Array 1 802366-800478 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYNE01000001.1 Photobacterium kishitanii strain FS-8.1 CFSAN065469_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 802365 28 100.0 32 ............................ TTTCGTTACCTCATCCATCATATCCCAAGTGA 802305 28 100.0 32 ............................ TTGACTAGCATCACCAGGGTTTGGGATGAACT 802245 28 100.0 32 ............................ AACCTCATCTTCTAATGAAGTCAAATAAGAAC 802185 28 100.0 32 ............................ CGTTGTTATTTCACTTCCTAAAGATAATCAGC 802125 28 100.0 32 ............................ TGAACAAAAAAACAAAATGATTGAAAACACTA 802065 28 100.0 32 ............................ AACAACCAAATTGAATAATTCAGAATTAAACT 802005 28 100.0 32 ............................ AAGAATATCTGGTATTGCTTGATATGGTCTAG 801945 28 100.0 32 ............................ AGCCGTACGAGCAATAATATTTATAATATCCT 801885 28 96.4 32 ..............C............. ATTCGAGAAAGTATTACCATCAACAACCTGTA 801825 28 100.0 32 ............................ TAACGATGAGGTTTACATAGGGCACTTTGATA 801765 28 100.0 32 ............................ TACTTCGTTTGTGGTGTTTTTGTTGAGTGCCG 801705 28 100.0 32 ............................ ATCCCGATTTATTAGATGCTTTTATTAATATT 801645 28 100.0 32 ............................ ATTCGCAATAGTCACTAACTGATTAGGGTTAA 801585 28 100.0 32 ............................ TATTTCATAGGACTGGTTAGTAATTTCAACGC 801525 28 100.0 32 ............................ AGGAGGATAATTATTAAACCTCATGCCGAATG 801465 28 100.0 32 ............................ ATAGATAAAGTCATTGCTAATGAAACCACGGA 801405 28 100.0 32 ............................ AGAGAACAACTCATGATTTAGCGGGATAGGTT 801345 28 100.0 32 ............................ CAGCTATACACTAGCAATCGATGCAGTAACTA 801285 28 89.3 32 .C............C...A......... ACAATGATTGTTAAATATTTGTTACTTAGTAC 801225 28 92.9 32 A...........G............... TGTCAATTTACGATCTAAACGGCTCTTATGAG 801165 28 96.4 32 ......T..................... TGATGCAACTGACGACCTAAAAACACTGATGT 801105 28 96.4 32 ........................A... GACAACATTCGTCACCGTTATTTCATTTACTT 801045 28 100.0 32 ............................ AGCTTGATTGGGATTGAATTGATTTGCTATAG 800985 28 96.4 32 ..............C............. TACTTTGGCGTGAACCCTTACCACTTTCATAC 800925 28 100.0 32 ............................ TGTTGTTTGAGTTCGTTTTTGTCGAGTGCCGC 800865 28 96.4 32 ..........G................. CACAATAACCGGAGAATTACCGCGTAATCGCG 800805 28 89.3 32 ....T.........C.........A... AGCGTGGTGAGTCATGTACCCCTGACCAGTAG 800745 28 89.3 32 .......A........AT.......... TGATGTTTCCTTGACGATTGTTGGCGCTCAAA 800685 28 100.0 32 ............................ CCAATTCGCCTGTGTTGAGTCTTTTGTGATTG 800625 28 92.9 32 .............G..........A... AGCGTGGTGAGTCATTTACCCCTGACCAGTAG 800565 28 92.9 32 .......A.........T.......... AAAGATGATCGTAACAAAGCGACCACCTGAAA 800505 28 92.9 0 ..A........................A | ========== ====== ====== ====== ============================ ================================ ================== 32 28 97.5 32 GTGTCCCGCCACATAGGCGGCTTAGAAG # Left flank : AGACTTTAAAGGTGCAAAAGGGTTAGAAGCCTTAGCAAATTGGCTGCAAGATCCCAAAAAAGCATTTAGTGATAAACCTTCGCAAAATAGCAATACCGAGTATTACAAAGGGGTTTTTGATGCCTCTAAATATGGTGTCAGTACACGATCACCAGTGCTTACACAGCGTTATGATGGTGTGTTTGAACTGTATATAAAAAGTGATGTAGAAACTGAACAGTTGATTATGGATAAAATCAAACACAGTGGACGCCATTACTTACGTGTTGGTAAGTTATGTTTAGCTGAATTAACGCAATTACCTGCCCGTATCCCTTCAAGTTATTGGGAAACGGTTGAAGATGATGCAGTCAAGAAAGGTTAAGTGAAATACCTTTTTTTATTTAAAGTCTATAACGTATTGATTCTAAAGGGTTGCGCAATCGTCTTTAAAAAAGGGGTAAACGCATTTAATTTAATTAAGATTCTGTTTTATAATATTTTTTGCTAATTTCCCATCA # Right flank : GAGTTACAGTGACCAGAACCTTCATCACAAATATCCCAACAACCGATTAACAGCCAACTCCACTTCTTGCTCATCATCAAAGTAACTATTCAAAATGCTATTCCACAACACCCCGAACGATGCTTGATATAACTCACTGAACTCAACATCATCCATTTTGGCAAACCGAATACTCTTGGCCTCTCTGCGAATAGAACCATTAGGCAATACAACTTGGTCATACCAACCAGCTTCAACAATCACCCATTTTCGATACGCTTCAAATGACTTTTCAGTTTCAAGTTGCGCTCTATGTGCTGATAGATGGTCTAAATAGCCACTCGCCATATCTTGCAGTGTTTGTTGTTCCCCACCGTATTGCGCCAGCATCCGAACAAAGCGCATCAATAGCCCTCGTTCTGCGGGTGATATTGTTCCTCCTGTTGGATTCCAATAATCAAAACCTAAGTTCAATAACGCAAAATATTTACGATGAAACATTGGATTGCGTAACGTTTTAA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCCCGCCACATAGGCGGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //