Array 1 1537850-1537285 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP064058.1 Mammaliicoccus fleurettii strain ssch2 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
   1537849	    36	 100.0	    30	....................................	TGCCCTGCAAAGATAGCATTTGCTACACCT 	
   1537783	    36	 100.0	    30	....................................	TATTGACTTTTTACAACTTGAGATAGGTTT 	
   1537717	    36	 100.0	    30	....................................	ACGGTGTCATGCAATTAGCAGCTGCATCGG 	
   1537651	    36	 100.0	    30	....................................	GCTTGTCTTGTAGTTCAATGGCACGTCGTT 	
   1537585	    36	 100.0	    30	....................................	AAACGTTGGGATAAAACAGCATTACCTGAA 	
   1537519	    36	 100.0	    30	....................................	AAAAACTCGATTCGATTAGCAATAACTCGT 	
   1537453	    36	 100.0	    31	....................................	CTTTTGCAGGTAACTCACCCTTTACAATCAA	
   1537386	    36	 100.0	    30	....................................	TTACTCATGAGGTTTTCTGTTAAATGGTCT 	
   1537320	    35	  86.1	     0	.........................T.T.G.C.-..	|                              	C [1537295]
==========	======	======	======	====================================	===============================	==================
         9	    36	  98.5	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAATGATAC	                               	       

# Left flank :   TTATATTAGAAATGAAAAGCAATTATTGACAGTAGATTTTATTAATCATTTAGTATGGGATGCGCCACTTAATTTTGAAAAACTTGAGATTAAACGTAGCTTAGAAAAAATTATTAAATTATATCAAGAGGTCATTGAATTAACACCGAAGATTTCAAATTATAATTTAGCTGATATCATTGTCTTCGAACCAATAGATATCTATGTTGTCGTAAAATACCTTAAACATGCAAAACAAGATTTTGTATTGGATATCCATTATGACAATCTACCGATTGCTGTAGCGAAATATATAAAAATGTATGATTTGAAGTTTAATAAATAAATCTAAGAGCTTATTATAGGAAAAGGCTCTAGCGCTTGGTCAATTGACTTGTAAATTAATCGATTTATCAAGCGCTGCTAAATTATTTTAGTCGAAATTGTGCGAGATTTTAAAAATGTCTAACATTAAATTTGGTTATAATAATCATAAAAATAAGCTATAATTATAGCTAGAG
# Right flank :  ATCGGTTGGCGAGACGATAACGCATTAAGCAACGTTATTTTGTTGTTTAATGCGTTTTTTATATTCACTTAGAAATACCTTGGAAATGATTAAGATTCTATTCCTAAAATTCCAGAAATTTCTATAGCCATAAGAAACCCGTTTAATCAGTTTTATTTTATTATTAATGCCCTCAATTGGCCTTCGTATAATAATGCCTTTACGTTTTTATGTACATGTAATCCTAGATTTTGAGTGATTTTTAAATTTTTGACTTTAATTCCAAGCATTTCTGATATATCATTATACATAGGCACAATATCTCCTTAATGGTTTGTTTAGGCACTTACAATTATAGAGATATTTGTGCTTTTTTGATATCAAAAATTAAAATAACGGTCAGTGAATATTTCACCAACCGTTAAAAAATATACAACCTTATTTAATGCACTTGCATATTGGATACACTAAAATTCAGAATTTAATTTTTATGTTCAATATTGTTAATCACTTGTTCATAT

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAATGATAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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