Array 1 57539-59789 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAECUH010000006.1 Acinetobacter baumannii strain CCBH26454 NODE_6_length_179221_cov_59.397395, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 57539 30 96.7 30 .............................G TCGGCACAGGTAGCAGTTGAGCAGTCATCG 57599 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 57659 30 96.7 30 .............................A CGTTTCCGCAAATCTGCGAAATACTCGTTG 57719 30 96.7 30 .............................A TATAGTGGCATCTTCGAGAGTTAAAGGCGG 57779 30 100.0 30 .............................. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 57839 30 96.7 30 .............................G TTTGAACATCTAATAATTGAGCTGTAATAC 57899 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 57959 30 100.0 30 .............................. ATGGTGGTTGTTATAAACCGCCTAATGATA 58019 30 100.0 30 .............................. TAGAAGACGTGGACTCCCCCAACCTTTCAA 58079 30 96.7 30 ............................T. TGCGCTCTTGCGGTTATTATCAAAGACCTC 58139 30 96.7 30 .............................G CATGTGCTAAATCAGGGAAAAGAAAAGCCA 58199 30 93.3 30 ............................TA ATTATAATCGCAATAGCTTCAATACTCCTA 58259 30 96.7 30 .............................G TGCGTGAACATTATTCTTTCTGCATCAGCT 58319 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 58379 30 100.0 30 .............................. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 58439 30 96.7 30 ............................T. AACTTGCTTACGGCCAACACCTGTAATCAA 58499 30 96.7 30 .............................G CCAACTTAATAGTAGAAAGGTAATGCCCTT 58559 30 93.3 30 ............................TA CCAAACCAATCAGCAATGGAAAAACCACCG 58619 30 93.3 30 ............................TA TAAAACGCGCAAAAAAATATAAGGGACGTA 58679 30 96.7 30 ............................T. AAACTGATTTACAAGCTTGATCAGTAGGCC 58739 30 100.0 30 .............................. CATGAAGCTTATTAAATGACTGACATGGCT 58799 30 96.7 30 .............................A AGATTCTAGCCCCCTCAATTGAGAAGTTAT 58859 30 93.3 30 ............................TA TTTAGAAAGCTTGGAAAATAAAGGTGACTA 58919 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 58979 30 93.3 30 ............................TC AGGTAATAAAAAACCGCCCGAAGGCGGTAT 59039 30 93.3 30 ............................TC AAAACGTATGGGTTATTGATGCTCAAGATT 59099 30 93.3 30 ............................TC GTTGCTACGCGCCACGGCGCACCCATCGTT 59159 30 96.7 30 ............................T. GAATCGGCCGCTTTGCGTATAAACACCACC 59219 30 93.3 30 ............................TA AAATCACATCAGGGAAGTGAAGGCGAGCTA 59279 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 59339 30 93.3 30 ............................TG GAAGTCATGAATGTAGGTGTTGAGGATGGC 59399 30 96.7 30 .............................A TAGAATTAAAACCACGTTGATAATATAGGT 59459 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 59520 30 96.7 30 ............................T. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 59580 30 93.3 30 .......T.....................A CGTGAACAATTGTTTTAGCTTTGAACATTA 59640 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 59700 30 90.0 30 A......A.........T............ TTTGATCTTTACTTATTCTCGCTTCAAACA 59760 30 70.0 0 .......A...T.....T..C...AGCGT. | ========== ====== ====== ====== ============================== =============================== ================== 38 30 94.7 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //