Array 1 685-473 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZPQ01000033.1 Martelella alba strain BGMRC 2031 Scaffold28_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 684 29 100.0 32 ............................. GCTATATCACCCGGCAATCACATGACATGTAC 623 29 100.0 32 ............................. GATTGGATTCTCTGGGAGAGGTTCATCGGGTG 562 29 100.0 32 ............................. TGCTTTGTCATGATGGGGAATTTACGCTCTAC 501 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTGGAAGCCTGGCTCGCGCTGGTGCCCAGCCGCTCGGCGGCCTGGGCGAAGCTCCCCAGTTCCAGCACCATGACGAACATTCGATCGCAATCCAACCGATCCATCTTTAGCTCTTAGACGTATTGAGGTTATCGGCTCATAGTATCATTCAGAGCAGCGGAAGTGGCCACAACTGTCTCCTGCCGATGGATAGGGCAATGTCTTTTGATGTTGTTCATTAACCGATATGCAATGTGCAGAGAAATGCTACGGCGAGCAGGTGAGGGATGATAAGAACAAGAAATTTTGCTCACCAGAAGCCTTGAGATGGCATGCCAGTCTATTAGGCTACTGAAAAATAGCGTATTTTGGTAAACGGCGTCGGGGTTAAATCACTTTTTTATAATATTATGAAAAATAACGAATTTTTGTTCTTTAACAATGAGGAATTCAAAGAAAAATAATCGGTAGAATTTTTATGGGATAAAAAAATAACTTAAATCAGAAAGATGTATCGAGA # Right flank : GAAACCGCAGACCAACAAACGACCGAGAATTTAGGGTGTGCCCCTTAACTTAACAATCGATTCAAAAATAACCTGATCGCTCCCGGTTTTAGCATACTCAGATAGTTTCTCGCTGTTTTTTCCGAGCGTATAGCAATACGTCGATTTTCTTTTAGGGTGTGTCCCGTAACTATTTTTTGTACAATCAGTTCTATGATTTACCCACAAAAAGTCCTTTAATTTGGCTCGTTACGATTTCCCCGATGAGGCATGGGCCCTGATTTCTCACATGCTGCCACCTGAAAGAGGCTCTTCCAAAGGCGGGCGTCCTTACTTTGCGCTTTGCGCACAGACACGCCATGAATGGCATTTTTTGGGTACTTTGCTCTGGCGCTCCCTGGCGGGATTTACCTGAATGTTATGGTCACTGGAAGACGATTTACAATCGCTTTAATCGGTGGTCTAAAGCGGGAGTAATGAGCAGTATTTTCAAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 9495-7694 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZPQ01000033.1 Martelella alba strain BGMRC 2031 Scaffold28_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 9494 29 100.0 32 ............................. CTCTACATCGAGGTTCGGGAGGGCGACCGCGA 9433 29 100.0 32 ............................. CGGGGAGACAGCGAAGATACAACGCTATAATC 9372 29 100.0 32 ............................. TACCCGGCCATGCGTTTGTCCAGTACATCCAG 9311 29 100.0 32 ............................. AACCGGACGTTGGGTAAACGAGAGGTGGAGTA 9250 29 100.0 32 ............................. TTCGAAGAACAGCAATACGGGGAATGGAATAC 9189 29 100.0 32 ............................. CACTGATATTACAATAATAATGCTTTGCACAT 9128 29 100.0 32 ............................. TCATGAAATTGACAAAAACTTTATCCCCACTA 9067 29 100.0 32 ............................. ATTATGCAAATGCGACGGCCGGAGTACTATGC 9006 29 100.0 34 ............................. CGTTTGCTTGTCAGTCATGACTCGCCCCCTTGTC 8943 29 100.0 32 ............................. CATTCCGGCAATTTGCCAGTCTCTACCATGCA 8882 29 100.0 32 ............................. AGATTTTAAATGCTGGAGCGTGCTCATCTGGA 8821 29 100.0 32 ............................. CAATTTTTCGCAAATATATTCATCGGTCGGAT 8760 29 100.0 32 ............................. AAAATAATTCTCAAATAATGCAAGGATTAAGC 8699 29 100.0 32 ............................. TTTTGTCGCCGTTTATTGCGAATGCAGTTTGA 8638 29 100.0 32 ............................. GGGAAGAAGGTCTTCGAGAAAGTAAATTAAAA 8577 29 100.0 32 ............................. CAAAATGATGACATATTAAATCAAGAATTTAA 8516 29 100.0 32 ............................. GCGGCGAATCAACTCATAAACCATCGGAATTA 8455 29 100.0 32 ............................. TTTTGGCGTTGGCAGACGATGAGCAGTTTCCT 8394 29 100.0 32 ............................. TTTACACAAGAATAGAATCATCGGAAGGTGAT 8333 29 100.0 32 ............................. TAAAATTTATTCATAAACAAAAATTTGAATAA 8272 29 100.0 32 ............................. CCACTAGATTAATAAGAACATCACCCATTACA 8211 29 100.0 32 ............................. CAATTTATTTAGGCAAGCCACTAGATTAATAA 8150 29 100.0 32 ............................. ATACAAAAAGATCAGATTTATCATCTGGTAAA 8089 29 100.0 32 ............................. TTTATTTCTTTTCTTAATTGCAGCATTTTCAG 8028 29 100.0 32 ............................. AAAACAACTCTCCGTCATGTGAAAATACAGGG 7967 29 100.0 32 ............................. CATTGCCTATTGAGAAGCGCGGCTAATTACGG 7906 29 100.0 32 ............................. AAGAATCGGGAGAATCGGAAGACGAAGAAGAA 7845 29 100.0 32 ............................. CTTATCCAAATTTTAAATGCCGGCGAATGGGT 7784 29 100.0 33 ............................. TGGTTTATTGGTTTATGGATAAAGAGTTTAGTG 7722 29 96.6 0 C............................ | ========== ====== ====== ====== ============================= ================================== ================== 30 29 99.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGATGTTTTGTCCGCCGGTGGTATTGAACCACCAGCCGCGCCGTTGGATGCCCAACCACCCGCCATTCCCGAGCCACAGCCGTCGGGTGATGTCGGCCATCGGAGCCACCGATGAGTATGTTAGTGGTGGTGACCGAAAATGTTCCGCCACGATTGCGTGGGCGCCTGGCGGTATGGTTGCTGGAGATAAGGGCCGGGGTGTATATCGGCGATACGTCACGTCGTGTGCGGGAAATGATTTGGGAACAAGTTAGCGAGCTAGCAGAGCAGGGCAATGTTGTGATGGCATGGGCAACCAACACAGAATCTGGTTTTGATTTCCAAACGTACGGAACTAATCGGCGTATTCCGGTAGATTGGGATGGGCTGAGACTAGTATCTTTTCAACCTATTGAAAATAAATAGTTTTCAGTTCTTTAAAAATTCAGAATTTGCTGGGAAAAGTTGGTGGATTTTTAGATGGTTAATAATATCTTTAAGATCAATAATGTAGATTAAGA # Right flank : GTCGGATTTCGCGAAAGAAATTTGGGCCAAGAATAGTCTTCGCCTATGTAGACAATCCCCTCTTGATCCTGGCCGAAACATCGCCAACTTGCCGACCATGCCGATCTAAAGGGGGACTCAAAGTGCAGGCGAAAGCATGTCACGTTTCGATATGAAGATACTCTTTATGGACGATTTCCCCGTCATTTAACGTATAGATTGCCGCTTCCGCGCTTAAGGTGACAAGCTCTCCTTTCGGGGGGGTTATGCCGGCTTTGCCGACAATGCGCCCACCTTTCTTGACCGAAAGTGTTTCATAGGTAAGGGCGCCTTGGATAACACCATGTTCGAGAACATCGATAGCGCCCGATTCGCAAATTCCGTTTACGGTACCGTCGACGACAAGCTCTTTGCTGATAATGTTGCCCTCAACCGAACCTGTGCGCATTATATTGATAACGCCGTCTTCGGCATGGATATTGCCCTGCACCGTGCCATAGATATCGATTTCTCCAGAAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //