Array 1 19981-21199 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFU01000022.1 Butyricicoccus sp. AF24-19AC AF24-19AC.Scaf22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 19981 32 96.9 34 ................T............... TCGTTGTGGCTGGTAAGGTGCTGCTAGATATTAG 20047 32 100.0 34 ................................ AGGGGTTGTGCATAATTTTTGGGTTGTGAGAGGG 20113 32 100.0 35 ................................ AGGTTTTTCGCATCGAGCGAGCCGTCGTAGAAACG 20180 32 96.9 32 ..........T..................... GAGATACCGCGCCTTAACAAGCGCATCCTGAA 20244 32 96.9 35 ..........T..................... ATGAGCGTGATAACCTGATACTGGATGATTTGAAC 20311 32 100.0 31 ................................ TCAGCGTCTTGCGTCTTGATTCCGTCATATC 20374 32 96.9 35 ....T........................... TACCGTACCAGTCATCCTTAGTACCCGGTACGCCA 20441 32 96.9 34 ....T........................... CAGCGAAAATCGAAATTGCGTTGTCGACGTTGAT 20507 32 100.0 33 ................................ ATCTGAGAGGCCGCCACGGCCGTCATAGCGGTC 20572 32 100.0 33 ................................ GTCGAAGATGCAGCCACGGCCGTCATAGCGGTC 20637 32 93.8 34 ..........G.T................... GGGTCACGCAGGTCCAGCATCCAAGAAACGAAGG 20703 32 96.9 36 ...................C............ GACAAGACCTAATAGCTGATATTTCGGCCAATACAG 20771 32 100.0 34 ................................ TTCATTACGACCATTGATATATTCCGCTAAAGCT 20837 32 100.0 34 ................................ TCGTCATCGACGCGATACAGATTGATGTTCTTCG 20903 32 100.0 33 ................................ ACGTAATACGAAATTGCAACGCCGCACATCATA 20968 32 96.9 35 ...................C............ CCCTGTCTGCTCTCGCGCACATACTGGCTGATGGT 21035 32 100.0 35 ................................ CGGTTGTACACCAGCTTGGGCATCGCGTTGTTGCG 21102 32 96.9 34 ............C................... GCCTTACCATCAATAACTTCGACATTTAAACTAT 21168 31 87.5 0 .................-.........AA..G | C [21188] ========== ====== ====== ====== ================================ ==================================== ================== 19 32 97.7 34 GAAACATTTCATACCCCTATGGGGACAGCAAC # Left flank : GTGCCGAGCACATACGACCCGGGCTTTACGCCGGTTTCCTCCGAGAAGGACTTCATTTCCTGGGGTGCGAACAACGCTTTCTACGAAGGAAATATCGTAGACGGCATGGAAGCCGGTAAGGATTTCCGCAAGGTAAAGAGCGGGTTCAGCACCGACACCAGCGGCGAGGTCAAGAGCTTTTTTGTCGAGGTGGAGTATCTGGACGCGCAGTCGTAAGACAAACAGGCGATAACCCAATAGGGGTGGTTGAACGAAGAACCGAGGGCTGTTCCGGCGTATGCAATAGGAATGGCCCTTGGGTTCTTTGGTTGCGTTGGTGCAAGCCGCGTGATATAATATTATTCAAGAGATGGTTTGGGGCAGGTTTACACCGCAATAAACGGCTAATTTGACCGGTAATAGCGCTGTAATATCAAATTTTTGCAGTGATTATTATAACAAGTTACAGAAAAAACAGCCGAATAACTGAATTACTTCATTATTTTTTGTGCTGTTTTGCT # Right flank : GAAAACCGATATGTCCAATTGGACATATCGGTTTTTACTTTATCCGCTATTGTTATTCACATATTACGCCGCCCATACCGAGCGCCGTTTTAATGCCGACACCCGCATACGGTGCAAAGTGCAGCAGCAGGTTCGCCATCGTAAGATGAAACCCATCCAGACGGCATTTAAGCGTCAGTTCTCCGGTGAAGCCGGGAATGGACTGTCCTTTGAGCAGATAATCACGGCTCGACAGCCGGTACTCGGCAATGCGAAGTCCGTTTGCGATCGCCTGAATGCCTTCGCCGTCCTCATCCTCGATCGGACAGACCTCTGCAAAACAGCCGTTCCACTTGTTCAGCAGATTTCGCATAATAAGCGGCACGGACGGCAGATTGACATAGCTGCCATCGCTTTTGAACGCGGTCGGCGTGAGAAACCGCAGCTTCATTGTGCGGTGCTCGGGCAGCTGCAGCAGCGTGTCCGCCGAATCAATATGCTCAATCTGCATCGTGTTGACA # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACATTTCATACCCCTATGGGGACAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 35182-34209 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFU01000022.1 Butyricicoccus sp. AF24-19AC AF24-19AC.Scaf22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 35181 33 93.9 33 ......CT......................... TGCTTACATTATACAATTTTCAAGGTACAATAA 35115 32 90.9 36 ......CT................-........ CTTTGTGGCTCACTAGTATAATATATACTCGATTTC 35047 33 100.0 34 ................................. ACGGGTTTGTGAGAATATACATTCACTGGTGATG 34980 33 93.9 33 ......CT......................... GTCGAGCCGCCGGTGTAGTAACTGCCTGTTACC 34914 33 97.0 34 ......T.......................... GATATGCTGCATAAAGCCGTAGCGCTTGATGGAT 34847 33 100.0 35 ................................. CGAATCAAGTGTAGAAATTCTAGATGCCATAGACA 34779 33 97.0 33 ...................T............. CATGTAATGGCACGCCCACAGCTTAGACCCCTG 34713 33 100.0 35 ................................. TTCTTGCAAACCAAATCTTCATATCGGATATCGCC 34645 33 93.9 32 ......G...........A.............. TCCTCCAGCGGATCCAGGTCACTGTCCTTACG 34580 33 100.0 32 ................................. GATATCATCAATGGCGAATTTGAAATCTTTTG 34515 33 97.0 35 ....T............................ CCGACACCCTTGATAATTGCTCTGTTTCCCATGAT 34447 33 93.9 34 ......G...........A.............. AGGTGGGAGCTTCTTACGCTCTTGGATCTCATAG 34380 33 97.0 38 ......G.......................... CCGAAGCTCGGGCGACGCGTTCCTTAGGGATACCGAAA 34309 33 97.0 35 ......G.......................... AATAACTCTCTGCGCGAATAACATTGCCATCATTA 34241 33 97.0 0 ................................A | ========== ====== ====== ====== ================================= ====================================== ================== 15 33 96.6 34 GTAACAACTCGCGCCCCTGCGGGGGACAGCAAC # Left flank : ACTGAGTCGTTGGACAGGATGCCGAGGTTCAACACGTTGATGGTGATGCCCTCGTCGATCATCTCGGTGATGAGGCCGGACGCCTGCGACACCGACCGCGCGAGGCGGTCGAGCTTTGTCACGATGAGCATATCGCCGCGCCGCAGCTGCGCCCGCAGCCTGTCGAACTCCGGGCGCTCGATCTTCGTGCCGGTGAAGGTGTCCGTATAGATTTTTTCCGCGCCCGCCGCCGTCAGCGCCGCCTGCTGCGCGTCCAGACTGTTGCCGTCGCGCGCCTGCGTCTTGGTCGAGACTCTCGCGTAGCCGAATGTCATGTAAATTCCCCCGTTTTCTCGGTTTTGACACCGCGAGTTTTGAATATAGGTTTTGATACCTACATTATAACTTATGACGCTGAGTTTTGCAACCGGTGGCAATACTTTAAGGTTTTGAGACCGGGCGGCGGAGGATGTGCAGCAGCGGTTGATTTGGTGCGAACCTCGTGTTATAATAACAATAAA # Right flank : AAACCGATCTGTCAATTTTGACAGGTCGGTTTTATTTTTTTGCCCGAACTGTGAAAAACCCCGTCCCTCCAACCGATAACATTGTGTAAGGCAAAGAACCTTCTCAAAAAATTTTTCGGGAAGTGTGAAAAACGCCGAAAAATTTCTGATACCTATACAGAAGAACTTAGAAAGGACAGGAGGTGAACCGTATGTTTGTAATCCGTGAGCCGTGGCTGGATTTTCCGCTGTTCGGCGAGGACAATCCGCTCCTCGACTGGGTGAAAGACACCATCTGCTACTAAGCAGACCTAAATCCACAGCAGGGGAGGTGAAAAATTGAAAACCGTGTTATGGATATCGCGCCACGCCATGACCGAACCACAGCTGCACGACCTTGCGCGCGTGCTGGGCGATACGGTGCAGGTGCTGCCGTACACCCAAACCGTAAAGCAGGCGGACGTACTGCGCCCGCTGATCGAGCAGGCGGATGCAATCGCCGCCGTACTGCCGGTGGAGCT # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACTCGCGCCCCTGCGGGGGACAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.40,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 1 72991-69373 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFU01000008.1 Butyricicoccus sp. AF24-19AC AF24-19AC.Scaf8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 72990 32 100.0 34 ................................ TTGCTTGATTTACGGATTGCTGTGCAGGACTTTG 72924 32 100.0 35 ................................ AACATTGCACGCCCGGAGCTGTCCGGCGACCGCCT 72857 32 100.0 36 ................................ TGCAAGGCGACGATCAGGGCAAGCTGGCGCTGACGA 72789 32 100.0 34 ................................ TTCGGCGGCGTCGCGATAGGAGGAATCGTAAACG 72723 32 100.0 36 ................................ GTCACCCTCATGCAGGCTTTGGAGCATATCGGCGTG 72655 32 100.0 38 ................................ CGCATAACTTGTTGCAAACGCACCACGCGGTATTTCTA 72585 32 100.0 33 ................................ GAAGAACCGGTGTACATGATTTATCGCTGGTAC 72520 32 100.0 34 ................................ ACCTCCGTCCATCTTCGCCCCGCAGTTGGGGCAG 72454 32 100.0 36 ................................ GTAGAATTCCATGTGCTCACCTCCTATGAGTACAGC 72386 32 100.0 34 ................................ TTGAACCCGTACCGCCTGCCGTACTCCATCACTG 72320 32 100.0 34 ................................ GGCGCCGGTCTGTGGGGTGTAACTCCGGAAGAGG 72254 32 100.0 35 ................................ TCATTGTAGCGTAAATGTTATTGCTCCGTCACCCT 72187 32 100.0 35 ................................ TTGTATATCGACCAGACAACCACTTAGCAGATAAA 72120 32 100.0 33 ................................ GATAGCTTTTGCGCGGACTGCGAGAATTTCCTC 72055 32 100.0 34 ................................ GCTCAAACGCACATCTTCCCATTTGGCTTTGCGA 71989 32 100.0 35 ................................ GGCAGTAGGTCAGAAGTTTTTGCCGAAGGAAAAGC 71922 32 100.0 34 ................................ ACCGAGCGCCGTCCGTACCTGCTGCACAGACAAT 71856 32 100.0 34 ................................ AACTATGCCGACGGAGGTTATCTGCACCATTATC 71790 32 100.0 34 ................................ ACGCCTGCCATAATCAAGCACCACTCACCCACCG 71724 32 100.0 34 ................................ AACCTCAACCCGCGGGTGTTTGGAATCCACCTCA 71658 32 100.0 34 ................................ GTGCGCAGACGGCACAGGGTGAGCGGGTTGCACT 71592 32 100.0 34 ................................ CATTTACTCAGCCAGCCGATTACCGTACTCTCCG 71526 32 100.0 34 ................................ AGTATAAGGTCTGCCGGGCGTGAAAACCTGTCAC 71460 32 100.0 35 ................................ ATGTCTTCCATGTTGTATGGACTTGCAATCATGCA 71393 32 96.9 35 ......................A......... TGCGACGAACGCACCACTCAGTCGCTTCGTAGAAG 71326 32 100.0 35 ................................ TCAAGAACTCCATGGACTGGCACAGGACCAACGAT 71259 32 100.0 34 ................................ GCTGCACAATAGCGCTTGGCGTAATACTTGCGTA 71193 32 100.0 32 ................................ TTTGCAATCTCAAGGTACAGGTACTGGTACCG 71129 32 100.0 34 ................................ TACGCCATTCTGGGTGATACGGACACCGCAACCG 71063 32 100.0 34 ................................ GGTAGACCAGACCGCACCGCTTGCGGGCAACCGT 70997 32 100.0 37 ................................ CGCATTACGCGCGTGGAGCATCACTACGGCGGTGCAG 70928 32 100.0 33 ................................ TACCATAATTTTTGGGGGGTAAAGGGCATTTTT 70863 32 100.0 35 ................................ GCCAGCGAGTGCGCCGCGTGAGTGGCGCGCCGCGG 70796 32 100.0 35 ................................ TGCCAGCATTGTAACCGCCGTTGCAGATGTTCTTG 70729 32 96.9 35 .............T.................. TGCGCTGTACTTGGCTACCTCCAAGATTGCCGAGC 70662 32 100.0 35 ................................ TACCGCTATGGCGGCTATTGTCGCTGCACCGGTAG 70595 32 100.0 34 ................................ TACCGCGCTTACTGCACTGTGTAATAGCCCGTTG 70529 32 100.0 33 ................................ CGCGAAGCGTTTGAAGGTGTGCCGCAGGTGACC 70464 32 100.0 33 ................................ GAGCAGAATACAAATTCCTTGTAATAAGTGCCG 70399 32 100.0 35 ................................ ATTTTGTTTGCTGGTGTGCGTACAAGTCCGGTGCG 70332 32 100.0 33 ................................ CATGTCGCGCTGCAGGAGGCGGACACGGACGGC 70267 32 100.0 34 ................................ CCTTGCGGGCAATGCGCCGGTGATGGCGGCAAGT 70201 32 100.0 33 ................................ TGAAAATTAAAATTTATGGGTGCGGGCTTTAAG 70136 32 100.0 34 ................................ TCAGCAGTGCACCAAGGGCGACGATGTGTTTGAG 70070 32 100.0 36 ................................ GTAATTCTACGGGTGGATTGAGTGGTATAGCTGATT 70002 32 100.0 35 ................................ ACCGCCCACAGCAAAGGAATGTGATGAAGCTGCTC 69935 32 100.0 34 ................................ ATCAAACAGATCCTTGGCAAGTCTAAGGGCAACT 69869 32 100.0 33 ................................ TCTACCGCAGGCCCGGTCAAGGCCGGTGATGTC 69804 32 96.9 34 ............G................... ATGACCGTACTGCGTGAGCGGCTGAAAAACGGCG 69738 32 96.9 34 ............G................... TTTGTCGCGGAGGCGCGGAAGGTCTGGAGGATGA 69672 32 96.9 37 ............G................... CGTACAAGGCATTTGAATGTCGCGCTACGATGTCCGG 69603 32 96.9 34 ............G................... ATGAATTCTTGAAAATCGACTTTTGCGCGACCGT 69537 32 96.9 34 ............G................... ACCGTGGAAACCGTGACCGCCGAGGAGGAAACCG 69471 32 96.9 35 ............G................... TTGATGAGCAGACCGGGTTTCTTGGTGTTCTCGAT 69404 32 93.8 0 ............G....G.............. | ========== ====== ====== ====== ================================ ====================================== ================== 55 32 99.4 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : TTTGTGGAAATGAGGTGTCGAATATGCTGGTTGTGATTACTTACGATGTCAACACCGAAACAGCCGCCGGGCGCAAACGCCTGCGGCAGATTGCCAGGCAGTGCGTCAATTATGGACAGCGTGTGCAGAATTCCGTGTTTGAATGCCTGATTGACGCGGCTCAGTGCCGTATGCTGCAACAGAAGCTGTGCACCATTATGGATGATGAACTGGACAGTCTGCGATTTTACTATCTCGGCAACAAATATGAAAATAAGATTGAGCATTTTGGTGCGAAACGCGGCTATGAGCCGGAAGGCGTGCTTATGGTGTAAGGCGGTGCGAAGTGCAAGCAAACCGAAAAGTGTCGGCGCTTCGCACCGTAATTTCCGATAGATTATATACAATAGTTTTATCGAATGTCAAATTTGCAATTGTGTTTTGCACGAATCTATGCAAAACTGTTATTGTAATTGTTTATTTTGTAAAAATCATTGGGGATAGTCTTGGTGATTTTTGCT # Right flank : GGCGGTGGTGTTCGGGGCTTCCTGCTCTCTGATGTCGCTCCCTTCACGGGATCGACACAGATAGCCGCACCACCATCCTCCCGTCCAACATCGCCCGATCTCTATCCCTCACAATCTTTCACCCGCCCGACCAAAACATTTGCACATGTCATGACACATGTGCTATAATAACTCCAATACCGCTATTGACAGCGCCGCACAGATTGTTGCGGCGTTTTGCCGGGAAGGAGAAAAATCAAATGAAAGCATACTTTGACAGCATCGAAAAGGAGGTTCCGAAGCAATTACAGCAGGTTTTCCTTAATCGCCGCGATACGGCTGTCATTACGATTGACATGCACGATGGACACCTGTCAACCGACCCGGACTGTCCATGTCCGTCTCCGCGAGGACGCGAGATCATCGAACCGCTCAATCATTTCATGAACGAAGCACGCGCGCTCGGTCTGCCGATCATCCATGTCCGCTCAACGCTGCGTAAGGGCGGCGCAGACGAAAAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //