Array 1 391728-395844 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT706963.1 Corynebacterium urinipleomorphum strain Marseille-P2799T, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 391728 29 100.0 33 ............................. GAGTTCGGATTCCGCCTTCGACACGGACTCGGT 391790 29 100.0 32 ............................. AACGACTGCCCAAGCTCTTCAACAGGACGGTT 391851 29 100.0 32 ............................. CGCGCCTGGCATTTCGCCGATGAGGCCCGGCC 391912 29 96.6 32 ............................G GAATTGCAGGTCACCCATTGCGATACTGTGAT 391973 29 100.0 32 ............................. TCAACCGTGACCACATCCCCCACACGAAAATC 392034 29 96.6 32 ............................T TCAGCAGCCCAGGAGCAGGCTGCGTCTTGCCA 392095 29 100.0 32 ............................. CCGTTGTTATCGAACAGGTAGTTCAAGATTCG 392156 29 100.0 32 ............................. GCCCCGGGCACCCCTGCGGAGAACGTGGCCAC 392217 29 100.0 32 ............................. AACCTCCCGACCATCTGGAACGCTGTGAAATC 392278 29 100.0 32 ............................. ACCGTGACCGTGTTGCCCGAAACACGAGACCG 392339 29 100.0 32 ............................. CAGGGGCAGGCCATTGTGATGGAGGAGATCGC 392400 29 100.0 32 ............................. GCCGACAACCCAGCAGCAACCAGGGTGGACAG 392461 29 100.0 32 ............................. GCCGTGATGCCCGCATTCAACGCGATCCGCGA 392522 29 100.0 32 ............................. ATTTCGAGGACCGGGATGCCACGGGACTGCAG 392583 29 100.0 32 ............................. CACGAGACCAAGGAGGAGCCCATGAGCTGCCA 392644 29 100.0 32 ............................. AAGATCAATGGCTGGGGCTACGGCGTTGTGGC 392705 29 96.6 32 ............................T TGGGTGGATTCGTCGGTTTGGCGGTCTACCAA 392766 29 100.0 32 ............................. CACCGGGTGGTGCGCGCCGGGTCAGTGTTAGC 392827 29 100.0 32 ............................. CCCTGGAGCGCAACAATCAGAGTCGACTTACG 392888 29 100.0 32 ............................. GCGGATCAGTACCCCGGCTGGTCCATCGGCCA 392949 29 100.0 32 ............................. GCGGTCACCAGGAAATCCCACCCGGTCTTGAT 393010 29 100.0 32 ............................. CACCACCGACAAGGTGTCGAAAGCGCCTGCGA 393071 29 100.0 32 ............................. TGCGCGAGGAAAACGCCAAACACCGCAACAAA 393132 29 100.0 32 ............................. TCCCGCCCGATGAAAGCACCGGAGAAGTCCGC 393193 29 100.0 32 ............................. GCACTGAACAGTAAATTCCGTAGGGAGACTGA 393254 29 100.0 32 ............................. ACCCGGTGCTGCCACACCGGCCAACACAGAAA 393315 29 96.6 32 ............................G TCACCCCCGGCCAAAAGGTGCGCGAGGGGCAA 393376 29 100.0 32 ............................. CGCGCCGGAACCGGTCATACTCCAAGGACATG 393437 29 100.0 32 ............................. ACGAGCAGCCACCACCCCCTCCGACTCCGACG 393498 29 100.0 32 ............................. GTGGATCATCCGGCCGGAACCACGTTTGAGCT 393559 29 96.6 32 ............................G GCGGGTGGACATACGAGGACAAGCTCGAACTG 393620 29 100.0 32 ............................. GCAACGCGGACCAGGAGCAGGAGAGGGCGGCC 393681 29 96.6 32 ............................T GCGTCGCGGCGTTGCTTCTCGTCGGTCACCAC 393742 29 96.6 32 ............................G TCGAGGTGCAAGCCGAACTAGAACCTGTGTTT 393803 29 96.6 32 ............................G TCGAGGTGCAAGCCGAACTAGAACCTGTGTTT 393864 29 96.6 32 ............................G CGCACGCCGACGAAAAGGACGCCAAGAAACGC 393925 29 100.0 32 ............................. CAAGCGGAACGGAGACGAACCAACCGGAACCG 393986 29 100.0 32 ............................. GCAACGCACCAGAAACACGAACCATAACTAGC 394047 29 96.6 32 ............................G GCCGAAGATACTGGCAGTCTCAGCGAGGATCT 394108 29 100.0 32 ............................. CACCGCCCTGTGGACTAGTCGAGTCGTACCCA 394169 29 96.6 32 ............................G GTCGCTGACGCCGAGAAAAAGCTCGCGCGTGT 394230 29 100.0 32 ............................. CCCCGCGACGCAACTTGGTATTCAAGCCGTCA 394291 29 100.0 32 ............................. TCCCGGCCTGCGGTACGCTGCGCCGCCTCGTC 394352 29 100.0 32 ............................. AAAGCGGGGGTAACTCGTCTTTTAGCTGTCGA 394413 29 100.0 32 ............................. CTGTCCGGCGCGGACGAATACGTGTTCACGAA 394474 29 100.0 32 ............................. ATGTAACAGACCCCGCAGAGTGAATCCCAGTT 394535 29 100.0 32 ............................. TAGCCCGCCTGGGACTGCCCGCCGAACTATTC 394596 29 100.0 32 ............................. AGTGGCGGACCCGGCGAAGACTGGCCGATCAC 394657 29 100.0 32 ............................. CGCAACCAGGAAATCGTTGACATTAACGGCAC 394718 29 100.0 32 ............................. TCGCATACGTGCAGCGCTACTGGTAGCCGCCC 394779 29 100.0 32 ............................. CATTGGCCTGCTTGGGCGAGTTTTTCTCGTAG 394840 29 100.0 32 ............................. TCCCCCAGACCAACCCGCCACGCGAATACCGA 394901 29 100.0 32 ............................. CCAAAGGTGCTTCTGGATACCACCCAGCTTGA 394962 29 100.0 32 ............................. TCCCCCAGACCAACCCGCCACGCGAATACCGA 395023 29 100.0 32 ............................. CATTCATAAAGGCTGATGGCACCCCACTCAAC 395084 29 100.0 32 ............................. CTTCCGGGGGCTTGCGCTAAGTTGCCGAGGGC 395145 29 100.0 32 ............................. CCAAAGGTGCTTCTGGATACCACCCAGCTTGA 395206 29 100.0 32 ............................. AATTCCCGAACAGCGAACCGAACCACCCAGTT 395267 29 100.0 32 ............................. AAGATCCGCAAGCACAAGATCAAGTAGCCCGA 395328 29 100.0 32 ............................. TACATATGACAATCCGATAATTTTTGGTGCTT 395389 29 100.0 32 ............................. AGGGGCTGGATCGCGTTGCGGACACCGTCGGC 395450 29 96.6 32 ............................G ATCCCCATTGATGAGAGAAGCGACGGGATGGA 395511 29 96.6 32 ....................A........ GCCAGCACATGCGCCAGCTGCACCTCGTCCGA 395572 29 100.0 32 ............................. ATCTGTTGGTAACATTCGACCTGGGGAAACAG 395633 29 100.0 32 ............................. CGTTACGCGTACACCCAGAAATGAGCTACGTC 395694 29 100.0 32 ............................. ATGGGCTACATGTTCTACGGTTGTTCGTCGCT 395755 29 96.6 32 ............................T TCGCGGTGGTAGCGGACGTTGTCGCCGGAGAC 395816 29 96.6 0 ...........T................. | ========== ====== ====== ====== ============================= ================================= ================== 68 29 99.3 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : CTTGAGTGGTTCTGCAACCCAAGTGTCATAGACGGCCCCCGCCACTCCGGCTGTATCCATGAGGTGCTGCGGAAGATTGAGGTAGCCGTTCTCATCCCCTGACTTTGCCCACAGTGCCCGAGCTTGCTCGCTGAAGCTTGGAGCAAGCGCGTCCTCTCGAACGGATTGTTCGAGAAACGGTCTGCTGTGTCGCTCCCTCATGATCTACTCCTTATTGAAAAGGTTCTGTCGCTTGGATCGCTTACGTCTGACTTTAATGTACCTCAAGAAACTTAATCTTAGGTATCTCACAAGAACAACTTAAGATAATTCCTGGGCCGGGTTATTTAGTTATAACAACCTCTATTCACCTACGGTTAGCTCATCCCCATCTAATGGGGATGAGCCTTTGTTTTTGTGCGATTGGCTCACTTCCCCGCGTAAGCGGGGTACCATCAATTCGGGTTCGAAAGTTGTCCCTTCAATGAGTGGACAGCCATCCTTTCCGCAGGCTGGGAAGG # Right flank : CCGTGACACCGTCATCGCTGGCCTTGATGATGGGCATGTTCTTTGCCAACAAAGCACTGCGTCGTCCAGACTAGACGCGCGTCCAGGGGCTTTCCCTCCCGCACTTTCTGGAGCGGTGCGGGATGCCTCTGAGGTTTCTGGGGGCACGATCCCTATACCCATCTTCTCATCCGTTTGCCCTGCCGATCCCTGAGATCTCGGTAAAGTACGAAACGGACGTGCGCTGCCCGCGTGAATCCACCCCGGTGCCTCTTCGCGGCCCGGGGTCGTTTGCGCGGTTCAGTGCTTTGTAGAGGAGGCATCAATGACCAACCAGCAGCCACCGTTCGGCGGCGGATTCCCGCAACCGGGACCGGGAAGCCCAGGTACGGGAGGATCAAGTGTGTGGGGGTCCGGTGCTCCCACCGCGCCGTCGCAAGGGAATTCGCCGTGGGGCAATCCGGTCCAGGGCGGTCAGGATTTCGGCGGGGGCCAGTCTCCGTTCGGTGGCGCGCAGCAGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //