Array 1 343015-344106 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJQC01000001.1 Absicoccus porci strain YH-panp20 panp20_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 343015 36 100.0 30 .................................... TTCGATCATCGAGGATAAAGAGACCGAGCG 343081 36 100.0 30 .................................... CCGACCGGATAAGTATATCCAGTGGAATCC 343147 36 100.0 30 .................................... TCTTCACATGGAGATTCCTTTTTCTGTTAA 343213 36 100.0 31 .................................... CCTTGGTGCTCATGTTGATGATGGCATGCTG 343280 36 100.0 30 .................................... CAACATCGTTGTAATTGACCCCCTCGGAAT 343346 36 100.0 30 .................................... GAAAATTCTATAAATTCGGATAAAGATTTT 343412 36 100.0 30 .................................... GGCAATATATGGATACAATGAAAGCACGCT 343478 36 100.0 30 .................................... ACACCAACCTCATTGATGAGCTGAGACTCG 343544 36 100.0 30 .................................... TTCTTGCCCTTTTTTTGTGCTTCCTAGCCA 343610 36 100.0 30 .................................... CGCAACGGCACGTATTTCTGAAATTGTAGG 343676 36 100.0 30 .................................... AATGACATGTCTATGAGTGCTACGTACACG 343742 36 100.0 30 .................................... ACAGACCTGGCCAATGGAACGCTGCGTCCT 343808 36 100.0 30 .................................... CTCAGGATGCACTTCATTATGGCATGAGTT 343874 36 100.0 30 .................................... CCATTGCTATTGATGGCAATCAGATTATCA 343940 36 100.0 29 .................................... AAACATGGCTAAGAGGTATAACCTTATTA 344005 36 100.0 30 .................................... TAAAAAGACAAAAGATCATAGATGGTATTT 344071 36 94.4 0 ...............................A...T | ========== ====== ====== ====== ==================================== =============================== ================== 17 36 99.7 30 GTTCTTGAGCATCCCATTTATTGGTATTATTTGATC # Left flank : TGATTTTAAGATTGAATCTATTCTTGGAATGATGCAAATTGAGGATGATCAACTAACATTGAGTGAGAAATATGTGATGTTGTATAACTTAGAATTATTTGTTCATAGAAATGAATTAAAAATCGTTTATATTGATTTTCCAGTTGATGATGAAACAATTTATTGGATTGGTTGTCAAAGAAATGATGATACTATTTTTTTGATTGATAATGAAAGTATTAATGCAGATAATCTAATAAACCTCCTACCATGTAATTTTATTAAACTATCTTCTGTCGATTTTAAAGAAGACTATGAAATTGAGAGTCATGATATTCAATCCGTGTCCTACTTATTTCATGACTATATTCTCAATAATATTAACCAACAAACAGAAAAAAATATTCGATTCTTAAACCAATTTAGAGATAAAAATACAACTTTTTTGCTAAAATTCAATGACATAAAATACGCTGAAGTCCTATAAATAAGGCACATTATGTGATAGAATAAGCTCAGAT # Right flank : TATGACTTGAGCAGGTGAATTATCAGCATAAATTAATTTTATATCATTTAATGTTTATTTATCTTATACAGATGTTTTTAAAAATGATACTTTTTTAGTTGACAATTCATCATTCTTCTTGTTAAAGTGTCATTGTACTTATACGACTGACGGAATTGTGGAGCTTACCACGTGAAGTATAAGAGATTATAGCCGACCGTCTGGGCAATTTTGTCTGGAGGTACGGCTTTTTTTGTATCTCTGGGAAGAAAGGAGTATATGAGTTGACAGTGGAATTGTTATAAGTTAGTCTTAACTTATCAATAATGTTCTATTCAAGGAGGTACAATATGAGAACAGAATGGAATGGATTTACCGGAACAAAATGGCAATCAGAAGTCAATGTTCGTGATTTTATTCAAAATAACTACACACCCTATAATGGGGATGAATCTTTTTTAGAAGGCCCTACTTCAGCAACTTCACAATTATGGTCTGAACTACAAGCTCTACAAAAAGAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTGAGCATCCCATTTATTGGTATTATTTGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //