Array 1 62077-59028 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLKQ01000031.1 Azospirillum brasilense strain HAMBI_3172 CKLFCLNC_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 62076 32 100.0 33 ................................ GCTGCGGTCCTTGTCCCAGCCGACCGCGTGCAA 62011 32 100.0 34 ................................ GACAGCATGCCAACGGCGTAGTCCCATTTCTCGG 61945 32 100.0 33 ................................ ACCACTCGGGCCGCTGACTTCGAGAAGGCCGCC 61880 32 100.0 33 ................................ CGCTTCATCGGTGACCCGCGGGGAGAGACCCCG 61815 32 100.0 34 ................................ AAGTCGTGGGTGATGGGGCGTCTCGACTGGCCGG 61749 32 100.0 34 ................................ GCGAACGGCAAGCTCTACCGCTTGGACCCGGACG 61683 32 100.0 33 ................................ AGCAGCGGACCGAAGACCTTGAGACGACGGAGG 61618 32 100.0 32 ................................ AGCGACCGGCCGGCGGTCGAACGCCTCATGCA 61554 32 100.0 34 ................................ GCCCACAACGACCGCGGGCATCCCTTCTACGTGA 61488 32 100.0 34 ................................ TGCTCCGGCGTCATGTCAGCCATGGGCGGCCTCC 61422 32 100.0 34 ................................ ATCCCGACCACTGAGGCCCCGCAGCAGGTCCACC 61356 32 100.0 33 ................................ TCCGGCAACGTGTCGGTCGCGAACGCCACCGCC 61291 32 100.0 35 ................................ GCCCCGCGCCGGCTGGCGAACTCCGAGCTGGTCGC 61224 32 100.0 32 ................................ GCCGTGATGGGCAACGGTGGGACAAGCCTGAC 61160 32 100.0 32 ................................ CCCGTGAAGCCATAGAGGCAATGGCCCGCAAG 61096 32 100.0 33 ................................ GCTGTAGCCGGGGAGTTCGTCGCATGACCGAAG 61031 32 100.0 34 ................................ AAAAGAGCTGCGGTGAAGTGGGGTATCGGTCGAT 60965 32 100.0 33 ................................ GTCGTGTTCCAGAAGCAAAGGATCTACGGACTT 60900 32 100.0 33 ................................ GCCACCATCGCGCGGGACACCAGATGGGACGAG 60835 32 100.0 34 ................................ CGCGTTTGACTTTGCCGGACACCCGCCGCGGGAT 60769 32 100.0 34 ................................ GAAGCCGCCCGCGTAGGCGTCGACTGCATCGACC 60703 32 100.0 32 ................................ GGGGCGGGCCTACCCTGCCCCGGTTAGACCAT 60639 32 100.0 35 ................................ ACTACGATGGGGCCATGCGCCTTATGCTGGTGGAC 60572 32 100.0 33 ................................ ATGTTAACGGTCGCAAAAATCACCTTGGCTACT 60507 32 100.0 33 ................................ CTCAACACCTTCATCAACTTTGCCCAGGCGGCG 60442 32 100.0 32 ................................ GCCAAGGTGCCGGCGGTGATCGCCGCCAAACT 60378 32 100.0 35 ................................ CGTTCCAGTACGACAGGTGCGCGCACCGGCCCGGC 60311 32 100.0 33 ................................ GCTCTGTTCTCCGCCCGCCGGCAGGAGGAAATC 60246 32 100.0 33 ................................ TGCCCAAGGGCACTGAGATCCTGTGCAGCTACG 60181 32 100.0 34 ................................ GATGCGGCGGCAGGCCAGATCAAAATACTTCCGA 60115 32 100.0 32 ................................ GCATCTCGGGCAGCGTCGCCCATGGTGATCTC 60051 32 100.0 34 ................................ TCGCCGCTCTCGTCCTGTGAGGTGATCCATGGGT 59985 32 100.0 36 ................................ CTTGGTTTTTGCGGGAGGCATTGTAGCTACAAATCC 59917 32 100.0 33 ................................ GTGCTGTCTGCCGAGCTGAGCGGCCAGCGGTTT 59852 32 100.0 34 ................................ CATGCGCGATCCGGCTGTGCCGCAATCGGACGGT 59786 32 100.0 33 ................................ GGCTTGCTCGGCCACACCGCGAACTCCGGCGCG 59721 32 100.0 33 ................................ GCGCAGGCCGTCGATCCGTTCATGCACGCGCTT 59656 32 100.0 33 ................................ AAAGCGCACCTGGTGGTCGAGCGCGACCCCACC 59591 32 100.0 33 ................................ GCTGAAACCGTGACCGTTAGCGCCATGGAGATT 59526 32 100.0 33 ................................ TCCGTCCTGGTGCTTGTCGTCGTGCTCGGGGCC 59461 32 100.0 36 ................................ CCGGTCTGCGTCGACGGCCTGTGCAGTCGCCGGCAC 59393 32 100.0 35 ................................ ATAGGAGCCGCCACCGGCGAAGGTCAGGAGCGCAC 59326 32 96.9 38 ....T........................... TCTTCCTGGGCGGCGACCGGTCCAACGGCGTCGTGGTC 59256 32 100.0 34 ................................ GCTCCTTTCTCGGTCGGGTCCGCATGCGACGCCG 59190 32 100.0 33 ................................ GTGGCGGGCGTGGAGCCGGTCGGTTGGCACAAG 59125 32 100.0 34 ................................ GTTGCGGCGCAGGCGAGCATCGCCACGATCTACC 59059 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 47 32 99.9 34 GTCGCCTCCTGCGCGGAGGCGTGGATTGAAAC # Left flank : TTCCTCTGGCGGTGACGCGGTGCTGGTCCTGGTCTGCTATGATGTCTCCACGGAAACCCCGGCCGGCCGTCGCCGCTTGCGCCGTGTGGCAAGGGCTTGCCAGGACCACGGCGTGCGGGTTCAATATTCAGTGTTCGAATGCACGGTCGATCCCGCACAATGGACCGCGCTGCGCGCGTCCTTACTCGGCTTGATCGAGCCGCAGACCGACAGTCTGCGCTTCTATCTTCTCGGTTCGTCGGCGCGGCACAAGGTGGAGCATGTCGGCGCTCGCACACCGACCGATCTCGATGGGCCTCTAATTCTGTAATTGTCAGCGCCTGTGCGAACCCCAAGCTCCCATGCATGCTCCGGGAGGATTCGCGCTCCAGAAAAGTCAAGGCTTCTGAATGCCTTGGCACCTACGCTGGCAATGCGAGACGGTCGCTCTTCCATCAATCACATTCGTTCGCATATTGGTTGCCGTTTTGCATGTACAGTCAATAGCTTATACTATGGCG # Right flank : CGTGTGCCGCAGGTAGGTGGTGTCCCACACGGCGATGGGTGGACGGACAAAATGACGGACGGGCGGCAAAGCGGGCAGGCGTCCGGTTCATGGTCTACCGAACCGGACAGTTTGCGCACTTTCGTGTCGTCCCCCCGAGCCGGCGTGGCGGGGACCACCCGGCGTCGCCCTGGCAAACCCGGTACCCGCCTCCTTCCAACCCGCCTCCTTCCAACTCACCACCGTGGACTTGGCAGCGCCGTCAGCGGCCCGCGGCCCCGGTGCGGGTCACCAGGAAGTCGATCAGGCGCTGCGCCGAGGCGTCCAGCTCGTCCCCGGCGCGGGTGCAGATGGCCAGCTCGCGCCGCGCCCACGGCTCGTCGAGCAGCAACAGCGTCAGCCCGAAGGCGGCCACCAGGGGTTGCGCCGCCAGTTCCGGCAGGATGCCCAGACCCAGCCCGTGCAGCACCATCTGGCACATGGCCTCGAAACTGCGGACCTGCACGCGCACCCTCGGGGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTCCTGCGCGGAGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCTCCCGCGCGGAGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.10,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 118411-118045 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLKQ01000006.1 Azospirillum brasilense strain HAMBI_3172 CKLFCLNC_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 118410 35 83.3 30 .GG....G.T.....G.......-............ TGGCGACTCTCTCCGCCGCCCCCACGGCAC T [118401] 118344 36 100.0 30 .................................... AAAGCTCGCGCTCACCACCGTCGATGGCGA 118278 36 100.0 30 .................................... GTCCCACGGACGGGGTTGTGAGCGGAGACG 118212 36 100.0 30 .................................... AGGTTCCAGAGACAGGAAGCGCACCGCGGC 118146 36 100.0 30 .................................... CACCGCGGCGTCGTCATGCCCCTGTGCCGT 118080 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 97.2 30 GTTGCGGCTGGACCCCGATCCCCCAGCGGCTACAAT # Left flank : CGCCACGGCGCGCGCGGCGGTGACCCCGCGCCGCTCGATCTTGGACTCGCAGATTTTCAGGGCGGCGAGGGTGCGTTCCATCGCCAGATCGGACAGTTGATCGTTGCGGGTCAGCCCTTCGCCCAGCCGGACGATCCGTGAGAAGGCATCGATGACGCGAAAACCACCGGGAATTGGCCGGGCGATGAGGAGGCGGCAATTGTTGGTGCCAAGGTCGAGTGCGGCGTAGACCGGGCGCGCAGGGGCAGACGAGCGCAACCGTCCGGTGTCGTTCTGCCGCTCGCTGTGCACCTGAAGGTCCACGTCTCCTCCCCGCCATGCTTAAGGGAGTCATCTTAACCCGGTTTCACGTCCCAGTGAAAGCCCACGATTGGTCTTGAAATGGGTCAACACGCCTGCGTTGGAATTGCCCCGGCTGGGTCGCTCAAGCCGTTCGCGATCCTGGCCATACGGTCAACCGCAAGCGTGTGGCCCGGCCGATGCCCGGCGCCGGATCCGGT # Right flank : ATATCCCCGAATAACGCATTGAAATATATGCGTTATTCGGGGATTTTCGTGGACTCAACTCCGCAAATCCTTCTGCTAAAACAGCTTGAACTGCTCATAACGCGCAGCGGGTTCATGCTTTGTCCGCGCTTCCAGGCACACCATCGTCTGATATTGCCGGTCGGTGAAGGTCAGGATTTGCACTTTTCCCCTTTTCGGGACATTCGTCCGGATGCGCCCGATTCGCGCCTCGACCTGCGGGGCGCCGGCGCAAAAGCGCAGATAGACGCTGAACTGCGACATCTCGAAACCTTCATCGAGCAGAAAGTTTCGAAATTTGGCTGCCGCCTTCCGGTCGGCTTTCGTCACCGTGGGCAAATCAAACATCACCATCATCCACATCAGGCGATACGCGCTGAGTGCCATGCGCGCCCTCCTTGCGAGTGTGCGGGGAGACAAGATCGAGCGGCAGCGGCGACAGCGGCAGGTCCAGCACCGGCCGCTCGCCCAACAGCAGTTGC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCCCGATCCCCCAGCGGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCGGCTGGACCCCGATCCCCCAGCGGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], // Array 1 26931-26302 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLKQ01000089.1 Azospirillum brasilense strain HAMBI_3172 CKLFCLNC_89, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 26930 32 100.0 35 ................................ CCTACTGGGCATGATCACCGTCGGCACGGCCACCA 26863 32 100.0 36 ................................ GACGTCGACATGCTGGTGGCGGGCGTGTCCTACAGC 26795 32 100.0 34 ................................ ATCGAGTGCCGCGGTCCCTACAGCCGCGTCCGGT 26729 32 100.0 33 ................................ ACGATCACCGTCGCGGCCGGCTCGGGCAAGTAC 26664 32 100.0 34 ................................ GAGTGACCGGTTGGCCATTGCCAGAAGCTCCTCG 26598 32 96.9 35 ......C......................... ACCATGCGGGCATACGGTACCGAGGCGCAGGCCAC 26531 32 96.9 34 ......C......................... GGCGTCGACGTCGGGCGGCAGGACGGGCTCGGTC 26465 32 96.9 34 ......C......................... TCCTCACACCACCCCTCTTCGGTATCACCGGATA 26399 32 96.9 34 ......C......................... AGCCGTGCAAACACCCCGAAGGAGGAAGGACATG 26333 32 84.4 0 .C....C....G...A...T............ | ========== ====== ====== ====== ================================ ==================================== ================== 10 32 97.2 34 GTCGCCTTCCGTGCGGGGGCGTGGATTGAAAC # Left flank : GCCGGTGACCAGATGAGCGCCCCGGCTCCTACACCACGCCTCGGGACACGACCGTCTGGCCCCTCAGGCCC # Right flank : GGGGACGATCTGCCCGGCAACGTGCGCCTGTCTCCGCCCCGCCAACCCACTCACCGGTTCCGGACACGATTGAGCAGCGTCACAAATTCCTGCCGCTCAAGGAGCCCGTCCTGATTGGTGTCGGCCTGTTTGAAGGCCGAATCGACGATATCGAGAAACTCAAGAGTGTCTATTTTCCCGCCGGTTCCTGCGATGCTCGCGAACACGTCGGCCGGCAAAAATGTTTCGTCGACGGTTAAGGCGAGGTCCTTGTTGCGATCCAGAATGTAGAACACCAGCATTTGGTTGTTCTTGAACTCCATCATGGAGACGTTGCCGTTTTGATCGTCGTCGAGAAGTTCGAAGATCCGGGCGTCGCGTGAAGTCTCCACGGAAGCCGCCGCAGCGGTCCCCGCCATATGCGTGAGCGCCGCCAGAGCCACAATCAACGGGAACGCCCCTCGTGCCTTCGCGGCCATGGCCGATCTCCCCTTTCAGAGCTTTTCCCCGTCGGCCATCTG # Questionable array : NO Score: 9.04 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTTCCGTGCGGGGGCGTGGATTGAAAC # Alternate repeat : GTCGCCCTCCGTGCGGGGGCGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 6715-9250 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLKQ01000139.1 Azospirillum brasilense strain HAMBI_3172 CKLFCLNC_139, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 6715 32 100.0 36 ................................ GTCGCACCAGACGCGCCAATCCGCATCCCACCGCAC 6783 32 100.0 33 ................................ TGCTGTTGCGTGTGTCCGCTGCACTCGGAAAGC 6848 32 100.0 33 ................................ GCCGAACAGGCCCCGGCCGGAGCATCCACGCAG 6913 32 100.0 34 ................................ ATCTACCTTATCGCGGCCTACATCGCTCCAGAAT 6979 32 100.0 36 ................................ GCCACGTGCGGTGCCGGCCCGGTGCGGGGCCTGCAC 7047 32 100.0 35 ................................ TTTGGGTGCCGCCGACCCATGACGGGCGATCCCCT 7114 32 100.0 35 ................................ ATCTCGGCCTTGGGGGACGCAACCAGCTACGACGC 7181 32 100.0 35 ................................ GTTGGAAAGCGGTTGGCCTGATGATGGCTCCGGCA 7248 32 100.0 34 ................................ GCCACGTGCGGGGACGGCCCGGTGCGGGGCCTGC 7314 32 100.0 34 ................................ AGCGTCAGTCTGGTACGCCTGAACCTCGTAGGTT 7380 32 100.0 33 ................................ TATGCCCTCCGGTCCTGATGGACCGAGGCAATC 7445 32 100.0 32 ................................ ATCTGGCTGTAGGCCGTGAACAGGGCGTGGAA 7509 32 100.0 33 ................................ CTCCAGAACGCCAAGACCAACGGCATCCAGGCG 7574 32 100.0 34 ................................ GCTTCTGGAACACGACGAACAGCGGCTCGTGTGT 7640 32 100.0 33 ................................ AGGCTGTCCAACGGCCACAGGTCGGTGTCGTAG 7705 32 100.0 34 ................................ GCCTCTGCGATCTCCGCGCACCTCTCCCTCTCGT 7771 32 100.0 34 ................................ GCCACGGCGACGGAAGAGCCATGCTCGCGGTACA 7837 32 100.0 34 ................................ ACCATCACAGCTTGGTTCCGCTCATGAGCCATTG 7903 32 100.0 34 ................................ GCCACCATCGCGCGGGACACCAGATGGGACGAGG 7969 32 100.0 33 ................................ TGCCGCCACCGCGCCGCCCTGCAAGTGATCGAA 8034 32 100.0 37 ................................ GGTGCAGCCACCCACGCAGGGCGCGCCGCAACACCCC 8103 32 100.0 32 ................................ ACCGCCGGCACGAACGCCCGACAGACGGGCGG 8167 32 100.0 35 ................................ GCCCAGACGGCCGCCGCGATGATGCCGCCGGCCAG 8234 32 100.0 33 ................................ TGCATCTGCACCAGCGCTTGCGGGCTGATGCTG 8299 32 100.0 33 ................................ CGGGCGGCACCCTCTACCTGTCCCGGCTCCGCG 8364 32 100.0 32 ................................ ACCTTGCCGACCATCTCGGCGGCCCTGTCGTT 8428 32 100.0 37 ................................ CCGCATGACCGCGATGGCGTCGGCTTGGGTTTCGATC 8497 32 100.0 33 ................................ AACGTCGGCAACGCTCGGAACCGGTGACACGGC 8562 32 100.0 34 ................................ CCTTTCCTCGACCGACATCCGAGCGACGGCATCG 8628 32 100.0 34 ................................ GAGTTCGGGGATGCGCTCAACGAGGTTGGTCAAC 8694 32 100.0 34 ................................ ACCTGTGGCTCTGCCTGCGACGCCGACCTCGCCA 8760 32 100.0 34 ................................ CGACTGCGTGCCTTGCTGTGGTGCCGGCGCTGAG 8826 32 100.0 34 ................................ AAGCGCACAGCGATATACAGCGCAAAGAAGCCGA 8892 32 100.0 34 ................................ GGCGGTCTCAGCCTCCTCGGCAAGCCGGGCGGCC 8958 32 100.0 32 ................................ GGCCTCGACCGCCTCTTTCCGCACCGTGGTAT 9022 32 100.0 34 ................................ ACCTCGATCCCCAGCGACTTCAGCAGCGCGGCGC 9088 32 100.0 32 ................................ TTGGCCCCGTGTACATCGACCATTGGCTTTAC 9152 32 100.0 35 ................................ GTCGTCACCCCGCGCTCGGGATACTGATCATGCGC 9219 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 39 32 100.0 34 GTCGCCTTCCGTGCGGGGGCGTGGATTGAAAC # Left flank : TCCGCCTGTGGTCGGTTTACGGACGAAAACTCACCGCGATCTGCCCTCGGGAGGCGATGGTGCTCATGACTTTTCCGAGGGTGAGTGGACGGCGGTCCAAACCGCCGGCAGTTCGGCTTGTCCCATATGCTAATCTCAGGTTGCTGCGATCGAGCGCTGGAGGGGGCGATCGTCGCCGCCGATGTTGCGGACCGGGGTTCGCTTGGCGTCATACAGCGTCACCGAACCGCAAGAGGTGACCGGAACCGGACTCGTGCCGACACGGTCCGCCGCATTGAACATGTGGGTGCCAAACCGGTTCTGGACCTCGGCGGTGCTTTGGTCTTTTAATCGGCGCGAACCGGAAGCGGGCACAAATCCCCCGGAGGGTTCGCACATGATTTTCATCAATGACTTGTGCGGTTCCGAAGCGAAAATGGCCGCACCTCCGGCCGCTCCCGATGGAGGTGCGCGCCGGTTGGGGGATTGTGAGTTCTTGGACAAGTCCATAAAGTTGAGGG # Right flank : CTCCCGAGAGTGGGTCTGGCCGGTCACGTCCCTGAACGTGGTGTAGGAGCTGTGGGGAACCGGCCCGCCGAAGCGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTTCCGTGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : NA //