Array 1 103020-102153 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFCU010000002.1 Enterobacter hormaechei strain 57689CZ NODE_1_length_428337_cov_24.168737, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 103019 28 100.0 32 ............................ TCCTCCAGTGCCGCGCCTTCGATCGCTTCACC 102959 28 100.0 32 ............................ AGCACGAATACAAAAGCAGTAGTCATCAACTT 102899 28 100.0 32 ............................ CTCAGCTGTAATGCGCTCCACGCTGTTGATAC 102839 28 100.0 32 ............................ TCCATCGCTACGGCCTGGTTGATTACCATTTT 102779 28 100.0 32 ............................ GGTGAGCGCAGCAGCATGACGGCGCTGAAGAA 102719 28 100.0 32 ............................ ATTGCACTGAAACTATCCAGCGCACGGAAAAA 102659 28 100.0 32 ............................ GTTATGGATTTCGACGCCAGTAGGGAATGACA 102599 28 96.4 32 ..........A................. TGACTGCCCAGGGTGATTTTGTACCGCCGAAA 102539 28 100.0 32 ............................ AGTCGAATTGTTGCCAGTCGGCTTTATCCATA 102479 28 100.0 32 ............................ TGGAGCCTGAAAGGTGATGCGCCAGCTCCGGC 102419 28 100.0 32 ............................ GACAACATCAACAATCGTCATTGCTGCCATCA 102359 28 100.0 32 ............................ GATGGGGAGCGGCAAAACACAGGCGCTGCTTC 102299 28 100.0 32 ............................ GCTACGGCTGCGGGTATGAATCCGGTTTTATC 102239 28 100.0 32 ............................ TCATCGAGTGTAAGGCTGTGTGATTTTATTGT 102179 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 97.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCTATCAGCCGCATGCCTCTGCTTGCAGGCAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTGAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGACCAAAATGTAATCTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : CCCGAAACAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGTATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGACAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 113964-112496 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFCU010000002.1 Enterobacter hormaechei strain 57689CZ NODE_1_length_428337_cov_24.168737, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 113963 28 100.0 32 ............................ GTGTTAACTCGCGATGGTGGTGGCCATGTTGG 113903 28 100.0 32 ............................ TCCATCTCGATGTAGACAAGGGTTTTCCCGTC 113843 28 100.0 32 ............................ AGAGATTGTTGACGACATCAGGATGATGGGGT 113783 28 100.0 32 ............................ AATCAGCAGCTGATCCATACAAGGGTTCTTTT 113723 28 100.0 32 ............................ CGTAGACACAGCGGCAACAAAGCGATCGTAAA 113663 28 100.0 32 ............................ TGACGACGGCACGACTGTCGCGATGTTTTTAT 113603 28 100.0 32 ............................ TCGCACGGACGGTGATCCGTTGGGCATGAATC 113543 28 100.0 32 ............................ GTCCAGGTCTGCGGTGAGCGCTTTTAGTTGCT 113483 28 100.0 32 ............................ ATTACCATCCGGGCCTTTACCGTTTACTGTTT 113423 28 100.0 32 ............................ GTGCGTCTCGGTCGATGCAAAGTACGTCCCGG 113363 28 100.0 32 ............................ ACAGAGTCAGAGACCAGGCCGCCACCGAACCC 113303 28 100.0 32 ............................ AGCAGGTAGACGACGCGCGCCACAGACTGTGT 113243 28 100.0 32 ............................ CTTCCCGCGTCGGTCACGCAATCGGACATGAC 113183 28 100.0 32 ............................ GCGATATCGACGTAGCTGAAAAAGAGACAAAA 113123 28 100.0 32 ............................ AGTTCAAGGCTGGCATCTTTGAGCAGTATTAC 113063 28 100.0 32 ............................ GTGGAGTTCGCCCGTTTCTGGGTCGAAGACCA 113003 28 100.0 32 ............................ GCATTTTGAGGCCCATCGTTTTGATGGTCTTC 112943 28 100.0 32 ............................ ATCGCATCCTTGACGGGCTTCGCCAGCGCAAG 112883 28 100.0 32 ............................ TTTGAAGCCGGTATAAGTATCTGCACCAAATG 112823 28 100.0 32 ............................ CATAACGACACCTTTTAAAATCGTTAATTAAC 112763 28 100.0 32 ............................ TGATTGAGCATTAACAGGGGCAGACTGTAGAC 112703 28 100.0 32 ............................ CTGACGGGTCCCGATTTTGCGCTGGGCGTGAA 112643 28 100.0 32 ............................ CTGCTCTTCGCGAAGACCAGTTAAAACATAAC 112583 28 100.0 32 ............................ GTAGACCCCGCGATGAATATTCCATACTTAGA 112523 28 78.6 0 ...................T.A..CCCC | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.1 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGTGTGATTTCCGGGTAGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGCGCTGCTGGTGTCGTATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACATATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAAGTTTAGTGTCGTGCGTCGGGGGAGGGGTTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCAAATATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAAATCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTAGAGAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //