Array 1 4-1706 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLGC01000149.1 Acinetobacter baumannii strain ABBL072 contig-37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 64 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 124 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 184 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 244 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 304 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 364 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 424 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 484 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 544 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 604 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 664 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 724 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 784 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 844 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 904 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 964 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 1024 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 1084 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 1144 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 1204 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1264 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 1324 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 1384 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 1444 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 1504 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 1559 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 1619 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 1680 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 29 28 98.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTG # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1133-25 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLGC01000189.1 Acinetobacter baumannii strain ABBL072 contig-6000002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1132 28 100.0 32 ............................ AAAACGACCTTGTGACTCTGTGAATTCAATCT 1072 28 100.0 32 ............................ AGTTGCAACTTTAACAACTGACGGTACTGCTG 1012 28 100.0 32 ............................ ATAGTGGAAATACACGTAAGTTATTGATTTAT 952 28 100.0 32 ............................ TGTTGTTAGGGCTATTTCTGCTTTATCCGATA 892 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 832 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 772 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 712 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 652 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 592 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 532 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 472 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 412 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 352 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 292 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 232 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 172 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 112 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 52 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 19 28 100.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCT # Right flank : AAACAATTGCCTGACTGGTATGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 27955-22765 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLGC01000169.1 Acinetobacter baumannii strain ABBL072 contig-48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 27954 28 100.0 32 ............................ AAAACGTTGAACATTAGTAAGTGTTAGAACAC 27894 28 100.0 32 ............................ TTACGATGGCCAACAGAAATATTAGACATATA 27834 28 100.0 32 ............................ GATAAAGGTTGTATGCGCTCTAAAGCGTTAGT 27774 28 100.0 32 ............................ AATCCAAACAGCAAAACCGATGATACCTGCAA 27714 28 100.0 32 ............................ AGTGGGCTTATATCTCTTCTATAAAAAACGGA 27654 28 100.0 32 ............................ AATGCTGCTGTTGACGTGGCTGGTCCAGTTGC 27594 28 100.0 32 ............................ GGAGTCAGGCACACTATTAGATAGCAGTGTGC 27534 28 100.0 32 ............................ ATGATGAACCTGTCTTACCTTCAGATCCTTCT 27474 28 100.0 32 ............................ AAGCATTTCAGTTGCACCAAGATGAATACTTT 27414 28 100.0 32 ............................ TCAAGTGCAGATGCAGCCTAATTATTCTTCTT 27354 28 100.0 32 ............................ AAGAACGTTTGGCAGCAAAAGGAACATTACCA 27294 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 27234 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 27174 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 27114 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 27054 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 26994 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 26934 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 26874 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 26814 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 26754 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 26694 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 26634 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 26574 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 26514 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 26454 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 26394 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 26334 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 26272 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 26212 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 26152 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 26092 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 26032 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 25972 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 25912 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 25852 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 25792 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 25732 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 25672 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 25612 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 25552 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 25492 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 25432 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 25372 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 25312 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 25252 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 25192 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 25132 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 25072 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 25012 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 24952 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 24892 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 24832 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 24772 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 24712 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 24652 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 24592 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 24532 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 24472 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 24412 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 24352 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 24292 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 24232 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 24172 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 24112 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 24052 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 23992 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 23932 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 23872 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 23812 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 23752 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 23692 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 23632 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 23572 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 23512 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 23452 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 23392 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 23332 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 23272 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 23212 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 23152 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 23092 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 23032 28 89.3 32 ....T.......AT.............. ATCATCAATAAGTTGGCCTTGATTTAAATAGT 22972 28 89.3 32 ....T.......AT.............. AGATACAAACGAGTTCGCATCTCGACCAGAAG 22912 28 89.3 32 ....T.......AT.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 22852 28 89.3 32 ....T.......AT.............. TCAACCTGAACACAGACATACATGTTCTATTG 22792 28 78.6 0 ...GC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================== ================== 87 28 94.7 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //