 77538 47 100.0 30 ............................................... TAGAACCATCATCTCCTTTTATATAAAACT 77615 47 100.0 30 ............................................... TCGTTGATGTAGGAGCGATATTCGTCGATG 77692 47 100.0 30 ............................................... TGTTCGTACTTCATTTGTTTTGGAGCCTCT 77769 47 100.0 30 ............................................... AAGATGTGTACCTCACACCACTGGCAGAGG 77846 47 100.0 30 ............................................... ACAAGTGGAAGTGGCTTGTCTCAATACCGT 77923 47 100.0 30 ............................................... GAGGCACTAACTCGGAAAGTAATCATCTAA 78000 47 100.0 30 ............................................... AAGTAACAAATAGCAATGAACAACGAGCAA 78077 47 100.0 30 ............................................... ACAACGATAACATCGCACTGAATAATTTAT 78154 47 100.0 30 ............................................... CTAAGAAGCTATCGGATTTGATTACTGCCA 78231 47 100.0 30 ............................................... TCAAAACAGGTTTTTTACCTAATGCCGTAA 78308 47 100.0 30 ............................................... ACGATAATGGTTCAGGGAAAGATTCATTTT 78385 47 97.9 30 ........................G...................... CCGACTTTTGCGGTTTGTACGCCTGTGCTA 78462 47 95.7 30 ........C...............G...................... AATGTTTTTAAGGTTCGGCAACTCTTCAAC 78539 47 95.7 30 ........C...............G...................... AGCGTTGGAACAGAGCCAAAGATTTTTTTG 78616 47 95.7 30 ........C...............G...................... TTATAGAAGTTGCTGAAACAAAAAGAATGA 78693 47 95.7 30 ........C...............G...................... TACATTTGTACTTGTCCGTCCGCTTTCATT 78770 47 95.7 30 ........C...............G...................... TCAGGACTTGACATTGAACAAGCGAAGAGA 78847 47 95.7 30 ........C...............G...................... CATGTAACTGATATAACTGCTCATTACGGT 78924 47 95.7 30 ........C...............G...................... GGATAGAAACTCCAGCCGTTCCTGTCGCTC 79001 47 95.7 30 ........C...............G...................... ATAGGAGTTAGTAACCAACAAATAACAAAT 79078 47 95.7 30 ........C...............G...................... TAAACGTAACTAATTTTAAAAATACATTCA 79155 47 95.7 30 ........C...............G...................... AGAGCAAATAGAGATACGACACAAGATAAG 79232 47 95.7 30 ........C...............G...................... ATGTCCCTTTTTAATAATTAACAATTAATA 79309 47 95.7 30 ........C...............G...................... TTACTTCCCGATGCTATCGCTACGTTTATT 79386 47 95.7 30 ........C...............G...................... CATTGAGCAGATGAGTAGACAATAAACACA 79463 47 95.7 30 ........C...............G...................... AGCCGAAGTTTCTTTAATAGTTCTTCCAAT 79540 47 95.7 30 ........C...............G...................... TCTAAACAAATCGGATTTTGTCTATCATTT 79617 47 95.7 30 ........C...............G...................... AATACCATTCCCGTAAATAATTCGGCTCGT 79694 47 95.7 30 ........C...............G...................... TTTTCATAATTAATAACTTCTACGAGTTCT 79771 47 95.7 30 ........C...............G...................... GGATATTAAAATGAACACAGAAAGAAAAAA 79848 47 93.6 30 ........C...............G.................G.... TTTGAGCGATTATGGATAGGTTCTCTGACA 79925 47 95.7 30 ........................G.................G.... GCCGAGCTAAATGCATTGTAAGCTGAATGC 80002 47 95.7 30 ........................G.................G.... TGCTCTTTATGCCATTTTGAAAGGTTTTTT 80079 47 95.7 30 ........................G.................G.... GATTTCTCGCATGTTATCCATGTTGATATT 80156 47 76.6 0 .......................AG.CG...T.....TC...GT.CG | T,TCCC [80190,80192] ========== ====== ====== ====== =============================================== ============================== ================== 60 47 97.5 30 GTTGTAACTAATCACAAAGTTACGAAAAATTGAAAGCAATTTACAAC # Left flank : ACAAATGCTATACGGGCGAAAAAAGACAAATTTCTTATCCTAAAATGTTATGAATTCCGAACGATTTAACGCTTATAGAATTATGTGGGTAATGGTTTTATACGATTTGCCAACCGAGACCAAAGCAATGCAAAAAGCAGCCAATCTCTTCCGAAAACGCTTGGAAGACGACGGATTTTCGTTGTTTCAATTTTCTATATATACGCGACACTGCCCCAGCCGGGAAAATGCCGAAGTACATATCAAACGCGTAAAATCGTGGCTCCCGAAACACGGGAAAGTCGCTATTATGTCGATTACCGATAAGCAGTTTGGTGAAATTGAACTCTTTTATTGCCAAGCCAAAGAAACTCCCCCGCCTACCTATCAACAACTCGAACTTTTCTAAAAATAGAATAAAAAAAATGGAGTTTATTCGCCAAATTTACCTCCATTTTTATTTGAATTTCGATTTCTAAAATAAAAATAATCCTCTGACAAACAGAGGATTATTTTTTGAG # Right flank : GACTTCAAATAATGAAGGTTTAAAGTATCCATTACAAAAGATTTCAAGCAGTAAATTATGTCCTCGTCCTTTTTCTGACGTAAGATGTCGAGAAAGATGATAAAAACCATCCTCTTGCTTTTCGTATTTGATTTTTTTAGCCAAAATCCTGAACGTGTTATGTATAGCCAATCTTGAAATTGGAAAGGTGCATAGCGACAATCCCAATCAGGAGGATAACCTTGAAGTAATGTTCTGTACTCTATGCTGGAAAGACGAAAGTCGATGCATTCTTCTGCTTCCCAATGCACACTATCGGGATTTGGGTATTGGACTCCGTAGATAATTATATTATCTTGCTTATTCATTTTATAAAGAGTTAAGATTTTTATTTTCAACGTGTTAACTTTCGTGTTTTGGAATTTAGAATTAAGGTTTTGTTCGTTTGCTATTGAACTTTAGAGAACTTGTTTGTGTAAATTTAGTTGAGCATCAAATGTTTTTATAGAAAGGAATTTACA # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGAAAAATTGAAAGCAATTTACAAC # Alternate repeat : GTTGTAACCAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //