Array 1 147240-145832 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT706937.1 Mailhella massiliensis strain Marseille-P3199T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 147239 28 100.0 32 ............................ TTCCTCGCTGCCGAGCACCTGCGCCGCCTGCT 147179 28 100.0 32 ............................ ATGACCTTATCGACGCTGCGCTCTTCTTTGAT 147119 28 100.0 32 ............................ GAGGGGAAGGACAAGCGCAGTATGGACGGCTG 147059 28 100.0 32 ............................ TGAAGTGTCCTGCCATGCACGAAATGGAAAAC 146999 28 100.0 32 ............................ TGCTCGACGTTCTGGATGCCCTGCATGGTGTA 146939 28 100.0 32 ............................ GTGAACGTGCCCGTCTGGGTGGACACCACCTT 146879 28 100.0 32 ............................ GCCATGCCGCGCACCACGGGCAACGTGGGAGC 146819 28 100.0 32 ............................ TACTTTTGGCGACAAACACTCGAACGTAGTGA 146759 28 100.0 32 ............................ GACAACGCCAACAAAGAACGGAATGGGCCCCA 146699 28 100.0 32 ............................ TACAGCTTCGCACAGCGTCGCGTGCAGCTTGC 146639 28 100.0 32 ............................ ATCACGACAGACAGGGCCTGCCTTGCACCACC 146579 28 100.0 32 ............................ GTCAGAAGCATCCCTTGTTTGCTAAAGGGGAT 146519 28 100.0 32 ............................ AACTCCATGCGCGATTCCATCATGGCAATGGT 146459 28 100.0 32 ............................ AGTTCCCCCGGCTTCGGCTCCCACTTCGGCGT 146399 28 100.0 32 ............................ AGCTGCTGGAAAACGGCTATAACGTATATGCC 146339 28 100.0 32 ............................ TATGCCATCACGCCCGTGGATATGGGCGGAAA 146279 28 100.0 32 ............................ TTGCCGATGAAGCGCAGACTGGGGCGGCGGGA 146219 28 100.0 32 ............................ CCATTGATAACTTCGAGAGCACGCAGAAGAAC 146159 28 100.0 32 ............................ ACGATCATACCCCGTGCGATGGTTCATCAAGA 146099 28 100.0 32 ............................ GTGGTCGTGTCCACGTCGAGCCTGCCGTAGTC 146039 28 100.0 32 ............................ AGTCCGCACCGCTCATTTCTGCGGCTCCTGCT 145979 28 100.0 32 ............................ CCACACAGAAAACGGATGCAGGTTGCGATCAC 145919 28 100.0 32 ............................ TGCAGGATTGTCACTCCTGCCATGGTGAGAAA 145859 28 85.7 0 .....................A.C..GA | ========== ====== ====== ====== ============================ ================================ ================== 24 28 99.4 32 GTTATCCGCCGCGCAGGCGGTTTAGAAG # Left flank : CGCTGGGCCAGACGCCTGTACGCCGATCTTGCCGGAGGGCACGGTTTTCCCTTTAAAAGAGAGGAAGGAAAAAGAGCATCTTCTTCTCTTGCAGATATCTGCAATGGTTTTCTGGATCATGGCAATTACATAGCCTATGGCTATGCGTCGGTAGTTCTTTGCGGACTGGGGATCAGCTTTGCCATGCCGGTGCTGCACGGCAAGACACGTCGGGGCGCGCTGGTGTTCGATCTGGCCGATATCATCAAGGATGCCCTGGTTATGCCGCTGGCGTTTGAATGCGCTCAGAAGGGGGCTTCTCCGCAGGAGTTCCGTCTGAGTCTTATAGATTTGTGTCAGGAAAAGGAGGTGTTGGACTTTCTTTTTGACTTCATGGAGAAAGCTTGTAAAAAAGTTCAATAATATAAGTATGATATGTGGATACCCTCAATGGGGAAGACTTTTAGGCAAAAAGTGTCGCCGTATGCTGAAATAACAGAATTTTTTAGCAGAAAGCTCTA # Right flank : TCATTCTTCACTGAAGAGCTGGGAGAGATGATCCTTCCTGTCTTCCGGGGAGCGGAAGCGTTCGTAGAGAAACTGGATGACACGGTACGCCGCGTGGGAAATGTACGCCTGTCTGAGCACCAGAATGACGGGCAGGGTGCACAGCTCGCTGAAGTGCACCCTCCGGCATTCCAGAGTGCAGTTCTTCGGGACTTCGCTTTCCGGCAGAATGGCGGCGGCGTTCAGCCCCCGGCTGAGAAGTTCCACCATGATGCGCACATCCTGCGTGTCGGCAAAGACCTGCGGCACGATTCCTTCCTTCTGGAAGGTTTTCATGATCTGGTTGTAGCTGCCGCCGTCGTCTCTGCGGCGGGAAAGAAGCAGCGGCACATCCTTCAGGTCGGCAGGGCGCACGCTTTTTTTGCGGGGAGCGGCAAGGCCGGAGCCGTAAAGCGCGCAGTAGTGTGAGGAACGCAGAGGAATGATCCGGTAGTTCTGATTCTTGAGCGGAAGCTGCGCCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCGCCGCGCAGGCGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTATCCGCCGCGTAGGCGGTTTAGAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //