Array 1 1009921-1018361 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020120.1 Methanococcus maripaludis strain OS7mut1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1009921 37 100.0 38 ..................................... ATAAAATGTGTCGAGGAAAACGTATGATTTCTTTTAAG 1009996 37 100.0 34 ..................................... TTTCAGTTGATAATTCTTTCTCACCATATTTGTT 1010067 37 100.0 35 ..................................... GAGTGTGTGGCTCTGAATGTGTCGGGGATTAACTC 1010139 37 100.0 36 ..................................... TTTAACACCCCGTCATTAATAAATACACCTGATGAT 1010212 37 100.0 35 ..................................... ATTTTTTAAGCCCCCCCCAAAGAGTGAGAATATGA 1010284 37 100.0 35 ..................................... AAAGCATGGGTTGAAATGAACACAACAGAAAAAAG 1010356 37 100.0 36 ..................................... TCCCTTATGGTTTCAATTTCTTTTTTAAATTCTGCT 1010429 37 100.0 38 ..................................... GTCCATGTTAATCCGTAGTCAGTAGACCGGTAGATATC 1010504 37 100.0 36 ..................................... GATAGTTGTCTGTCGTATCTTGGATTTTCAGTTCAA 1010577 37 100.0 38 ..................................... TTAATGCCAAGCAGTTTAAAGGCTTTAAGCTCTGAACT 1010652 37 100.0 34 ..................................... ATACCTCGACTTCTACGACTCCGAGCCATCCCAT 1010723 37 100.0 36 ..................................... TAATAAGTTTTTTGAATTGTTAAAAGACGTGTACCA 1010796 37 100.0 36 ..................................... ATGGATCAATGGAACAAATGAGGTGACCAACTTGTG 1010869 37 100.0 38 ..................................... CCCATCATTCCAGGGCCCTTACCAGTTGCACCTGTGGG 1010944 37 100.0 35 ..................................... AAATTAGATGTTAAAGATATAAAAGCTGTTCAATT 1011016 37 100.0 38 ..................................... TGTGTAATCTCCCCATAGTTCTTCCCCTAAACTTCCTT 1011091 37 100.0 39 ..................................... TATTTCCTGCGAGGTCAAAAGTATAATCGAACCCGTTTG 1011167 37 100.0 37 ..................................... TCAGAAGCGGATAAATTAGTAAATAAAGTATTAAGAC 1011241 37 100.0 36 ..................................... CTCTTAAAAACTTCTCTTTATACCATTCTATAAACT 1011314 37 100.0 38 ..................................... ATCAAAGCAGTAAATAGTGAAAAAGAAGTATATGTGGA 1011389 37 100.0 38 ..................................... CTATTCTTTGAGTATAATTTATACACCCCTGCTTTCTA 1011464 37 100.0 38 ..................................... TGTATGCTTCGCTATCTCCAGAAATACGGCCTTGAATT 1011539 37 100.0 40 ..................................... GCCTTTTCGATTTTCAGTTTCTCGTTCATCTGAATGTATG 1011616 37 100.0 40 ..................................... TTTTTGATGGTTCGGTTTCAGTTGGATAGTATCGTTTAAT 1011693 37 100.0 35 ..................................... CAATTACCGACTCTGTAAGCGTTGCAATCTCTTTC 1011765 37 100.0 37 ..................................... GAAGTAATGAAACGAAAAGGTGAAATTATGAATGCAA 1011839 37 100.0 35 ..................................... GCATTTTAATGGGGATATACTGTCCCCCTACAAAA 1011911 37 100.0 37 ..................................... AATCCTCCGGCTTCATACTCATAAAATATTCATAAAT 1011985 37 100.0 37 ..................................... GTATTACAGGTAATCACATAATACCAGATAGTATCAT 1012059 37 100.0 37 ..................................... AATTTGATGTAAATGATGCAAATTCGGATATAAAAGA 1012133 37 100.0 36 ..................................... ATGATAAGGGGGAATTTGTTGGTTCAAAACCAATTG 1012206 37 100.0 37 ..................................... ATAATTTTGAAGCGGTAGATCTTGAAGATTTTTTTGA 1012280 37 100.0 40 ..................................... TTTCCTTTATGTGGAAAATCGTTGTACTTTGTATCAACTT 1012357 37 100.0 38 ..................................... TTTGTCAAGAGGTGAAAAATTGACGGAAAATAATGATT 1012432 37 100.0 37 ..................................... AAAATAAACGTTAATTCATTAAGGATTATAAAACATT 1012506 37 100.0 33 ..................................... ATAGTTTCTGGCAACGCTATATTACTATTTAGA 1012576 37 100.0 35 ..................................... CATTATTAAACTCAAGTTGTGCTTTTGTATCATTA 1012648 37 100.0 36 ..................................... TTAGTGCGATTAGTGCACTCTTAGCAATTGCAAATT 1012721 37 100.0 36 ..................................... TGTGTTTTGAATTGTTCCAGTATTGCTTCCCTTACA 1012794 37 100.0 38 ..................................... CCATTGTACTCAATACGGTTGGTGGCGAATTAGCACCT 1012869 37 100.0 35 ..................................... CTTCGGTTTTTAAATCGTCGATTTTGTTACCTTGG 1012941 37 100.0 36 ..................................... TTTCAACGCTAATTTTCATGATATCAACCTAATTAG 1013014 37 100.0 36 ..................................... GAATCTCCAAACATTGGAGTAAACCGTGCTGCAATG 1013087 37 100.0 37 ..................................... AAACTACACAAAATGCAATAATCTGGACTATTTTGAA 1013161 37 100.0 37 ..................................... CTAATAACGATTTCATAGTTTCACCTTTAATTTAATA 1013235 37 100.0 35 ..................................... GAGTTTGGATGTTGTATCCGTGGTCTAGCAAGTGT 1013307 37 100.0 36 ..................................... AAATCTAAAACATTGCATCCAACAAAGTCTCCAAGT 1013380 37 100.0 38 ..................................... TCAATGACCTTTCCATTTTTTCTTCACCAATCTAAAAT 1013455 37 100.0 35 ..................................... AAACCAGATATCTCGAAGTTCACTGATTCGCAATT 1013527 37 100.0 35 ..................................... TCGCCTTGTCCAATTGATGCATCAAGTTCGTCATG 1013599 37 100.0 36 ..................................... TTTTCACAAATTCGTTATATGCTGCAACTTTTCCTT 1013672 37 100.0 37 ..................................... TAAAAAAGAAATGATAAGACATAAAATAAAAATACAC 1013746 37 100.0 35 ..................................... TTAATGCATATGACACAGAGTTAGAATTAAATGGC 1013818 37 100.0 34 ..................................... GCATACACTGATGGCTTAACGTCACCAAATTCTT 1013889 37 100.0 36 ..................................... CTTCTAATATATACTATGGTTATACTTCTATATATA 1013962 37 100.0 36 ..................................... TATAGTATAATAAACATGTTAATTATTAGAAATAAA 1014035 37 100.0 40 ..................................... TATAATATAGTAGTCGAGGGCTACCCTGCCAGGCTTCTCT 1014112 37 100.0 36 ..................................... GAAGTGCAATGAATAGGAGGGGGAATGAAGAAGCGG 1014185 37 100.0 36 ..................................... CGATCAACTTTGGGTCTACCCCCAACACGACCTCGA 1014258 37 100.0 35 ..................................... GATACAATTATTCTCAAAAACCGTCAAGGATTAAA 1014330 37 100.0 35 ..................................... CAAACATTCCCAATTTTCGGGCAATTTCAATACAA 1014402 37 100.0 36 ..................................... TTTTCTCACTATATATGGTCAAGAAATAATTTCGGA 1014475 37 100.0 36 ..................................... AACTCACAAATCAGTTCTTCGTCATCTGTGTAGTAT 1014548 37 100.0 36 ..................................... CTCGATTGATGTGTCACAAAATGGCTTATGGTGCTT 1014621 37 100.0 37 ..................................... GCGTGGTTTGATGGCTCAGCTCAACCATATTCTAAAA 1014695 37 100.0 34 ..................................... GATACTATTTTTTGATTATGTAATAATTTTAGTA 1014766 37 100.0 36 ..................................... TCAAATATAGGAATTCCAAAGATAGCTTACGAGATA 1014839 37 100.0 34 ..................................... TAAGATATTGGAAAAAAAAGGATACCTTAAAAAT 1014910 37 100.0 35 ..................................... TTAATTTTGCATGATTAATTGTTACTATTCCTGTT 1014982 37 100.0 35 ..................................... CAAATATGGGAATTCCAAAGATAGCTTATGAGATA 1015054 37 100.0 36 ..................................... ATAACCATTCATGAAACAATGGTTGATAGGATAGAA 1015127 37 100.0 36 ..................................... ATATATCTTTCAACAACTTCTACGCTTCCTCTACCA 1015200 37 100.0 37 ..................................... CATATTGTCATGTAATCTCTAATTATTTCAATAGAGT 1015274 37 100.0 35 ..................................... CTTCTGAATAAACATTCTCATTATCATATAAATAG 1015346 37 100.0 35 ..................................... AATTTTCGTTAATAGTTAAAACAACCCCATAAGGA 1015418 37 100.0 35 ..................................... TCTTCTGTGCTGGTTTGGGGTGTAGTAATGGTATC 1015490 37 100.0 35 ..................................... TTTCGGGATGTTTCATTAATTTTGTAGCTGTAACT 1015562 37 100.0 36 ..................................... CATTGATTGATGAACCTTCAAAAATGAATAAACAAT 1015635 37 100.0 36 ..................................... ACAAAAGCCTTATGGAAGATGTCAAGATGCATATTA 1015708 37 86.5 36 ........A...CT.....A.T............... AAATTCGATACACTTTTCTCATGTTATAAACCAAAC 1015781 37 86.5 34 ........A...CT.....A.T............... ATGGAAAAAAGAGGTAGAGCAGGGTTAGAAGATT 1015852 37 86.5 38 ........A...CT.....A.T............... GGCATTACTTCATCATTCTTATTCCATCCTTTTCTCAA 1015927 37 83.8 35 ........A...CT.A...A.T............... TTCCAACAATGCAATATTCAAGACCGAAAAGCCAA 1015999 37 86.5 38 ........A...CT.....A.T............... TCTGATTTAATCGCTGATTACAAGGGGAATTTATCAGA 1016074 37 86.5 37 ........A...CT.....A.T............... TCTGTTTAGTTTTTCTTTGTTTTTCTGTATTCTATCT 1016148 37 86.5 35 ........A...CT.....A.T............... TTGTGTGCATGGTATAAACTGCACTCCTCCCCATC 1016220 37 86.5 36 ........A...CT.....A.T............... TTAGTGCCCGTTAGAGTCAGTGGTTCTGAAATAATA 1016293 37 86.5 36 ........A...CT.....A.T............... TTAAAAAGAGTTTGTTTTATTAATTCTTTTTAAGTG 1016366 37 86.5 36 ........A...CT.....A.T............... ACTGAGGAAGAAGCTCAAGCAGAATGTGACAGGCGA 1016439 37 86.5 36 ........A...CT.....A.T............... GAACCTACTGCACGTTCAAGATCTTTCAAAGGAAAA 1016512 37 86.5 34 ........A...CT.....A.T............... CAGATAGTTTAAAACTTGGAGTTATTGCCACGTA 1016583 37 86.5 35 ........A...CT.....A.T............... TAATCATATAGTAGTGTCCCCGCTGTAAGGAATTG 1016655 37 86.5 36 ........A...CT.....A.T............... TTTTTGATTTTAAAATTAAAAAAATTGTCTGACTCA 1016728 37 86.5 37 ........A...CT.....A.T............... CAGTTGCCGGCGTTAGTCATGAAACACTTATAAATAG 1016802 37 86.5 38 ........A...CT.....A.T............... AAAAGACTTAATAAACGTATCAAATTAAACAAAGTGGG 1016877 37 86.5 35 ........A...CT.....A.T............... TTGATATTAAAACTTCAGGAAACGCATCCAGACTG 1016949 37 86.5 36 ........A...CT.....A.T............... CCAGACCTATCCCGGACTCCACCTTGTAAATTCAAT 1017022 37 86.5 36 ........A...CT.....A.T............... ATTTATCAGGTATTTTTCTTTTTGACATATTGTCGC 1017095 37 86.5 36 ........A...CT.....A.T............... TCGTCGTACCTTCCGGTTAGTTTGGTTTCGGATAGT 1017168 37 86.5 35 ........A...CT.....A.T............... AGTCAAATTCCCGTCCGCCAATTGCAACAGGAATA 1017240 37 86.5 34 ........A...CT.....A.T............... CTTCCAAAAACATCGAATCCGGCGTTTCCAAATC 1017311 37 86.5 34 ........A...CT.....A.T............... ACGCAATTCTTATATCCTCTGCATTATCTATATT 1017382 37 86.5 40 ........A...CT.....A.T............... TCAGAGAATTAGACCGATTAAAAGATAGTACAATATGCTT 1017459 37 86.5 36 ........A...CT.....A.T............... TAACAAAGGGGGCTTAATCGTTCAAGTTGTATCTGC 1017532 37 86.5 32 ........A...CT.....A.T............... AGGTGATATTATTCACGTCTGTCCTTATTGTT 1017601 37 86.5 36 ........A...CT.....A.T............... ATGAAACGATGATTTTAAAAAAACATTCTTTCTGCT 1017674 37 86.5 36 ........A...CT.....A.T............... TAATAAGTTTTTCGAGATGTTAAAAGATGTATACCA 1017747 37 86.5 35 ........A...CT.....A.T............... GTGTATTTTTGTAAAATTGCTGCCATTCCTGGAGA 1017819 37 86.5 37 ........A...CT.....A.T............... TGATACATTCCGCCTATGTATCAACTATTTTTTTATT 1017893 37 86.5 35 ........A...CT.....A.T............... TGTGGGTATTGATTATATAATTCTAGTTTGAGATT 1017965 37 86.5 36 ........A...CT.....A.T............... TAGAATGATTGTCGGTGTTCGTGTTCGTTTCGCTGT 1018038 37 86.5 34 ........A...CT.....A.T............... TCGTAGTCGGTTATACTGTTAAAATCATCTATAA 1018109 37 86.5 35 ........A...CT.....A.T............... GTAATATGTTGGAAAGTTCCAACATGGATTAAGTT 1018181 37 86.5 35 ........A...CT.....A.T............... AAAGTTACTGAATTAATCTCAGTATGGCCGATAAC 1018253 37 86.5 35 ........A...CT.....A.T............... TTAAAAATCAACCTGAAACACCTTCTTTTAAACCT 1018325 37 86.5 0 ........A...CT.....A.T............... | ========== ====== ====== ====== ===================================== ======================================== ================== 116 37 95.7 36 CTAAAAGAGTAAAATGCAATAGAACAAGCATTGAAAC # Left flank : AGAAATAAATATGACTGAAAAAGATGTCAATAAATTAAGTGAATATTTGGAAGAATTCAGGAAAATATTAACTGGATATTATCCAAAACCAACATCATATAAACAAAGATGTATTGATTGTTGTTATAGAAACATCTGCGTAAAATAATTGTTTCTTGAAAATTATCCTGCGTTTTCCAAACGTATTTCATTTATTTGAAAAATCAAAATAAGATTTAAAACAATATATTTTAAAAATACCTGCAAATTTTAAATATTTTTAACCATGGGAAATAAAAATAACTGTAATGCATACCATATCATAAAATAATATATGAATTTTAGTTTAACCATTATTCCGTGCCATATAATTTTTAAAAAGCAAGAATATACCATAAATAATCCATTGAACTAATTTAACCGGGTATTTATTTTTTGTTGATAAAATGAATAAGAAAAGTAAATATAATGGCAGAATCATAAAAATACTTCGTTATTCTAGAGTTTTTATCACGTCATCT # Right flank : CCGAAGCAAGAGCAAGTTTAATTTCTAAAACTCTTTTATCTTCTTCGATAGTTCATGTTTTAAAAAAACAGGGCAGAGATAACGATTATAAAATATGCAGACAGATTAACAAAGATGTTGGGCAAAAAATAAGAGAATCTACTAATCAATACTGCATAGTAGTTATTAAACAGAGAATTCTACTTGAATTTTTTAATGATCTGCAAGTTTTATATAATCTGATGATATATGGTATATCATACTGATATAATCTATATCACGGTGATACATATGGTTCATGTTCAAGTTGATTTAAGCGATGATTCAAACAGGATTATTGAGATATTCAAGGCTCAACATTCAATTCCTAAAAAATCTATCGCAATAGATATGTTTATTTCACAATTTGCGAGTTATGGTAAAGAAGCTTTAGAATACAACCCTGCATTTGTAAAAGAAACAATAGAACACAGTAAAGGTAAGGAGTTTATAGATATAACGGATAAAAAATCCAGAAGAAA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAAAAGAGTAAAATGCAATAGAACAAGCATTGAAAC # Alternate repeat : CTAAAAGAATAACTTGCAAAATAACAAGCATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //