Array 1 23203-23042 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCU010000029.1 Clostridioides sp. ZZV15-6388 ZZV15-6388_231, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 23202 29 93.1 36 ...............A............G TTATCGCTGCTTGTTCTGCTTCACTTTCAGACATGA 23137 29 100.0 38 ............................. ATGATGTTTAGAGCATCAGTTGCAGGTTTTGCATCAAG 23070 29 86.2 0 ...............A.....C.AA.... | ========== ====== ====== ====== ============================= ====================================== ================== 3 29 93.1 38 GTATTATATTAACTATGTGGTATGTAAAT # Left flank : TGTAAAGAAGATGTATTTGTAACTGAAGGAATAGAATATCAAGTAACAGATGGTGATGGAAATGTGCTACAAACTTATCCAGTAGATGATTCAACTAGAATGCAACAAGAAACAACAGCAGGGACTAAATCAAAGGGAACAACAGCGTTTGCTATAACATCAGACTCAAATGCTGTAAAAATAATTGTAAAAGATAAAGTAAATGACAAAGTAATGGGAGAAATAAATGCTACTTTAGAATAAAAATAGTATTAGAGAAAAGAAAAAAGTTAACAGGTAAAATATTCTAAATGGATAGAATAAATTAATGTTAATTTATGATATAATGATAATATAGATATTTTGCAGTGTACGATTTTTTATATACATTGGATGTAATCATTGAAATTACTACGATATAAGCATATTTTGTGATATATCAAAAACACTACTGGTTACTCAGTGCAATTTTAATATAGTTTTATATGTGTAAGAACTGGAAATGCTCAATTTATTTTGGG # Right flank : TGAATAAACTCACAAAACATCTATATATTTAAGTAGGTGTTTTTAGTGTATTCAAAATATTTTCAAATAATTAGATAAATTTGCTAAATCAATAGACTAAATTAATAATTTTAGATAGAATTATATTTGAATAAATAATTTAACAAGGGAGATTATATTATGTGGGGAAAATTTAAAAAATTAAGTTTGTTGAAAAAAATTTTAGTAATATTTTTAATATATCTTATTGTATTTACAGTATCTATGATGATTCACCAAGCTATACAAGATTCAAAAAATAAAAATAAAGTAGTTGAAAATAATGTAACAGAAGAACATATAATTAGCAAAGAAGAAAAGGAAGCCATTTATAAAGAAGATATGCAGGCAAAAATAGATTCTCTTATACCAGAGGATTTAAAAGATAGAACCAACTACTATGTTAACATATCAACTCCAACTGAAGGAGATGGATATATAGTTAGTATTCAAGTGTCTAATGCTAAATTTAATGATGAAGG # Questionable array : NO Score: 3.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.19%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 15838-16198 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCU010000039.1 Clostridioides sp. ZZV15-6388 ZZV15-6388_241, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 15838 29 86.2 40 .AG..........A.T............. GTATTATGCAATTTTCGGATGTCCTTATCTAGGACAGCTG 15907 29 96.6 36 ........C.................... TCTATTGTTATGTTCTCATCATCCATTGTTAGCACA 15972 29 100.0 37 ............................. GCTTTTAAAGAGTTAAGTGAAAAAATAAATATTGAAG 16038 29 93.1 37 A...........................T GCAACTATCCAAAAAATTGGGCATGCCAAAATAGCTT 16104 29 89.7 38 T..............T............T GTTGGTTCAATTTCCAAATGACTTAGACAGTGATTATG 16171 28 79.3 0 ...............T....-.AAA...T | ========== ====== ====== ====== ============================= ======================================== ================== 6 29 90.8 38 GTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : ACAACTTGCTGTTTGTGAGATTATTAAAAAGATTGATTTAGAAGAAAACGAAGTCAAAGGAGTTTGGGAGACCAATGGTTCTTGGACTGGTACTGTAAATAAATATACAAAGAGTGTAATAGATAAAATAAGAAATTGGATAGAGGAAAATAATAGACCTACTAAAATTCCAAGTGAGAAGAAGAATTATCATGTAGTGTATAAGATTGAGTAAATTTATCAGTTGTATTAAATAATATATTTTAGTTTATTTTGGGGGTTAATACAATGTGTGAGAATTTACTTGATAGTATAGATATTGAAAAGAGAAAAGAAGAATGTAGAATTAAACTTTTGAAAATAAGAGAAACAGATATAGATATATATAATAAGATAGAAAGTATAGTATATAAACTTTCTGAGAAAAAATTAGAGAAAAATAATAAATAGACATATAAAGCACTTGGATATTCTACTGTTTCAAGTGCTTTGTATGTTAAAAAATGGTATAATGGAGGTAA # Right flank : TAAATAGAAAAAGGAAGCACTTACTATTTAAGTAGGTGCTTTTGTTATTCTTTGCTAGATAAAGTAACAAGTTCATTAGGTGTACATTCAAGAACAAGGCAAAGCTTTTCGAATAAATCTAATTTTATAGAACTTGTTTCATTGTTAGCTAATTTCATCATGTTAGGATAAGCTATACCTACTTCTTTAGCTAACCAATATCTAGTTCGACCTTTGGATTCAAGTAATTTATCAATGTTAAAATACATTTTTTCACCTCTTAAGTATATTATACAACGATTATATAATGTTTGCAATATATAATATGTAAATAATATAATTGTATAATGTTTACATTATATAATGCGTACGATATAATATACTTAAGGAATAAAAAATAAGAGCCACTCGCCCCTACCAAGTTTGAGTAACTCTTATTGACATATACTACATATGCATTAATTATAGTATATGTCATTCCTTAAAAAAAATCAATTAAGGAGTGTGTTTTTATGAACAAT # Questionable array : NO Score: 3.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.48%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [5-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 17972-18394 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCU010000039.1 Clostridioides sp. ZZV15-6388 ZZV15-6388_241, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 17972 30 100.0 34 .............................. TTTGCTAGTTCCCAGTTAGCGCCGTTTCTTAATT 18036 30 100.0 37 .............................. TCTATTTGAAATACCATTTCCATATCACTATCTTTAT 18103 30 100.0 35 .............................. AAGTGTGGTTGAAAGAAAATAATAATCCTATCTCA 18168 30 100.0 35 .............................. CTAAATCCAAAATTAATAACACAGCACCAAGTACT 18233 30 100.0 36 .............................. GTTTTGATAGCTCAAACAATTTATACTGCAATTACT 18299 30 93.3 35 ...............AT............. CTACGCAAATGAGATTGTTAGAGTTGCAGAAATAC 18364 30 90.0 0 ...............AT............A | A [18389] ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.6 36 GTTTAAGAGTAACATGGGATGTTTTTAAAT # Left flank : TTAGTTTTGAGTTTGAGGGGGATTAATACAATGCGTGAAAGTTTACTTAATGAATATAATTTAAAAACTGATGAAGATGTAGAATACTTTGTGAAGTTTGCTAATGCGTTATATGAACTAAAACAGAATAGCGAAGAAAAATTTCAAGAATATGCAGAGATACTAAGAGAAATACTTAGAGAGCAAGAAGAGAGAGAAAATAAGTAAAATAAATAGATAAAGCGCTTATAAGTACATAAAAGTGCTTTATCTTCCAAAATATGCTATAATTGTAGTATCAAATATATAGGGTGATTACGCATCCTAAGTGTGAGATTATCCCAAGCAATTGGAATTGATACTCACAAAGATGATTACTAAATAAAGTAATTATCACCGTCCCAATAAACATTGGGTAAAAACATCTAAAATTTAAAAACACTTGGGATAAAACTTATGTACATAAGTAATTATAATAGTTTGGATGGTTTGTGTTGTTCAAGAATGTGTATTTTATGGTA # Right flank : ATTATAAAAGGAGGTGTTAAAGATGATAAGTACAAGAAAAATAAAAGTAAGATGTGATGATAGTACATTTTATACATTCTTTAGGCAAGAACAAAGAGAACAAAATAAAGCTCTAAATATAGGCATAGGTATAATACATGCTAATGCAGTATTACATAATGTAGATAGTGGAGCAGAAAAGAAACTAAAGAAAAGTATAGAAGGATTACAAGGTAAAATTGATAAACTTAATAAAGACTTAGAAAAAGAGAAGATAACTGATAAAAAGAAAGAGGAAGTATTAAAAGCGATTGAGACTAATAAAAAGATATTAGATGGAGAGAAGAAGGCATTTAAAGAATCAGAAGAATACAGAAAAGGAATAGATGAACTTTTCAAAAATACATACTTGAAATCTAATACATTAGACCATGTTTTAGATAGTATGGTTAATATTCAGTACAAAAGAACTTTAAGCCTAGTTACGCAAAGGATTAAAAAAGATTATAGTAATGACTTTG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGAGTAACATGGGATGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 20040-20800 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCU010000039.1 Clostridioides sp. ZZV15-6388 ZZV15-6388_241, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 20040 30 100.0 36 .............................. GCTGTTGTTGGAACAAATACATAAGTTTCTTCTGGA 20106 30 100.0 37 .............................. AACGTATACAGATTCTTATAGAGAAAAAGCGATAAAA 20173 30 100.0 35 .............................. ACTGAGTATTCAAAGGACATAGATGAACTTAATGC 20238 30 100.0 37 .............................. ATGAAGATGGTGAATATACATTATCGACTGATAGAGA 20305 30 100.0 37 .............................. CTTTCAATAGACTTTACAGCACTTTCTTCAAATAACA 20372 30 100.0 36 .............................. TTGCCACAATTCCCACATTTACATAAGCAATATTTC 20438 30 100.0 37 .............................. TCAATATCAACTAACACAGTTTCTTCTGCTAAAACGC 20505 30 100.0 36 .............................. GTACTTCTAAAACCTATTGAAACCATACCAACAGCT 20571 30 100.0 36 .............................. CCAATTTTTATTGTAGCTGTACTTACTCCATTTATA 20637 30 100.0 36 .............................. TTGTTAACATCCTCCACATACCAGCCAGTTCTTGTA 20703 30 96.7 36 ................G............. CTAAACCTCACACTTTGCAAAGCTCCACTTATTTTT 20769 30 80.0 0 ...A...........AG.....AAA..... | AA [20791] ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.1 36 GTTGAAGAATAACATGAGATGTTTTTAAAT # Left flank : AGATGGATTTGATAATATTATCTTAAGAAACTGGTCATATTTTGAATTGCAGAAAATGATTGAGTATAAAGCTGAAAGAGAAGGAATTGCTGTAAGATATGTAAATCCAGCATATACAAGTCAGAAGTGTTCAAGATGTGGTGAGATAGACAAGGAAAATAGACAGACACAAGCAAATTTTAAATGCACTAAATGTGGATTTGAACTTAATGCAGACCATAATGCAGCTATAAATATAGCCAGAAGTATAGAATTTGTATAATTAAATAGATATAATATAAATATAGGGTGATTACGCATCCTAAATGTGAGGTCATCCCAAGTGATTTGGGATAGGCACTCGCAAAGATAGTTGCTAAATGTAGCAATTATCATCGTCCTAGCGAATCGCTAGGTAAAAACATCCGAAATTTAAAAACACTTGGGATAAATTTGATTAATGCTAGTATTTACAATGGTTATGTTGTTTTATTTTATTTAAGAATGTGCATTTTTAAGTG # Right flank : TATTTATAAAAATACTAAAAAACACTTACTAATGTAGGTGTTTTTTTAATGAAAGGATGTGATAATAATGTAAAAATTTTACTGATATAGTATAATAATCTTATAAAATTATGTAGGGGGTAATATTATGGGGTTATTTAGAAAATCAAAAGAACCATGCTGTATATGTGGAAAAGAAAAGACAGACCAAAAAATAAAGGATGGTGCTGTTTGTATAGAATGTCTAATGGATTATATGGAGTATAAAGACAAACAATTTACTTTTAAAGATGGATTACCTACAAAATCTGAAATTCAAATCGTTCTAGATTCTAAGAAACAGAATGATTTTTTAGTTGAAAAATTTAATGTAACTAAGGAAATTAACAGTTTTATAAAGTTTGATGAAACTAATAAACTCATATATATAGAGACTAAAAGAAAAAATGGGAAAATAAAGAAAAATGTTTATAGTTTTGAAAATATAACAGGCTTTGAATTGTTAGAAGACGGAGAGACTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGAATAACATGAGATGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 19171-19659 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCU010000040.1 Clostridioides sp. ZZV15-6388 ZZV15-6388_242, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 19171 29 100.0 36 ............................. ACATAACCGAAATTTTCAAAATCAAGACCTTTAATT 19236 29 100.0 36 ............................. ATCATCAAGCCCCCAAGTTGCTGTATCTATAAAAAA 19301 29 100.0 37 ............................. AAAGAAGAATATATAAATTTGCATGAAAATTGCTTTC 19367 29 100.0 37 ............................. TTACTATCTACCGCAAAAGTAACATTGCCACTATTGT 19433 29 100.0 37 ............................. TTTTGAGAACAAAATCTAGGTGTTTTTATATTAAAAA 19499 29 100.0 37 ............................. CTAAAATAGCTGATGCAATGGGAAAAACTAAAGACCA 19565 29 100.0 37 ............................. ATATTTTTCCAGTTGTTTTTAATAAAGTTTAAAACAG 19631 29 86.2 0 ....................AC.TA.... | ========== ====== ====== ====== ============================= ===================================== ================== 8 29 98.3 37 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : TTTTCATGTAGTTTATAAAATTGAGTAAATTCTATTGTATTAAATAATATATTTTAGTTTAGTTTTGAGGGGGATTAATACAATGTGTAAAAGTTTACTTGATGATTACAATCTAAAAACTGATAAAGAGAGAAAAGATTTTATAAAGTTTGCTATACTATTATATAAGTTGGAACAGGACAACAAAGAAAAGTTTTATGAATATACAGAGATATTGAGAGGTATTCTTAGAGAACAACAAGAGAGAGAAAATAAGTAAAATAATATAGATAAAGCACTTGGATATTATGATGTTTCAAGTGCTTTATATGGTAAAAAATGGTATAATATAGGTAAGAGTTTTGCAGTGTTCGATTTTTCTACTCAAATATAGTTTAACAATTGGAATACAAGGCATTGAGAAGGTTTGATAAGTGTTATCAATTGCACTATTTGTCGCTCACTGCAAATTGAGAAAGTTATATGTGTGTAAGTCTTGGAAATACACAATTTATTTTGGG # Right flank : TTAAAAATAATTCAAAAACACTTACAAATGAGTAAGTGCTTTTTTAATTGAAAGGAGGTGATTATGATGTAAAAATTTTACTTATATAGTATAATAATCTTATAAAATTATGTAGGGGGACATTGTACTATGAATGATACATTAGAATATATATTTTGTAGTGGGTGTGGGGCGAAATGTCTGAAAGAAAGTAAATTTTGCAGTCAATGTGGGACAAAAATATTTGATATAAAAAATGCAGGCGAGAGTATGACTGAAGAAAAAGAATATGATTTAAAAGGTGTTGATTTACAACATGTAATGCAAGAAACAAGTTTTATAAAAGCATCTTCTATTAGAAGGTTGAAGGAATTAACTGGAATAGATTTAGAAGACTGTAGAAAAATACTTGAAGAACCATATCGAAAGTATTATAATGAAAATTCTGACATACTTGAAGAAAAAAGAAAAAAAGAAGATGATATATCTAAAATTAGAAGAGCTAAAGAGGAAAAAATAGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 2905-3133 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCU010000057.1 Clostridioides sp. ZZV15-6388 ZZV15-6388_259, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 2905 28 79.3 36 TGAA....A........-........... TAATAAGGGTTTTATAAGTTTAATTTTTTTATTTTC A,G [2908,2917] 2971 29 93.1 37 ...............A............G AGTCCTAGCATTAAATAGATAGGTATGGCTAAATCAG 3037 29 100.0 37 ............................. GTAAATTTATTTGCTAGAAAGTCACAACTTAATTTCG 3103 29 86.2 0 ...............A.......T...GA | GA [3124] ========== ====== ====== ====== ============================= ===================================== ================== 4 29 89.6 37 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : AATCTAAGTGATAAAATTATTCTAGAGTGTGAAAATACCATTAATAATATTAGTCTTCCATCTTCAAATAAAAATATAATATGTGGATTAAAGGTTGATTTTGATTCAAAGCACATAATTTGGCAAGACAAAGGAAGTTATCTTGAATGTTATGATGATAACCTTGAATATTATACTGAAAAATATAAAGACCCAACAGTTCCTATAAATATAGAAAATACAAGTACACAAAATTTAGATATAACAAAATTAAAAGTTTATGGAGAAGCTAATTCAACATTATATATGGGGCAATATGCTAAAATAAAAATGGATTTTAATAGTTTTAGTGTATTAAAACCAGGAGAAAAATGTACTATTTATTTAGATATAATTTCCCTAGACCCGTCAAGAAGTATGACATTAACATTTTCTTATGTAGGTGATAAAGAAAACTATAAATATGAACAAGGTTTGGCAAGTAGAATATTATTTTATAATCCAGATGGAGAAGATTTTTT # Right flank : AAGTTACAATGAGTAGAAGAAGATTTCTATTTATTGTAACTTTTTTATTGCAAATTTAAAATTATAATATATTATAAAAATCATTATAAAAAGATGATTTAATAAAAAAATATAATTAAAAACTCGATTAATAATATATAAAATTGGAAAAAATAACCAACTGTCTACAAAATCTGCGTTTTTTATTACAATTACGAGTTTTTTATTGCATATATTTAACAAAAGTATTATCATGTAAGTAAGATAATTATCAAAGACAATTCTGAATAGTCTAAAAATATTTCGGGGGTTGAAAGGGTGTAATTACATGATTTTTATTTAAAATTTGTTGGGACTTTTTAACTAAAAATAAGAACATAAGTTCTGATAGGGGGATAATAGTATGGAAGAAGAAATTTGCTATAAACTATTAATTTTTTATGAGGAGTTAGAAAATTTAAAAAGGAAAGATGAGATAAAGTATAGTGAATGTAAAGAAGAATTAGAACCATTACTAAACA # Questionable array : NO Score: 3.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.48, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 57977-58463 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCU010000009.1 Clostridioides sp. ZZV15-6388 ZZV15-6388_211, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 57977 29 100.0 36 ............................. AAATGATAATGTATTAAAATCTCCCTTAAAAGGGAT 58042 29 100.0 37 ............................. CTGATAGAAAAAGAAGAGTATTTGAAAGTTGAGACTA 58108 29 100.0 36 ............................. GTCTGTAGCATTTAATGAAACAACTTCTTTTATTGT 58173 29 100.0 36 ............................. CGTTTTAATTTATCTTGAAAAACAAATTTAATTCTT 58238 29 100.0 38 ............................. AGGGATTGGACGCTAAATTGAGTTCTTATTCTGAAAAG 58305 29 96.6 35 .......................A..... GCAAGAGGTAAATTAAAATTAGGACTTTTAGAAGG 58369 29 96.6 37 ....................G........ AAGAGTTCTTTTTTCTGAATAATTCATATTATAATAA 58435 29 79.3 0 ...C............A.AA...C....T | ========== ====== ====== ====== ============================= ====================================== ================== 8 29 96.6 37 GTTTTATATTAACTAAGTGGTATGTAAAG # Left flank : ATTTTATAAATGATGAAACGTATAGAGTTTTAAAGGCTTGGTGGTAAAATATGTTTGTTATTGTTACTTATGATATTGTTGAAGCAAGGTCATTAAATAGAATTAGAAAGATACTTAGAAAATATTTGACTTGGACGCAAAATTCTGTTTTTGAAGGAGATATTACCGATGGAAAGTTACATAAATGTATTTCTGAAATAGAAAAGGTTATTGATAATAGTGAAGATTCTATCTATGTTTATGAGATAAAAAATCCTAATTCAATTAAAAAGAAATGTTATAGTATTGATAAGTATTCTGATGAAATGTTTATATAGGTTTGCAGTGAGCGATATTTATGCTAAAATAGGTGTTAACAGTTGGAATATAAGGGATTGAAGGCATGTGATAACTATTATCAATTGCACTACTGATCGCTCACTGCAATTTTTAATATTTTTATTGAATTATAATTGCTTGAGTGTAGTATTTTCAATGTATTCAATTAGACATATTTTGGG # Right flank : TAAAACATAAATATTCTATAAATCTTGATAAGAAAGTAGTAAAAAATGAGGTGAAATAAAATTTATGATAAGAAAATCAAATAACAAAGATATAGAAAAAATAATGGAAATCTGGGAAGAAAGTACAATCAAAGCACATGATTTTATAAATAAAGATTATTGGAAAAATAGCTACAATACTGTTAAAAATGAATATATGCCTATATCTGAAACTTTTGTATATGATGATGGAGAAGAAATAAAAGGATTTATAAGTATTATAGATAATGAATTTATAGGAGCTTTGTTTATAAGTACAAATTATCAAAGTCTAGGAATAGGAAGCAAACTTTTAGATTATGTAATTAAAGAGTATAAAAATCTAAGCTTAGCAGTATATAAAGATAATAAAAAAGCAGTTGTATTTTACAATAAAAAAGGTTTTAATATAGTAAAAGAACAAGTAAATGAAGATTCAGGATTTAAAGAATATCTAATGGAATATAGTAAACAGCTTTAGT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAAGTGGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //