Array 1 561621-560811 **** Predicted by CRISPRDetect 2.4 *** >NZ_CTRP01000003.1 Sporomusa ovata isolate Sporomusa ovata strain An4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 561620 29 100.0 36 ............................. TTCATATTCAGAAGCATAATAATGAAAAGGTACGCT 561555 29 100.0 36 ............................. GACAGAGAGGGCCAGTTGCTCATTGATGAAATCCTT 561490 29 100.0 36 ............................. TACCCATACTGGCGAACATTCTTACCAGTAAACCGG 561425 29 100.0 35 ............................. TGTGGGGTGGAACAAGTTATGCACCGGTGATTCGG 561361 29 100.0 36 ............................. TGCGGCATACATGCCCGTAGCATAATCTACTACGGT 561296 29 100.0 37 ............................. TATTTTACACGGAAACTCGAAATCGTAAAGATGCCTC 561230 29 100.0 36 ............................. TATGCAGATTAGGTATTATATCTTCCAACGCCTCCA 561165 29 100.0 35 ............................. TCATCTCCTTAGTATATTAGGATTTCGTCCTGGGT 561101 29 100.0 35 ............................. ACAGGAACAATTGTCCTTTGGAGTGGATCTATAGC 561037 29 100.0 38 ............................. ATCAAGAGGAATTAAGTGATGAGCCTCTGTAATTTTTT 560970 29 100.0 36 ............................. TAAAACCAGACCGAAAAGAAAAGTAAAGTTTTTTAT 560905 29 96.6 37 ...................A......... GGATACCGTATGTGAACCAAAAACAAAACCGTCTTTT 560839 29 89.7 0 ...A..........C....A......... | ========== ====== ====== ====== ============================= ====================================== ================== 13 29 98.9 36 GTCGCTATCGCTCATAGAGGAATTTAAAC # Left flank : CGATACCACTATTATGCATCGTAATTTGAAGCGTAAGGTAAGATATAAAAACATGGTCAGGTTGGATTTATATAAGCTAGTCAAACATTTAATTGATGGCGAAGCATTTACGCCAATGAAAGTGTGGTGGTAGTATCCGTGTTATATTGATGTATGACATGAATACGGAGGACGCAGCGGGAAGGAGGCGCTTGAATAGAATTAAGAAAATATGCCGAAAGTACCTGATTCATCTGCAGAAGTCGGTATTCGAAGGAGCTGTAACTGAGGGTCAGTATCACAAATTAATAGGAGAACTGCGGTCGATTATTGATGATAAGCTTGATTTTGTAGTAGTGTATACTTTGCCGGATGGCAATAAGCTAAATAGAACTATTTTAACAGATACACCAGATCCTGCTGATAATTTATTATAGGTAATTTTACAAAACCGGAGGTTTGACGCAATTATTCCTAAAACATATACCCTAAGCCCGCTAAAACATTGGGGATTTTTTGCG # Right flank : AATCCGCAAGTACGTTGTGAGGCAAAAAATGGCTGCAATATACTTTTTGGGTGTTATCCCAAGATATGCAGTTGGAAAAAGATATATTGACAGTCACTAGAATTGAAGATCGCTGGCTACGACGGGAAGGTTGGCGCGCAAATTATCTGGCCGGATTGCCATGGTGTCAATTAACGTATTTGCCAAACCCGGTTTTTATCCTGAAAGTATTGCTACAAAATATAAGGGACAATGGGTTTTGCGGGAAGGGTATTATTCCACTGAACAAGGACTTATGATTGAGGGAGATACCATGAATATTTAAAATAGTTGCAGTCAGGTCGGAAAAGAGCAAGTGCGGTGTTATTAGCAAAGATTAGAAAAATTGTTATGTGGAGTTGATGGACAATGCAGGAAAAATTGAAAAGTCTTTACCAATTTCTAACATCCTATGACCAAATCAGCTCTGTATGGCTATTTGGCTCAATAGCCAAAGGTACTAACCGAGAAAACAGTGATAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTATCGCTCATAGAGGAATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.30,-1.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //