Array 1 2541918-2543002 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017603.1 Clostridium formicaceticum strain ATCC 27076 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2541918 30 100.0 35 .............................. GAAGAACAAAACCTTTTCTTTCTAGTTCTTCCCAT 2541983 30 100.0 35 .............................. TAATAAAAAATCTCCAATATAGAAAAATCCAATAT 2542048 30 100.0 36 .............................. GATGGCACACGCCACTGACGAAATTAAGGATATGTA 2542114 30 100.0 36 .............................. TGATTTAGCCACCTGTATAAAGTGCTTAAAGGAATA 2542180 30 100.0 36 .............................. TATAATCTTCTAGCATTTCTAAGATTTCATCAAAAT 2542246 30 100.0 37 .............................. ATATAGGATTGACTAGCTACAATTACAAGGAAGCAGG 2542313 30 100.0 38 .............................. AACTAAAAGAAAATTTTATTACTATTCCCACGATCAAA 2542381 30 100.0 36 .............................. TAATCAAGTTGCAGCATAACAGATCCACAGCTGCTG 2542447 30 100.0 35 .............................. AGAGGAATTGGGGAAAAAAGTTGGTGTATCTAGGC 2542512 30 100.0 36 .............................. CCATATTTTTTTCTGTAAAAAAACATTTCTGAATCA 2542578 30 100.0 36 .............................. TGCAATTTTTTCATTTTAAAACTCCTCCTTTTCATA 2542644 30 100.0 36 .............................. TGCAATTTTTTCATTTTAAAACTCCTCCTTTTCATA 2542710 30 100.0 36 .............................. ATACTTTTGGTACAATTTTATACCAAATTACATTAC 2542776 30 100.0 36 .............................. CAATTTTAATGATTATGTTAATGTTAACTTTAACTT 2542842 30 100.0 36 .............................. CAGTTTCTTCACGAAGAAGGCTTTAAGCATCATGCA 2542908 30 93.3 34 ...A............A............. ATCCTTGTTTTTCTAGAACTTCTAATGAAATTTG 2542972 30 90.0 0 ................A.........TT.. | A [2542997] ========== ====== ====== ====== ============================== ====================================== ================== 17 30 99.0 36 ATTGAACCTCAACATAGGATGTATTTAAAT # Left flank : TGTAAATGAAAAAAAATTATAATTACAATTATGCTTTTCTTTTTTATGATGTCAATGTTAAGCGAGTCAATAAAGTATTTAAAGTATGTAAAAAATATTTATCTCACTTTCAAAAATCTGTTTTCAGAGGGGATATAACACCATCGAAGTTGATGTTATTGAAAGAGGAACTGAATAGAGTAATAGATGAATCTGAGGATTTTGTATGTATCATAAAGTTGATGAATAACAATGTATATGGAGAAGAAATATTAGGCAACAAGCAAAATGATACAGGGGAAGATCTCATATTATAAGAAATTTCAAAAAAATGGTATTTGTACTTTTACCAGGCAACATTTTTATTTCATAGCATTTAATTCACTGTTTTAAATCGTTATAGATGTATTTGTATAAAATTCATATTCTTAATAAATTGACTTGGTAAAAAATTTATTATACTATTGATTTAGCTTGATTATGACGAAAAATCAAAAGATTGGAATGAGTTGCTTGCAATG # Right flank : TGATAATAGAAATTTTACATTCTTTTTAGTATTAGTTGAAAGGCATAATTTTCCTCACTATGTAAAACACGAATAGTGGATTTTAGGGTTTTAAATTAATTTTATAATCTGATACAATAGAAAAGTATATAATATAATTATCGGAAATAAGCAAATAAAAAGATGCTTCAAGAGGTGAAGACAAATGAACGAAAAAAGCTTAAGAGTATTAGAATATACAAAAATCATTGAAAAATTGGTTGAGGGGTGTACATCCTCATTGGGTAAGGATTTAGTAAAAAACTTAAAACCCTTCAATCAACTTGAAAAAATACAACAACTACAGAAGGAGACCAGCGAGGCTCAAAGTATATTGATAAAAAGAGGAAATGTTCCACTTGGGGGTATCCATGATATTCTTCATCTTGTTCGTAGAACAGAGATTGGTTCTTATCTGGACCCAGGGCAGCTTTTATATCTAAGAGATACATTAGCTGTTGCTCGAAAACTAAAGCAATTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTCAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 3726744-3724927 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017603.1 Clostridium formicaceticum strain ATCC 27076 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3726743 30 100.0 36 .............................. CCTTTTTAAAAGGCATAAAAAAACACCCTTCTAAAA 3726677 30 100.0 37 .............................. TTTTAAAACCCTGCTGTCTAAAATACTGTATTGTCTT 3726610 30 100.0 38 .............................. AACAATAGCAACACCCAAAATATCAAACGAAAAAGTTG 3726542 30 100.0 37 .............................. CCTTATATTATTGTAGAGGGTTCAGTTCACAAAGCTA 3726475 30 100.0 36 .............................. TTATTAGACAGATATTCAAAAGGGGGATGAATATGG 3726409 30 100.0 36 .............................. CATAAGGCTTCACACAAAGCCCCTGATGTTGCCCTA 3726343 30 100.0 37 .............................. TTAATAGAAGCAGCTGGAACACTTAACGTAACAGAAG 3726276 30 100.0 35 .............................. TCTTAATAATCTCCGTTGCGGTTTCTACTGGCACA 3726211 30 100.0 36 .............................. ACAATTGTTTGTAGATTTTGAAGATGCTCATGCGGC 3726145 30 100.0 37 .............................. AACCCAAAAACAGTGAAACAAATACTTGATTGGCTTC 3726078 30 100.0 35 .............................. ACAGGAAAAGAATAATCTTCTTTTGCAAGATCTGC 3726013 30 100.0 35 .............................. TTTGGATCATCTCTACCACCCTTTCGGACTATAGT 3725948 30 100.0 37 .............................. ATTGTTACATATTGCAGGCAAAGCCTGCAAAAATACA 3725881 30 100.0 36 .............................. TTAAACATGATTATAGTTCACTTGCGTTTGAAAATT 3725815 30 100.0 37 .............................. TTGGTTAAAGAAATAAAAAAAGAGTGCAAAAGGTAAA 3725748 30 100.0 37 .............................. GCTTGTATATTGGTCTTTGCGTTAATAGCTGCTAATC 3725681 30 100.0 36 .............................. TGATAAAAAAGCAGAGTGTTTTACAAGGGGTATAGC 3725615 30 100.0 37 .............................. AGAACTATTAACATTGTGAAACCTGAAGTGATTTTAA 3725548 30 100.0 38 .............................. AGAACAGATTCAAGATACCTTTCAGAAGATATGATCTC 3725480 30 100.0 35 .............................. TCAGGAAATTCTTCCCTATATTGATAATCTGTATC 3725415 30 100.0 35 .............................. ACTTGTCCCTCGATACAATAAAATAAGGGAGGAAT 3725350 30 100.0 36 .............................. AAGGTAGCCAAAATTATAGCAGCATATCTAAAGTTA 3725284 30 100.0 37 .............................. AGATGGAAGGTGCTTATTGTGCTGAGACAGCATATTT 3725217 30 100.0 35 .............................. GTATCACGAACATAAATATTATAACCTTCTATCAT 3725152 30 100.0 35 .............................. AGATGTATTATAAGCAGTGCTACTTCATCTATCGC 3725087 30 96.7 35 ..G........................... CCAATAAGTAAATCTATTTCAGTTTTGACATATCC 3725022 30 100.0 36 .............................. ATGAGAAAAAAGAAGCAGTAAGGACCATAAGGCGGG 3724956 30 96.7 0 ..G........................... | ========== ====== ====== ====== ============================== ====================================== ================== 28 30 99.8 36 CCTTTAATAGAACTACAGTAGAATGTAAAT # Left flank : AGAAATATAGTGGATTTAAAATTTGGTGGTGATGCTATGTATGTAGTTTTAATGTATGATATAATGATGGATAAAGATGGTGCTAAAGTGCAGAGAAATACCTTTAAAATATGCAAGAGATATTTAACCCATATACAAAAATCTGTATTTGAGGGGAATTTAACAGAATTAAATTTAATGAAGTTAAAAAAAGAATTAGGTCAGTATATAAGGGATCATAAAGATTCTCTGGTAATATTTAAGAGTAGGGATGAAAAATGGCTAGCTAAGGAGTTCTTAGGGTTAAAAGATGATAAGACATCTAATTTTTTTTAGATAACAATCTGTCGATCTCTAGTAATGTAAAAACAGACGGTATCGACAAAGTCAATTTATATCTTATGTAAAAAGTATTTTTTAGAAAAAAGATGTACTCAATATAACTTTAAATGACTTTTAAACCACACTTGGACAGAAAGTAAGTGTACAAGCCAGTAGTATAAATGCTTTAAAATGAGCGA # Right flank : AAAAAAGTAGAAAAAGAGAAATACACAGGGCAAGATCCTTTAACAAATAGAAATACAACCGTAGAAAAATAAAAACAAACATACTAAAGATAGCACAGTAAAGTATAGGAAAAATGTGTTGAAGACAATAATTAGCGTAATTATAGGATATATATTTTAAAATATAAACTACATTTGCATCTAGGCTTAAGTATAGGGTACAATTGAAGGGTTAAGAATTATCTAAGAAAAGATGAAAATAGAATGAGACTTAATTCAGGGGGAGTTTTTACTCTTACTGAATTGTAGTCGAATTTATTTCGGGGATGTAGTGTTTGACCTCCCACTTAGATAAGTAGATAACCCAAATCTTTGATCTGGTGTTAGTCACTTAGTTTGTTCACCTAGAAGTGGGAGTCTTAGCAATACAGCGAAGAATAAATTAAGAGAAGATAAGAAATAAAAACTCATCTAAAGATGAGGAGGCGTAAATGATGAACAAAACTGCTATTAAAAGCTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTAATAGAACTACAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //