Array 1 532-235 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKG010000002.1 Paenibacillus turicensis strain DSM 14349 Ga0454110_02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 531 32 100.0 34 ................................ TCTGTACCACAATCACAACGGCAATTGTAGTAAC 465 32 100.0 34 ................................ CTCCAATCGTGTAAACTCTCTCTCAAACTTACCA 399 32 100.0 34 ................................ ATGGCAAACATGGTGTAATGTACTATCCTAGTAG 333 32 100.0 35 ................................ TTTTTTGTACCATCCATGTATAGCCGATAACTCCA 266 32 96.9 0 ........................T....... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 99.4 34 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : CCATTAGGTTGCTTCGCCTTCAAAGGAATGTTGTAATAAGACCATTTTTCCTCAAATGGCGCCATTAATTCATATCGATAAATATCTTCCTTTTGGTCTGCTGGAGCTTGCATCATTTTACTGTAAATTTTATCTGATCGAACACATTTAATATTCATTTCATAACCCCCTATGTCAAAAACTATCTTACTTTTCTCACTATATAGTATGACGTAACGTCAGGGTCAACCTAGAATATTAACAAAGTAGCTTCACAGTATTATAAATTATTGCTATCATTATAAAAAAAGAGCGAAAAATAAATTAAAGATTCGTATGTTTAAAAAGCATTTGGTGCGAACCCCAAGCTCACATGAAAACCCCAGGTCCTCCGCACCTCGCGTCCCACAAGGGATTGCAGGTTTTTTGAGTATTTTTCAACATAATTAAAACGCTTTAAAAGCTCCTTCGCACTTTTGGGCCTGAAAACCCTTGTCCTATAAGGGCTGAAAAGTGGTACT # Right flank : TATACTTACTCAGTCGATAACATCATCACGAACGACAAGTCTCATTCCATTTCAGTGCGTAGTTTTCAGCTACATATCACAACCTACTACTTTCCTCATTTTTGCAAACAAAAAAGCCCCAACGGGCTTTAGGCGGAAACGGGACTGACCCCGTAACGTGAGACAAATTAAAACACCTTCAAGAAAATGAAACCATGTCGTAAGATATGGATATAACTTGGAGGTGTTTTTTGCA # Questionable array : NO Score: 9.03 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 3938-4236 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKG010000021.1 Paenibacillus turicensis strain DSM 14349 Ga0454110_21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 3938 32 100.0 35 ................................ TTAAAAATAGGTTACGATAAATGGTCGGCAATCTA 4005 32 100.0 35 ................................ AATTGAAACGGCTAAAGAGATTGGTTATGAAAACC 4072 32 100.0 35 ................................ TAGTGATATTCGTAAAAGTTCTCTGTCTCTTTCGT 4139 32 100.0 34 ................................ AGTAGTAAATCTGTTGCTTTCAAGCAATAAGGAG 4205 32 96.9 0 ...............G................ | ========== ====== ====== ====== ================================ =================================== ================== 5 32 99.4 35 GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT # Left flank : ATGTAATAAATAAACTTCACTCCAGTTAATTCCAAACATAACCGTTTCTCGATGCTCAAACAAATAAATGCTACGCAAAAACTCAAATAATGCGGCGTCTACCTCTTTTTGATCAATCGTATACGACATGGAAATACCTCACCTTTATGCTATATTTAACAATATTTTAGCATTTTATTTGCAATGTGCAACTAAATTCAAGGTGGATTTTGTTTTATTTTTTTCTGAAAAGAAGTTGAAAAATCTCTTAAATGTATATTGGATCAGTATGTATTCACACTAGCTAGTATTTTTGATATTATTGTAAAAAAAGGTAGACTTAAATAAACGCAAGTGCGAACCCCAAGCTCACATGAAATCCCCGGGTCCTCCGCACCTCGCGTCCCACAAGGGTTTGTGGCTTTTCGGGCGTTTTTTTGCTATAATTAAAGCGCTTTAAAAGTTCCTTCGCACTTTTGCACCTGAAATCCCTTGTCCCATAAGGGCTGAAAATGGGCGCT # Right flank : TCAGAAAGTTTCTAATGGGTAATTAAACACGTCTCATTTGCACTTAGTATAAGTATGTTTTCTACCTTCCAGCTTCGCCCCTTATTTTCCAACCTTACTTCCCTTTTTCAATCACAAATAAAACTACACCCCATTGTTCGATCCTATCCAACAATAAGGTGTAGTTTACTTATAGGGTAGCCTATCGATTTATCAAACATGGTTGTTAATAAATAATTCTTTACCAAAATAGAATAAAAAATGGTCTGTCCATTCATTTTGCCAATAAAGCTCTTGCTTAAAAACAGCTTCCTTGGTCATTCCGATATTGTCCATCAATTTTACAGAACTCATTGCATGCTCCAACAACTTTATGTGCTTTCGATTTTTCAAATGCAAATTTTAAAATTGATATTTTCGAAAGCAATACTCTTTCCCAAAAAATATCCAATCTAAAAAGATCCCCTTACTTTTCTAATCCAATAATTATCTACATTACGATTAAGTTAATAGTTTTTTCC # Questionable array : NO Score: 9.03 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 178337-178501 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKG010000003.1 Paenibacillus turicensis strain DSM 14349 Ga0454110_03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 178337 32 100.0 35 ................................ TTGAATGGCAGCAAGACACCAAACACAGGAAGCAA 178404 32 100.0 34 ................................ CTCATTGTGGCAGTCTTGGCACAGATACTCTAGG 178470 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 100.0 35 GTCACTCCTTATGTAGGAGTGTGGATTGAAAT # Left flank : ACAGGAATGTATGAACCTTTAATTGAACAGTTAGGCCACGTTCAAGCTGGACTCTTAAAGCTTGGGAATGCAAATAAGGATAAAATTGTCGATCAAATTGAATACCTTCAAAATCGTGCGATGGATGCGTTAGCTCGTTCTAATGAAGCTGGCATGCGTCACTTTGATCGGATTGAATACTCTCTATATCCACAGCATAAACCACAAGAGCGAGTGTATAATGTGTTTTATTACCTTAATCGCTATGGGGAAGGCTGGATTGATCAGCTCATGGAAATCCCGTATGATGTTACAGGCAGTCATCGTGTGATTTACGTATAAAATAATACAGGTGCGAACCCCAAGCTCACATAAAAACCTGGGGTCCTCCGCACCAATTTTATTACATTTAATGGAATTTTATAAAAATTACTAATTGATTTTAATTGCTAATACCCATTTTATACCTTCTATTTGTCCTTTTACTGGATTAAAATACTGATATTAGTTAAAAAATCGCT # Right flank : TACGACTATCTGCTACTAACTGTCCGTTGTGATTGAGTCACTTCTTACTCAGGAGTGACTACTAAGCCCCCTTAAGACGGATACTTACTCCCACGCCTTAAACACGTCACTCCTTGCAAAGGAGCACGGATCCCAACCGCTGCCTTTCAGTCCTTCTATCTTTATGATTTTAAATCCGGTCACTTTATCCACAGGAGTGACCTATTTGTTTCCATCCTGCCTCCTCCCCAAAATCTCTTACCAATTCTTAAAAAACTTTATGCCAGCTTGCAGTAGCGAAGAGACAGAGGGATTTCGGAGAAATGAAATGTTCGCCTTTAAAGCCCGATTCCTACCATAGCTACAACTCAGGGAATCGGGCTTTAACAGCGATCGTAGGAACCCTCTGGAACGAAGCTACCCCCAACTCCCATCATAAAGTTTTTTCACCATTGCTGAGAATTTTGCCCTATCCACAAGAGAAAATAGGCCACAAGCACTAATTACCCACATGTGGATAA # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCTTATGTAGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: F [matched GTCACTCCTTATGTGGGAGTGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.30,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 169554-169785 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKG010000004.1 Paenibacillus turicensis strain DSM 14349 Ga0454110_04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 169554 32 96.9 36 ...........................G.... ATAACCTCATCTGTCATACTATTAAAATCAGTATTT 169622 32 100.0 33 ................................ ACTTATTTGGTGAGTGATTCAGGAGTTACGGCA 169687 32 93.8 35 .................C.........G.... TGGTTTGCGACTTTCCAATATTACGTCATATAAAC 169754 32 87.5 0 .....................AC.T......C | ========== ====== ====== ====== ================================ ==================================== ================== 4 32 94.5 35 GTCGCACTCTATGTGAGTGCGTGGATTAAAAT # Left flank : CAAATACTCTGAAATGGACATCTGCTGGCTTGAATTAGTATGTTGTCTGAAGGATAGCGGCATGTCTTTAGACGAAATCAAAGCATTTATGACATTGTGCTTAGAGGGCTCAGCGACATGTGAAGAGCGGAAACATTTGCTAGAAGAGCATAAGGACAAAATTTTGGATCAAATTAACATGCTAAATCGTAGCTTGGGCATCATCAACTATAAACTAGAGCATTATCAAGAAATAGGAACGTTTCATATTGATACACATTAATAGATATAAGTAATGATTTGATTTGAGCAGATAGGAAAGTAGAATGTGAAATGTGTGATAAGAACTTGTTGGTGCGAACCCCAAGCTCACATGAAAACCCCGGCTCCTCCGCACCTCAAGCCCAGTAAGGGATTGTAGCGTTTTGATGATTTTTTAGGTATAATTAAAACGCTTACATAATTCCTTCGCACTTTTGCGGCTCAAATCCCTTATGGCACAAGGGGCGAAAAGTGCCGCT # Right flank : CAGTGGAGGCTGTTGTTATGAATTTCTTTACTCTATAAAGTTACAATCAATCTTCATTACATATTACTCACCACAATAATAGCCAGCACTACCACCATCAACGTTGTTCCAATTCCAGCAATTACATTAATAAATTTCTGTGCTTTTAACTGATCTTTGAAAATTTTCACTATCCCAACGTAAATAAGCAAACCCACGATACCCCCAACGGTATTGTTAATAATATCTGTAATGTCAGATGCGCCTACACCCAAAATATATTGGAAGACTTCACATAATAAGCTGACTAAAAAGAGCAGGAAAATCTTTCTCCCTGTTGACCATTTTGAACAAAGGGTTCCTATGTAAATCCCAAGCGGCATAAAAATAATGACATTCATTATGATTTCACTAAAATCTAACTTGTTATTAAGTACAAGCGATTCGTTAAAGGGGATTAGGTTGATACTTCTCATATGACCAAGGTCTTCAAACGATAAACTTAATTTAAATAAAATAAT # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //