Array 1 5606-4457 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QKXN01000009.1 Staphylococcus felis strain F6 k127_17, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      5605	    36	  88.9	    29	...........GC......A.....A..........	ATAAGCATGTGACTAAGAAAAGAGGAATA 	
      5540	    36	 100.0	    30	....................................	AAAAATTCAATACAATAAAAAGTGCAGTAG	
      5474	    36	 100.0	    30	....................................	ACTTGTTGTAACTATTGAAGGTTATTACGA	
      5408	    36	 100.0	    29	....................................	TTCTTTAAGCGTCCTCCTGAAGCAACTTC 	
      5343	    36	 100.0	    30	....................................	ACGGAAATGTGAGTATAGATCAGTTTAATA	
      5277	    36	 100.0	    29	....................................	AAGCTTTTTAGCATTGTCGATAATCGTGT 	
      5212	    36	 100.0	    29	....................................	GAAGCACAAAAGTTAAACGAACTAAACAA 	
      5147	    36	  97.2	    29	............C.......................	TATGATGATAGATTTGCTCCTATGGAAGT 	
      5082	    36	  91.7	    30	......A.....C............A..........	AAGTTCCAGCGTCAATAAATCTAAGCAGAT	
      5016	    36	  88.9	    29	...C.......G.......A.....A..........	ATAAGCATGTGACTAAGAAAAGAGGAATA 	
      4951	    36	  94.4	    30	............C............A..........	GTTTGCATTCGTGTGGGGGTTTTGGTTCAA	
      4885	    36	  94.4	    30	............C............A..........	TCTTCATCAGCTATTACTTCTTTACTTTGT	
      4819	    36	  97.2	    29	........G...........................	CGAAACAGTATATATGCCAGTGCGTATGT 	
      4754	    36	  97.2	    30	........G...........................	AGTTTGTATAAAGGTATGAAAGAATTGGAT	
      4688	    36	  94.4	    29	........G................A..........	AGAAGGCAGATACGTTGATGTAGAGTGTA 	
      4623	    36	  97.2	    30	...........G........................	AATTCAGCAACGACAAGAATTATATAAAAA	
      4557	    36	  97.2	    29	.........................A..........	TACGTTGATACGAAAGTTAACGATAATTC 	
      4492	    36	  91.7	     0	.........................T......T.C.	|                             	
==========	======	======	======	====================================	==============================	==================
        18	    36	  96.1	    30	GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC	                              	       

# Left flank :   AAGTGAAATTAACAAAAGGAAATTATTTATCGATTTACTTAAAGACGATGATAAAGAAAATGTATTACTTATATTGTACCCAGAAGCATTTTTGGGGCTCAAAGATATTCAAAGATTTATACAATTGATTAAAAGTTATCAACTCACAACCATTATAATTACAAATCATCCATCTATTATCATTGAGGAAGAAAATGTTTATTTATGCAAAAGCAATAAAGAGTGTCACTCAATCAAAGATATAAGGGAAGATCTAGAAATTCTTATGCCACAAGAAACAATTAATGACAAAACGGTTAGAATGATTGCTTATCATGAATTCATAGGTACAGATTTAAAAGAACTAGCACGATATTTTGAGTTTATTAATGATTACAATTAAGATATAATTGAATTTACTATGATAAATTAAAAACAACATGCTTTATTTAATGTTTAACTTCTTAACTAAAAAGCTAAAACCTCTAAATGGTAAAAACTATAGTGTGTATTTTTGAGTT
# Right flank :  ATTTTTTCTGAATTTTTAGATAGAATAACAATACTAGAATGACCAATTGATAATCAATAATCGAGAAATCTTAATGATACATGTCTTTTCTTTTCATTGATATAATGAAATAATATAGTCAAATATTTTTTAGAGAAGATTGTTTTATTTTATTAAGAAAGGGGAAGTTCGATGAAGTCTATTATTGCAAAACACGCTTTTAAATTGTCAGATGGGAATTTATTTGAAAAAGTGACACGTGAAAAACCAATAGTGAATGCTCATGAAGTAGGAATAGCTGTTCATGCATCAGGTGTGAATCCGATTGATACAAAGACGCGTCAAACACCACTTCAGACTGAAGCACGTGTATTAGGATATGAAGGGGCAGGTGTTGTTGAAGCAGTAGGTGAAGATGTGACACGTTTTAAAGTAGGGGATCGTGTGATGTTTGTCGGTGCACCTAAATGGGAAGGGTCGAATCAAACTTATCAAGTATTAGATGAAGCGTATATGACGCA

# Questionable array : NO	 Score: 5.55
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [7-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//