Array 1 610606-611951 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQHF01000034.1 Pseudoalteromonas peptidolytica F12-50-A1 contig032_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 610606 32 100.0 33 ................................ TCGTTCAAGCCAGTATCTTTTGCCAAGCGCATA 610671 32 100.0 34 ................................ GGTAGTTTTAAAAGATCCGTTTACGGTAGGATTA 610737 32 100.0 34 ................................ CGCCCGTCATAACGATAATCGCCATACAAATCAA 610803 32 100.0 35 ................................ AGCACCTCTCCACGCCACAAGTCTGAACTCACTTT 610870 32 100.0 33 ................................ AACTTTATTAAGTGCATCCCCCGCAAAGTCCAG 610935 32 100.0 34 ................................ TTTGGCATCATGCCTAAGACAGCCGAGGCGGATG 611001 32 100.0 33 ................................ AGAAATGGTGAGCGGTGCGCGGTTCACTACATC 611066 32 100.0 33 ................................ ACTATCGTGACTAATGATGTAATCATCGGGAAA 611131 32 100.0 33 ................................ CCCGTGCCCAATCTGCCAATCATTGGCTGGGGT 611196 32 100.0 34 ................................ CGGTTAAAGGGCGCGTCAATGCGGCTGGCGCAAC 611262 32 100.0 34 ................................ CTATATTTAGCTTTTAGGAATAGCTAGGATTTTA 611328 32 100.0 33 ................................ CAAGTTGTTATGCACTCTTGTCAAACACGACTG 611393 32 100.0 35 ................................ TTAGTCGGGCATGTAACCAACCTCAATTATTAGAG 611460 32 100.0 34 ................................ ACGAATTGCGGTCATAGTTTTTCCTCCCAGATCA 611526 32 100.0 33 ................................ ATCAATCAGATTTTGAGTGATAATGGCACTTCG 611591 32 100.0 34 ................................ GCCTGTATTTGAGTATGTATCTATTGAGTTGAGA 611657 32 100.0 34 ................................ AAAATACCACGAACCCAGATGATGGCGATGATGT 611723 32 100.0 34 ................................ TCTATAAGCTCTATCAAGCCGCGCTCGTCTTTGC 611789 32 100.0 33 ................................ ACTTAACCTAACGGAAGGGTGGGCGGAAATAGT 611854 32 100.0 34 ................................ ACAGTGTCGCCCTCAGCTACAAGAGCGATGCCTC 611920 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 21 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : GCGTGTGCTTGAAGTAACACAGCAAGACCTAGATTGGCAGCAAAAGCTGCACACGTTTCAAGCGCAAAAACAAACCATTTTAGCCGAGTATGGTAATACCCCAATGGCAACAGAGCAGATTGAAGCCCTATTAATAAAGAGTTTTACTGAAAATGAACGCAAGCGAGTGGCTGTATTGACCAAATGATCCATGCTGATAGGCACAAAGCGTGTTGTAGCGTGCGTTGTTAGCTGTACTGACAAATTATTGCTGTATATAAGTCGCGATTGACAGGGGTTAAGTTTTTTACATAGTGTATGGTATAAAATATGAAGTCGATTAAATCGCTAGGGCAGCGTACTCATCAAAACCCCAGGGATCTAGCGATTTTATAAGTTATTTAAAAATATGGAAAAACTTCTTTTCTTTGTCAGTTAAACGGGCATTAAACCCCATTTAACTGATAGTTAGCGGAAAACAACAATCCGTACTAGGGTTGTTGTGCCTTGAAAGCAAGGCT # Right flank : CTTCCATGCTTCGGCTCGGGCATACTTTGAAATATTGTGTCGCGTCTCCCGCAGGCGCATAAGGTTATTTTCATTTGAGGGCTAGCATAACAAAGGAGTAACGCTTTAAACTTTTTGCCTAAGTCACATATCAAGATAAGGTGTAATACCAATTTGACTTAATACTTGCTAAATTTGAAGGAGTAAATCTGACGCTAACAGCGTTAAAAATTTCTCATTTAGAACAACTAAATAGCAAAATTTTTGCCTTGCCGACAGGACGTAGGTACCTCGGCGTGAGCAGGACGCGGAAGCGGTGTTATCGACAAGATTTTCTCGCCTCAAAATAGACCACTTAATTAAGCAAATTGGTATAACAAATGAGAATTGAACCAGATTTATGGCAACTATACTTGGATGTGTATTTTAGACCAATACGGCCACTGCGCTTTGAAGCTTCAGGGGCGATTATCAGCCTCTGGAATCCTAGCGGTGAGATACAAAGTGCAACTAAGAATGAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 2 788810-790498 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQHF01000034.1 Pseudoalteromonas peptidolytica F12-50-A1 contig032_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================= ================== 788810 32 100.0 34 ................................ ATGTTGAAAGTTCTAAAAATTTTATCGCACAGCA 788876 32 100.0 36 ................................ AGTGCATGGAGTAAACATCCTAATTACAGACCAAAA 788944 32 100.0 33 ................................ ATGCCTGTGCTGTCATACTTACCGCCATTGTTT 789009 32 100.0 34 ................................ CATGTGTATCATTGCTGCAATGACTCGTGTATAT 789075 32 100.0 34 ................................ ATAGCACCACCCTTTTGCTTGCGCTCATGCGGTT 789141 32 100.0 34 ................................ GCCGAACGCATGGGGCGCTTTGCGGAAGTGGAGT 789207 32 100.0 33 ................................ TACGATTGAATGACTCATGGTTCACCCCTCAAT 789272 32 100.0 34 ................................ CGACCTTTAAGGCGCGAGATTCGGAGCGTTCACC 789338 32 100.0 34 ................................ GTCATAATCGTCAAGCGCTGCGGTCTTAACGTGA 789404 32 100.0 34 ................................ TTTGGCATCATGCCTAAGACAGCCGAGGCGGATG 789470 32 100.0 41 ................................ GAAACACGTATCTACGTCAACGATTAGAGAAATGATTTTAG 789543 32 100.0 34 ................................ TGGCTTTGCGTGAATTTGAGTTTTTCACCGGGGA 789609 32 100.0 34 ................................ CCACAAGCATCAAAATCAATTTTATCAGTGTTAA 789675 32 100.0 34 ................................ GAAGAGCAAATGGAACTGAGTATTGGACGGCAAG 789741 32 100.0 33 ................................ TACCCAAAGTTAAAAGCATTATCAGTGGAAGAA 789806 32 100.0 34 ................................ CAGCCAGACCAATCTGCATAATGGTCAATATTAA 789872 32 100.0 35 ................................ ATGAAGGGTTTAGTCCCACTATTTACAAATGTACT 789939 32 100.0 34 ................................ TCAGACTGATTTTAGAGTTTTGAGCTCTAAAAAC 790005 32 100.0 36 ................................ TGGTCTTTTTCATCCATAACGAGCAATTGACCTCCC 790073 32 100.0 33 ................................ TCAGGAGTGATTTCTGCACCTAGCTTTAATGAA 790138 32 100.0 34 ................................ GTTTATTTGACTACGCCAATCTCAGAAAAGATGG 790204 32 100.0 33 ................................ ACCTTGGCTTGGTTATGGGTAAATATTCACCTT 790269 32 100.0 34 ................................ AGGGGGGTTTGATACGAGTAGTGATACTATTGAG 790335 32 100.0 34 ................................ AGGTTCTAAGCGAGGGCTAAGGGGACTTACTGAT 790401 32 100.0 34 ................................ CTGGACGTTTTTACCCGTGACCGTTTGCAGCATA 790467 32 93.8 0 ...........................AC... | ========== ====== ====== ====== ================================ ========================================= ================== 26 32 99.8 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : TTTGTGATTAAAAAATAAGGATTATGAACCATGATGGTATTGGTCACTTACGATGTCTCGTTTACTAGTGAAGATGGGCAAAAGCGCCTTAGGCAATTAGCAAAAGTATGTTTAGATTATGGCGTTCGCGTACAATACTCTGTATTTGAGTGTGAAATAGATGCAACACAATGGCTTATTTTTAAAAATAAGCTTTTATCTATCTATGACCCTGAAGTCGATAGCCTGCGTTTTTATAAACTAGGCAAAAATTGGCACAACAAAGTTGAGCATCATGGTGCTAAAGTTGCGTTAGATATTTTTCGTGACCCATTAATTTTGTAATCGCTAGGGCTTGGTTCTCATGAAATCCCTGTGGATCTAGCGATTTTATAAGCTCTTTAAAAATATAAGAAAAATTTTATTCTTGGTGATTAGCACTAAGGATATTGATACATTTGCTCATGGCTAGCGGAAACCTCTACACCATGATAGTGTATTTGTGCCTTTGAGAGAAGGCT # Right flank : CCTCAGTGAGTAACGTGAAATTCAGTGTTTAAGCTGATTGTGTCTTTGTTTGGTAAAGGAGACGTAATGGGTTTTTGATATGTTATCGCGTTCTAATTCGAAAGAGGAGATGGCGGCAGGGCGAGACTCGAACTCACATAATATACTGTATATAACCGTTACCCATTGGAAACACTGCCGCACTCGTCTACTTTGTCATACTATTTACAAAATAGCTAACACGTTCTTAATTGCTTTTGCAAAGTTCATGACGATTATTGGCTGCTAAAAAGTTAGGCTTTATTTCAACATCTTATTGTATAGGTGAGGTTGTAATTGTACTTACTGTGATGGTGATGCGTAGAGTATTTCCCATGTTAGGGGCTGGTATGCTTGTTAACATATTGGCATTTTGCCTCTTCTATCGTGTACTTTTGCAATTTTATCTATGTACTTTATCGTGAGAGACTTGTCTTTATAATTAACTAAATGTAATGTTTGGGTTAAATGTAAAAGGATAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //