Array 1 80382-77619 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUHA01000001.1 Bacteroides sp. AF16-49 AF16-49.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ================================ ================== 80381 47 70.2 30 .C.A.AG........TGG..G.A...T....GGA...........G. GAACTACTTCGTGAACTTATTGACGAATGT 80304 47 93.6 32 .....A...........................TT............ GCCTCGCCCCATGCGCGGAATGGCGAAGATTA 80225 47 95.7 30 .........C...................................G. AACATCCGAAGCGAAGAAATTGAGCGACTT 80148 47 97.9 30 ..........A.................................... TTTAATGCAAGCCCTAGTGTTATCTATTGG 80071 47 100.0 30 ............................................... TGTCGCCGAAGTCCGTCCAGGCGTCGCTAC 79994 47 100.0 30 ............................................... TTAATTGATATCAATCAGTTAGACAGGTCT 79917 47 100.0 29 ............................................... AATTATCAGGATACACCGTTTGACGGTAC 79841 47 100.0 29 ............................................... ACATTTCGGTGAACCACGCTTCAATTTGT 79765 47 100.0 30 ............................................... AAGGTCTTATTGCCACACGGCAACGTGTTA 79688 47 100.0 30 ............................................... GCACCTACTGTACAGATCACATCTTGGGAA 79608 47 83.0 2 .......................................ATTTGTTG AA T [79564] Deletion [79560] 79578 47 91.5 30 CCAT........................................... GCACCTACTGTACAGATCACATCTTGGGAA 79501 47 83.0 25 .......................................NNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNN 79429 47 91.5 30 NNNN........................................... GCACCTACTGTACAGATCACATCTTGGGAA 79352 47 100.0 30 ............................................... TTTTTCTAAATTCTCCCTTATCTTATACAA 79275 47 100.0 29 ............................................... GATATTGAATTAATGCAACTAACCGATCA 79199 47 100.0 29 ............................................... ACTATGAATGGTATTAATAATGCTATTGT 79123 47 100.0 31 ............................................... TTCTTGAGTACCACGATAGATGGGCTGCCGA 79045 47 100.0 29 ............................................... CCTTCCATAAGGCGATGGTTCTGCAAGGT 78969 47 100.0 30 ............................................... CAAAGGCGGTCGATTATCTGTAATTGCTTA 78892 47 100.0 30 ............................................... CTTTATCCAGAAACTAACACAGGCTGGGGA 78815 47 100.0 30 ............................................... TATGTGTGTTGAATGATTGTTTGTGTATTT 78738 47 100.0 30 ............................................... CTTACGAACAATTTGGAACTGCAACTATGG 78661 47 100.0 30 ............................................... CAAACATCTCACAATGATGGAAAGACGATA 78584 47 100.0 30 ............................................... ACTAATTAAAAAATACGATTATGGAAAAGA 78507 47 100.0 30 ............................................... TCTTTGCATGATTTTATGAGGTTAGAGGTA 78430 47 100.0 30 ............................................... ATTAGGTGCTACGTTTCCTTCAATAGAGAA 78353 47 100.0 30 ............................................... AATATGTTTCTAATTTCAATTTGCAATCTT 78276 47 100.0 29 ............................................... CTTTATAATTGATAGACCAAACTATCGCA 78200 47 100.0 29 ............................................... AAATGTCTCAGGCAAACGGTTTATTCTAT 78124 47 100.0 30 ............................................... TTATTGAATGCGAATACAGTGATAACATTC 78047 47 100.0 29 ............................................... TTTTGTATTAATTGAAGGTAGGACGTTGT 77971 47 100.0 30 ............................................... ACTTCCACCCAGTAAGCTTTGTTCCACACT 77894 47 100.0 29 ............................................... AATGTAGTTGTGAACATTGCAGATTCACA 77818 47 100.0 29 ............................................... TATAATTATGGTCTACCAACCCACCCGGG 77742 47 100.0 30 ............................................... AAACGTGCCGATGATATTCTGCATCAACTG 77665 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ================================ ================== 37 47 97.5 29 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Left flank : AAGCAGAGAGGTACAACAACAGCAAACAGCAACCGTTAAACCGGTACAGACCGAAATAGCGGAAGATTTCATTTTCAACGAAAAGGATTTGGATTATTACTGGCGCGAGTATGCCAACCAACTTCCGGTAGAAGAGAAAGCAACTGCCGGGCGAATGATGAACATGAAACCAAAGTTACTGAACGATACGACTTTTGAGGTCGCTGTGGACAACGAACTTGTAGAGAAAATAATGACTCCTCTTATCCCGCAGATACAAGACCATTTGCGAAATAAGTTACATAACCGGAAGATAACAATGACCGTCCGCGTAAGTGCCCCGACTGAGAATATCCGTGCTTACAGCAGAGTGGAACGTTTCCAGATGATGAGTCAAAAGAATCCCGAGCTATTGAAACTGAAAGAGGAATTCGGATTGGAATTGTATTAATACAGATCTTTTAATTAGAGCTTTTGAAGCGTTAGGAAGAACTTACATAAATAAAATGAAAGCTTAGTAT # Right flank : TTAACCCACATTACTATCTGTGTATTAATACATTACACATAGATTTAGAAAATAAAAAAGAAGGTTGTTTCCTACAAAAAATCCCATCTTAAAATGGGATTTTTTACTTTCAAAACAACTCTAATTGCTGTCCCGGAGTATTAACACACTGAGCTTTCTTTCCATAAAACAATCCAATATTACTAAACTGTTTATCTGTTATGCACATTATTCCAACCTGACCAAACTCTGGAAGAAAGGACTTCACTCTTTTTATGTGTACTTCAGCATTTTCACTACTAGCACAATGACGGATATAAATAGAAAACTGAAACATAGTAAAGCCATCTTTCTGTAAATTCTTTCTAAAATCAGAATAAGCTTTTTTATCTTTCTTTGTCTCCGTTGGTAAATCAAAAAGAACAAGAACCCACATAACACGATATTCGCTAAAACGATCCATTATTTTTCCGGATATAAAATATGACGAAGTTCGCCACTGAAACATTTATAAAGTGATG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-31] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //