Array 1 83359-83055 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCMB010000191.1 Paenibacillus sp. HN-1 scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 83358 32 100.0 35 ................................ CTCCGACCAAAGACAACTCACTTGAAATCGCTGAA 83291 32 100.0 36 ................................ ATTCTAAATCCTCCATTTGCCCGCTGCCTTGTTGCA 83223 32 100.0 36 ................................ AAGTGGAATGAGGACCAGGTAAGGCTGCCGGAAGTG 83155 32 93.8 37 .........C.T.................... TTCCGCATCAATCCAATCCGCTGACGGCCTCGTACTG 83086 32 81.2 0 .........CGA.....A...C.T........ | ========== ====== ====== ====== ================================ ===================================== ================== 5 32 95.0 36 GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Left flank : TGCAGGACATACTGGAAATCAGCGACACAGCCCGCAAAATTGCAGCAGACATTGATCATGAGGTCGTACCCGATATTGACAGACCGAAAGGCGCACCAGACGACTATATAAAAACCAGCGATCTGATGAAGCAGGTTGACAGAAAGAGCTATGATCGAATGAATGAATTTTTTAATCAAAATGATGTGCAATCCGGCTTAAGCATCCTGATCAAATTTGCTCAACAAATCCCGGAGCATCCGGAGTGGGTTGAACAATACAAAGCTGGCAAAATCGGCTTGTCTGAAAAAGTCTAAACTGCCAACTGCGCAGGATAGATGGTTGGGTATTAGTGCGAACCCCAAGCTCCCATAAAAATCCCGGGAGATTCGCACCACTTGTGGGACAAGGGTTTTTGCGATTTTTTTGAGAAAAAGGCGACCTTGAAACCGGATCGTTCAGCGAGGTTCGCACTATAACGTTTCCAAATTGCCGCCAGGTAAGGCGGGAGGTTGGGCGCT # Right flank : CTGTTCTTCCTGGGCCGTGCTATATGCGACTCGGTCCCAACCCACGCAACAGATTTCAAAAATAAGAGTTTGAAATTGCTAAACCTTGGTTTCTGTAGAGTGTACAGACATATACAGAGGGCAAAGAGCGTCCTTAATCGGACGTTCTTTTCTATATGTTTTCTTTTGAATATCCGACCCCAAGGCCTCATCCATATCCCATTGACAATGATGGAATAAACGATATGATTAGTTTACGAAAATAATTTTCGTAAGGCTGTTATTGCGAGGGAACTCTTTCCTCCAAAGCCGGTGGGCGTTTGCCATGTTTGCCATGAATAGTTTCCAATAAAATAGAGTATAGTGAGGTTCCTATGGAGAGACAACGATCGGTAATAGATACCATCAACATATTGTACGATTCTTTTTTCGAGCAAGAAAAGAAAATTGCCAATTATGTTCTACAGAACCATAAAGAAGTCGTGAATATGACGATTGGGGAATTAGCGGAGGCAAGCGGT # Questionable array : NO Score: 8.81 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 85036-84869 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCMB010000191.1 Paenibacillus sp. HN-1 scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 85035 33 97.0 34 ................................C GTCTTACTGTTGTTGATATCTGTAATCGCCTGAC 84968 33 100.0 34 ................................. AAATCAGAACCAGAAGGTCCCGTATGATAATCGG 84901 33 97.0 0 ................................G | ========== ====== ====== ====== ================================= ================================== ================== 3 33 98.0 34 GTCGCACCCTGTGTGGGTGCGTGGATTGAAATA # Left flank : ACCTCGTGCAGATGCGAGGCAGCTTCCAGCCGCCGGTGCTGCTGGATGATCGCATGATCATCGAAGGCCGCGTGCCGCTGGCGACCTCGCTGGAGTATCCGCCGGAGCTCAGCTCTTTTACCAAAGGGCGCAGCACCTTCACCTCATTCTTCGACGGCTACGAGGAATGCCCGCCCGACGTGACCGCCGAGCGCCCGCGCCGGGGTGTGAACCCGCTGGATCAGGCGAAATACATCCTGAGCGTGCGCAAGGCGCTGCAGGGTTGAGACGAGATGGCCTGGGCTTGACACATGGCTGGGAGAGAGAGCTCTACTTCTTGAGATGGGTCGTTGGTGCGAACCCCAAGCGCCCATGAAATTCCCGGGGGATTCGCACCTCTTGCGGGATAAGGGATTTTGCGTTATTTTGAGTAAAAGGCGACCTTGAAACCGGTCCGTTCGGCGAGGTTCGCACTATAGCGCTTCCAAATGCCCGCCGGGTAAGGCGGGAGGGTGGGGGCT # Right flank : CGTTCGAAGTGTGGTATAGTAAATATAGAAACAGCGTACAATGCAAAGAGAGCCGTGCTGGTAACACGACTCTCTGAGCAATAGCCGCTTTTAAGGGCGGTGGCTTAAAATAAGGAAGGCCTCAAGAAATAGATCGCGACCTTTGACCAGGGCGGTCTATTTCTTTTTGAGGTAATTCAGCAGAGCCAAAATGAACATACCGAACATGAATATTAATGACAACGCTTGATAAACCTCCACAGGCATCACCTCCCTTCCGGGAGATTAGCCAACCGCCCAAGTCAGCCATTCTATTGCTTCTGTGATTATATCATGCTGTTCCACGAGTTGGAAAGTTATGCAACTCTCAATCAACCTTCTTGTTATTTGTGTAGTTTTACATAGATTCTGTAAAAATTAGATTGCGACTCTTAACCAATGCGCTCCATTGCTTTTTGAGATTATTAAGTAGAGCCAAAATGTTCGAGTCGAACACCCACAATTTAATACGACAATGCTTG # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTGTGTGGGTGCGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //