Array 1 404973-405103 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JOEE01000001.1 Phycicoccus jejuensis strain NRRL B-24460 contig1.1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence       	Insertion/Deletion
==========	======	======	======	=============================	======================	==================
    404973	    29	  93.1	    22	....................C......T.	GCCTGTTCGACTCCCGGACCGC	
    405024	    29	 100.0	    22	.............................	GCTGGATGGTCACGTCGACCGC	
    405075	    29	  82.8	     0	.G.C..................G.G...A	|                     	
==========	======	======	======	=============================	======================	==================
         3	    29	  92.0	    22	GATGACCCCGCACGTGCGGGGTTGTCGCT	                      	       

# Left flank :   GCTCTCGCTGGCCATCCAGGACGACCGGACCCGCGGTGACGACGGCGCGCCCCGCGACGCGTTCGCCCGGCGGCTGCGGCGCGAGCTCGTCGGTGAGCACGTCGGCCTGGCCGCCGACGAGGTCCCGGACGACCCGATGGAGGTCTGGGAGCTGATGGGCCGCACGGCCGACGCCCTCGACGCCTGGTACGGCGACGGCGGTCCGTCCCGGGGCCGGGTGCACGTCCCGCGGCCCAAGGCGCCGCTCAAGGGCACCGCGGTCCGCTGGCGCCGGCGGGGCCGGCCCGCGCTGGGGGCCGCGGGTGTACCCCGCCCGCCGGGGCGGCTGCGGCGCATCGGCCCGCCCGAGCTGGGCCGGTGGCAGGAGCTCGTCGCGCCCCGCCTCTACGACCTCTTCGACCCCAACGGGACCCTCGGGCTGACGAACGGCCTCGAGCAGGACTGAGCCGCCGCGGGCTCGGCGGTGCGGTGCCGGCCCCTCCGGACCACACCCGGACCGC
# Right flank :  ACGGCTCGGACCCGGCGACGGAGGGCCGGGCTGACCTGCGAATCCGCCGGCCCCGGGGTCTTCCCATCACCCGGGTCGCGGGGTTACGGTCCTCGTGGTTCGGCGCGGCAGGGGCGCCACGGCCACTCGTCCGACCCTGCCGTCCGCCGTGCGCGGGAGGGAGTCGGGGATGGCGCAGGACGTGCGTTCCGGGGCGGGTCTCGACGTGCTGCTGCTCGCGCCCGCGCTCCTCCTCGCCGCCGTCGCCCGCGAGGTCGCACCACCGGCCCGTGGCGAGGTCCGCGACGACCTCGCGACCGTCGTGGTCCTCCTGCTGTGCATCGCGGCGTGGGTCCTCGCGCGCCGCCTCGACCTGCCGCGCTGGGCGGCCGCCGCGGGTGTCGTCCTCGTGCCGCTCTGCCCGCCCGTCCAGGACGCGGCCGCGACCGGTGACCTGACCGGCCTCACGGCGTGCGTGCTCCTCGTCACCGGGCTCGCGGCCGTCGCCGCCGGGGCGGTGT

# Questionable array : NO	 Score: 2.55
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:-1.5, 6:0.25, 7:-1.20, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATGACCCCGCACGTGCGGGGTTGTCGCT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CCGTTCCCCGCACGCGCGGGGATGTCCCG with 91% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.70,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [18.3-20.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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