Array 1 26221-28264 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIJM01000011.1 Shewanella chilikensis strain JC5 NODE_11_length_97323_cov_1253.34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 26221 29 100.0 32 ............................. CGCTCCAGTGCTAGAATTAAACCAGTAAATAT 26282 29 100.0 32 ............................. CCCGCTTGTGTGGCCTGTACTGGTTCCCAGCC 26343 29 100.0 32 ............................. GAGGCCAATTATGGCTGATATTTTTGCTGCTG 26404 29 100.0 32 ............................. CCGATACGGCCGCGGATAAACACCACGCGATC 26465 29 100.0 32 ............................. GAGAAACAAATGTCCATTTCAATATTGCAGGT 26526 29 100.0 32 ............................. CGAGAGAGTCTGCTGCGGTTTGGTGAAATCAG 26587 29 100.0 32 ............................. TTCGCGGGCTTTTTTGTGCCGCCTAAAATAAA 26648 29 100.0 32 ............................. GCGACAATTCGAGGCAGAGCGCAACGCTTTGA 26709 29 100.0 32 ............................. CACCAGGCCATTGATGACGGCGCCCAGATAGA 26770 29 100.0 32 ............................. GCTCGTGACCTGGTCTCTATCAGCTACATAGT 26831 29 100.0 32 ............................. CCATGGTCGATGAGTTTGGCGACCAAGTGCAG 26892 29 100.0 32 ............................. GCCATGGTTCAGGTCGAAATTGACCGTGTTGC 26953 29 100.0 33 ............................. GCTGAAAACGTAGCTCACCGCAAGGCTGTAAAC 27015 29 100.0 33 ............................. TTCGGTGTGTTGTTTCAGCCCGTACCTATCCGC 27077 29 100.0 32 ............................. GCTCCAGGCTATGGCCGTTTTCAGCTTGAATT 27138 29 100.0 32 ............................. GTCTTCTGCTGTCGGCTTATCAGGCAGACGGA 27199 29 100.0 32 ............................. TATTGCATAGGCAACCCAGTGATTAAGTGGAT 27260 29 100.0 32 ............................. GTGACATCATGGCGGAGCATCGCCGCAACGTG 27321 29 100.0 32 ............................. GGTGCCGGCAAGATGTTCCGGCCGCTTGATAT 27382 29 100.0 32 ............................. GCTTTATCGAACATACCTGCCCCTTATTTTTT 27443 29 100.0 32 ............................. CTGCTGCTATCGAATCAGGTTACGATGCGGGT 27504 29 100.0 32 ............................. CGCAAACAAAGTTGCAACAATGCCAGCTGCAT 27565 29 100.0 32 ............................. CTGAAACAGGATGTAGTAAATCCATATCAACA 27626 29 100.0 32 ............................. GATGTATTTATACAGCAATAGCCGTTGTTAGA 27687 29 100.0 32 ............................. CCGAATTGCTGGCAGTCGCCGCGGCTGAGACC 27748 29 96.6 32 ............................C TTTAGATCTTTTATCTAAATCTAGATGTCCTA 27809 29 100.0 32 ............................. CCTGTTTATTTTTCGGAACATCGAATGAAGAT 27870 29 100.0 32 ............................. CCTCGCGTCATACGCCAATGTGGACGTGACGA 27931 29 100.0 32 ............................. CGTAATTGGGGGTGATAAGTGGCCGGATTAAT 27992 29 100.0 32 ............................. TACCACGAAGATGGCCGCTTCAACGAGCTACC 28053 29 96.6 32 ............................T CCGGGAATAGCGCCCTGCTTGGCATAGGTTGA 28114 29 100.0 32 ............................. ATGCTTGACGATCTTCTGACGCCGTTCGGAGA 28175 29 100.0 32 ............................. TAACGGGTTCATTACAGTTGCTAGCTATAGTC 28236 29 89.7 0 ............T.............GT. | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.5 32 GAGTTCCCCGCACCCACGGGGATAAACCG # Left flank : GGTACTGGCAGCCGGTGAAATTGAGCCGCCTCCAACTCCAAAGGATGCCCAGCCCATTGCTATACCAGAGCCGAAACCGTTGGGAGAACAAGGACACAGGAGCCAGTAACTATGAGTCTGTTGGTTGTGGTGACCGAAAATGTACCGCCTCGCTTACGTGGTCGTTTGGCCATCTGGTTACTGGAGGTGCGTGCCGGGGTTTATGTGGGTGACACCTCCCGCAAGGTGAGGGAAATGATTTGGTATCAAATCAGTGAATTGGCAGAGGAAGGCAATGTGGTGATGGCCTGGGCCACCAATACAGAATCAGGATTTGAATTTCAAACCTTGGGTGAGAATCGTCGTATGCCGGTGGATTTGGATGGTCTGCGACTGGTCTCATTTTATCCAACTGAAAAATAACAAAATATTGCTCTTTAACAACTTGGAATAATAGCCTAAAAAGTTGGTGAATATTTTTAAGTGAAAAATCGCTTAAAAAACAATAGTATTTACCAAGA # Right flank : GTATTTCTTTACTGTACAACCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGTCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGCAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGACAGTTGGAAGCGTCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTAGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACCTCCTGGTGGTGAATTGCCGAGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCACCCACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTACCTACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.10,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //