Array 1 114218-114915 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG753628.1 Streptomyces sp. e14 supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 114218 29 93.1 32 .C..........................C TCCGCGCGGAGATCGATGCCGTCCGGCTTGAG 114279 29 100.0 32 ............................. ACGAGGGCGATCACCGCCAGGCCACCCAGGAC 114340 29 96.6 32 ............................C GCGACCGACCTGCGCGGCAACGCCAACGCGAC 114401 29 100.0 32 ............................. ATGGCGCAGCTGACGATGGCGGCGATGAGGAC 114462 29 100.0 32 ............................. CTGTACGCCTGGGTGAAGGCGGGCATGCCCGC 114523 29 100.0 32 ............................. GGCGTTCAGCGCCGCCGTGAACTCGTCCCGAT 114584 28 96.6 32 ....................-........ AGCGCGTGTTCCTCGCCGTCCCGATGAGCCGT 114644 29 96.6 32 ..............G.............. CGGTTGCGGCGGTGGCGCCAGCGGAGCATCGC 114705 28 96.6 32 ....................-........ GACACCTACAGAGTCAGCGAGAGCGAGATCGC 114765 29 100.0 32 ............................. CGACTGCACGGCCAGGGCAAGAGCCGCAACGA 114826 29 100.0 32 ............................. AGGACTGGCGCATCCAGGTCGATCACCTGGGC 114887 29 89.7 0 ....C...................T..T. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 97.4 32 GTCGACCCCGCGCCCGCGGGGATGCTCCG # Left flank : CTCGACGCGCTGCGCCGCTGGTTCGAGGAGGTGGCCCGCTACGGGAAACTCAAGCACGGCGTATCGGAGGTCATCCACGCGGCGACCAACGGCGGACTCGACGACAAGAACTACCAGCCGTTCCTGGGCGCCATCGCCGCCCTGCTCGACGCCGGCGTCGCGACCGGGGAACTGAAACCGGGCACCGACCCCGAGGACGTGCTGCTCCAGCTCAGCGTCCTGTGGCGGATTCCCCCTGGCGAGGGCGCCGAGGCCCGCGCCGACCGCATCTTGGAACTCATCCTCGACGGCCTGCGCACCCGGCCCCAGACCCCCGGCGCCTGCCCCCGCGCCAGACCTGCAGGATGATCTGCCCACCCCCTCCGGCCGGAGTGGAACGGCAACGAGGACACCCTCTCCGGCCTGAGCCGAAGGGGGTGTCGAGAGGACGAGCCGGGCCGTACGTTGCAGCACTAAATGAAATCACCCACACCGTCGGGTAAAGTCCCAGCTCAACAAGC # Right flank : GCTCCTGGAGGAGGCGGTGTGGATCGCAGATCGAGTCAGTTCCGACCTGGGTCGGGGCTGCGGGTTGCTGGCGTCGCGTATTTCGGGGCCGCGAAGCTCCTCTGGGTGTTAAGAGAGGAGTGTTTTTGCAGGTGAAGGTCTGTTGTCAGTGGTGGCCTCTATGCTCCGGTGCTCAGTTGTGGTTGAGCGAGTGGGGGCGGGGTGGACGTTCGGGAACTGAGCGCTCGGTACGAGCCGTTGGTCGTGCGGGCGTTGGAGACGTTGTGGGGGAAGTCGCGGGAGCGGGCTGGAGGCAGTACCCATCTTCTTCTGGCGCATCTCTTGGACACGGCAGCGGTCGCGGAGTTGCTGTGGGACGGCTTTCTCGCGCGTTCGACGCGGTCGGCGCTTGACACGGTCGCGGGTGGGGCGGGGCGGGGACGGCGGTTGTTCGTCTGGTTGTGCGGGGTGCACGACTGCGGCAAGGCGACGCCGGTGCATCAGCGTCTGTGGCCGGAAGG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCCCGCGCCCGCGGGGATGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCACGCGGGGATGCTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 124888-125586 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG753628.1 Streptomyces sp. e14 supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 124888 29 100.0 32 ............................. CGCCCGGCGCGGTGCGCGCGGGCGCGTGGAAG 124949 29 96.6 32 ............................T CGGGCGTTCCAGTGCGCCGCCCGCTTCGGCGA 125010 29 96.6 32 ...........A................. TGGAGCGCGGAGATCACGATGCTCCACAGGTG 125071 29 100.0 32 ............................. CCCGTAGTCGAGGAGGCACCGTGAAGGTCCGC 125132 29 100.0 32 ............................. TTCTCGTATAGCGCGGCCTCGGCGAGACGGTA 125193 29 96.6 32 ...........A................. CCGGCCCGGCGGTTCCACATCCTCGCGGACGA 125254 29 93.1 32 ...........A...........A..... TCGATCTCCTTGAAATCCTTCCCGACCACCGT 125315 29 100.0 30 ............................. CGTACCGGACGCTGTACCTGGCGGCGGTGC C [125341] 125375 29 100.0 32 ............................. ATCATCGGATGGGCCAAGTCGGTCATCCCGGG 125436 29 100.0 32 ............................. GCGACGAAGGCCGCGGCCGTCTTCCGGAACAT 125497 29 96.6 32 ........................T.... TGCTGCGGCCCCTCGGTGCTGTCGTAGGCCGG 125558 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.3 32 GTCGCCCCCGCGCCCGCGGGGATGCTCCG # Left flank : ACCCCACAAGGCACGGACTTCGACGACTCCGAGTCCAACCACCTGTGGGACGAACACCTCGGCACCGTCCCGGGCGGCACCAACTACGGCCACGCAGACCTGTCGGCTCACGGAATGACCGACAGCCACATCGCGGTCATCGGCCCCGACATCAACGACACCGACCCCACACCATGACCGTCATCATCCTCGTCGCCGCCCCAGAGGGTCTCCGCGGGCACCTCACCCGGTGGATGGTCGAGGCAAGCGCCGGCGTGTTCGTCGGCAACCCCAGCCGCCGCATCCGAGACCGACTCTGGGAACTCCTGGCCACCCGCATCGGCGACGGCCAGGCCATCCTCATCGAACCAGCGGCCAATGAACAGGGGTGGGCCGTCCGCACCGCGGGCCGCGACCGCTGGCAACCGGTCGACTTCGACGGCCTGATCCTCTCGGCCCGCCCCAAAAATCAACCAAACGAAAACAGCCACCCCACCCGATAAAACCCCAGCCCAACAAGC # Right flank : GGTCCGCATCGTCGATACGGGCCCGCAGAGCCCTGAAGTCCTCGTAGGGCTGCTCGCGCGACTCAGCCCCCCGGCGGATGGCTGCTGCCCTGGTCGTCCGGATGTATGAGAAGTCGCGTGAGCTGATCAATAACTCTTCCACGACGCGCGACGTGGCAGGCGATGGCGGCGGTGATGCGATGGCCGTGCTCAGACACGCCCTCTCGCTCACTGGCGAACAGTCCCAGGGAGCCGGAACCCACTCCGATCGGTGCCGGCGAAGAGCCTCCAGGATGGCCGCCCTGGAGGCTTTCGTGTGTCTGGCTCCGGCGGAGGCAGGCAGCCCATCGCGGTCCGTCCGGGGAGGCCGGGAAGGAGCCCGAGTCGTCCACCTGCCCGGCTCCGGCCTTCCCGGGTCGCTCAGGGGGGAGAAACCGACGGGGGTGCCTCTGGTTGCCTCTGAGCGACCCGGGTCGATCCGGGAGCGAATCAGCGCGATCTCCTCTGACTGCCTCCGATCG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCGCGCCCGCGGGGATGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCACGCGGGGATGCTCCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2653865-2654993 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG753626.1 Streptomyces sp. e14 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2653865 29 100.0 33 ............................. GGAGCGCGGTATCCGCTGCTGCGGTGTCGGCGC 2653927 29 100.0 32 ............................. TGGGCGAGCGCGTGCATCCGGTGACAAGGGTC 2653988 29 100.0 32 ............................. GAGCGCGCCGTGATGCGGCTGGAGAAGGAGCG 2654049 29 100.0 32 ............................. GTCTCGCCGTTGAAGGTGAAGATCCCCTCATC 2654110 29 100.0 32 ............................. TTGCCGCGGCCGTCGCGGGCTTGGCTGGGTGG 2654171 29 96.6 32 ............................A CCGAGGAGGAGTTCGCCTCCGTCTACGGCTAT 2654232 29 96.6 32 ............................A GGTCGGAGCCGTCACAGGCGCACGAGTAGAGG 2654293 29 96.6 32 ...A......................... GCGAGGGGCGGGTGCGCTTCTTCTTCGGAGGG 2654354 29 100.0 32 ............................. TGGCCGCAGGCCTGCGTCAGTTCGCGGACCTT 2654415 29 100.0 32 ............................. AGCGACTCGTCGTAGTCCACACCGTGGAGCAG 2654476 29 100.0 32 ............................. CAGATCGTCTGCTCCGGAGCCTTGAGGACGTC 2654537 29 100.0 32 ............................. CAGCTGCGCGCTGCGCACCGTCCGCGGCCCTC 2654598 29 100.0 32 ............................. GCGTTCTGGTACTCGACGCCCGGGTTCGACGT 2654659 29 100.0 32 ............................. GCGCACTCGCCGCTCAGGGAGCAGCACGATGA 2654720 29 100.0 32 ............................. CACAGCTGGGCCCCTGCCCCTGTGGCTTTGTC 2654781 29 100.0 32 ............................. GACCACGGCGACCCGCTGTCGTGGCCCGCATT 2654842 29 93.1 33 .............GC.............. ACACCAACCCAACCGACAAGGAGACCCCGATGA 2654904 29 100.0 32 ............................. TGCGGCGCGCAGGAGCCGGCGGCGGACGAGGA 2654965 29 82.8 0 ...A.................C..C..TT | ========== ====== ====== ====== ============================= ================================= ================== 19 29 98.2 32 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : ACGTGCCGGGCGAGCTGGCGGTGGCCGGGTTCGACGACATCAAGGAGGCGGCACTGGCGGACCCACCGCTGACGACGGTCGCCTCCGACCGCTCCGCGATGGCCCGCTCGGCGGTGGACCTGGTCCTGGACGACGGCCTACGCATCGCGGGCTCGCGGCGCGAGCGGCTGAAGGTGTTTCCGTCGCGGCTGGTGGTGCGGAGGTCTTGCGGGTGCGCTTGATCCGCCGGGCGGGGGGGGGCGTGTGGGGGTGCGTGTTGCCGCTGAGGCGGGGGGTGTGCGGGGGCGCGTGTTGCCGCTGGGGCGGGGGCGTGGGGGTGCGTGTGCGGGTGCGTGTAGGGGTTGTTTCGGGCGCGGTTAGGTAGTTCTTCTGGGATGGGCGGAACGGTTTCGGGTGGTGGGTGCGCCGAGGTGACGGAAGGCGGCGCGGATATGGGGCGGCGTATTGGTAAAGCGGGTAAAATCGACCTCTCCGCATAACATAACCGCAGGTCACTCCCT # Right flank : TCGGGCCGTCCCGTAGGGGGCGCTGGGGGGCTTTATATCGGGCATACGCGGTTCTGTCGGGCTTCTCAGGGGGGCCTCAGGAAGCTCTCATGATCCCGGGGCACTCTCAATGACATGACCGAGAGCATCCGCCGCAGCGGCGAGTACGAGTACCCCCAGGGTGACGGGCAGGACCCGTTCGCGTACCGGCAGCAGCACGCCTCCACCCCCGTGGACCCGGAGTGGCCGCCCCCGCCGGCGTACCCTCCGGCGCAGCCCCCGGCCACCGCGCCGACGGCCGCGTACGGCCACGGTGGTCACGGCGGTCACGGCCACGGTGGTCACGGCGGCGGCGGTTACGACGGTGGCGGTTTCGATGGCGGCACCGCTGTTCTGCCGGGCGCACCGGTCGGCGGCACCGCTCCCGCTGCGCGGAAGCGTGCCAAGGGGCCGCTCGCGCTGCTCGCCGCCGTGGCGATCGCGGCGGCGGCCGTCGGCGGCGGCACCGCGTTCGCCTTCCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //