Array 1 18014-17140 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084578.1 Sulfurimonas sp. SWIR-19 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================================================== ================== 18013 36 97.2 30 T................................... TGCGTGAAATAGAAGCAGAAGAAACATCTA 17947 36 100.0 30 .................................... TAGCTTTTAGTGCTAATAAATTAAAACTTT 17881 36 100.0 30 .................................... TCAAACTTCGTATCTCAGCTATGAGTTCAG 17815 36 100.0 30 .................................... CATCTACTATCTCAGCGTCTATCGCTTCAT 17749 36 100.0 30 .................................... GTTGACTTAAGTATATCGCTTACGCTGAAT 17683 36 100.0 30 .................................... AACAGGCACTGTATGCACCTGGCACAACTG 17617 36 100.0 30 .................................... GTGCTACTTGTTGTTGTTCATCAATCATAG 17551 36 100.0 30 .................................... CATAAAAAATTGTAACGTCTTCAGCTTCAG 17485 36 100.0 30 .................................... TTTGTTTCTCCTGCTGGTGTCAATATCCAC 17419 36 100.0 30 .................................... GTATCATAGGAGTAAGCGAAGCAAAAACTT 17353 36 100.0 30 .................................... TCTGAAATAAGAGCCACCACCTTTTTTTAC 17287 36 100.0 75 .................................... CGATAAATATTTATAAAAAGTTGCATTTTTTACACATTTTTTGCGTTTTTTGATAATTTTAGATACAATATTTCT 17176 36 83.3 0 G......G....A.......A.............CT | A [17153] ========== ====== ====== ====== ==================================== =========================================================================== ================== 13 36 98.5 34 ATTGTATCACACGCAAGTTTGTAGGGGTATTAAAAC # Left flank : GGCTAACTTAATGCCGGCAACTTCCACTATTTTAAAATCTTCTTCACTGCCTGCATGCATGTATTTGTCTTCATCGCCAAATTTAAAAAGTTTGGCTTTTGCTCTTTGAAAGACCACTTCCCCGTTATAAAAAACTTTGGCAAAGTTATAGACTTTCCCCTCTTTTTCTTCCAACATTGTCAAAACAATAATTTTGTTATGAGAAACTTTTTTCAGTGCCTCAGTGGCTCGTGGCGCAAAGGCAAGCATTGCATCCATACGCTCATAATCATAAGAAGTCAAACACACTTCAGGTGCAACTATAATGGTATTTTTTTCTGCTTGTGTGATAAGTGCCAAAAGTGTCTGTAAATTATTTTCATAACTCTGTGTCGTTTCAAACAAGAGAGAACAAAGGGTGTAGTCTAACATTAATCAATTCTTCTTTTTAGCAATATACTTAACATCTAAAATTTTATAGCTTTTTGTTGTGATTTTATCATAAAAGCAATTATAACATA # Right flank : AAGGCTACCAAATGGTAGCTGACTTTAGAGCATAGCTTCGGCTATGCTCCATTTTAAAAGAGTAGCAATTGCTTTGGCTCATTCTTTTCTTCAATACTTTCCTCACCAATAATTATCTCCATACTTGAGAACTGTTTATCTGTAAACATCAGTATGCGTATGTTTCCATGCTTTATGTTTCTATCTATAAAATCTTTTATACGTTTTTTTCCATACTTTGCAGAGTCAGAAGAAGCAAAAATCTTTCCATATACAGAATATTGCAACATCATATATCCCTCTTTTTCCAACTCTTTGTGAAACCAATGGTACCGTTTTTTATCTTTTTTACTTTTTGTCGGAAGATCAAACATTATCATTAGCCACATAACTCTAAAAGAACTCATTGTAAAATTTCTCTGTATTGATTCTTGGAAAAATAAGTGTTTCTGCACTTTGCATCATCATAGATTTCTTATACTCTCGTACAAACAAGCCAATGGCTGTTATCACAGTCGAAA # Questionable array : NO Score: 2.94 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.24, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTATCACACGCAAGTTTGTAGGGGTATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 945187-945731 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084578.1 Sulfurimonas sp. SWIR-19 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 945187 37 100.0 34 ..................................... ATTAAGACAACAGTGTAGCTGTCATAGCTTTTGT 945258 37 100.0 35 ..................................... GTAGCCTCATCTTTACTTAAAAAAGCGTTTATGTT 945330 37 100.0 35 ..................................... ATCCATATTTCTTTTATATAAAGGCTTTCAATATC 945402 37 100.0 35 ..................................... ATGGTTTAATTTTGTGTCGTGAGACATCTTTTAAC 945474 37 100.0 38 ..................................... GAACAAATAAGACTCAACTACATGGCCCATGTGCCAAA 945549 37 100.0 33 ..................................... ATCAGTAAACTTTTCAATAAAATTTTCTGATAA 945619 37 100.0 39 ..................................... GATATGAATTCTTCTGGTGATTGGCATCTTGATGTATCT 945695 37 86.5 0 .............................G.GT.TG. | ========== ====== ====== ====== ===================================== ======================================= ================== 8 37 98.3 36 ATCCGCCTCACACCACGTGAGGCAGACATTTCGAGAC # Left flank : TTTACTTTGAAGAGAAAATCGGTCCAAAACCGGCTCCAAAAAACAAAGCATCAGTCAAGTGGGCCAGAAAACTGTATGAACTATTAGAAAGCTAAAAAAGGTTTGCGAACTTTTGTAGCCCTGTTTTATGTGCTAGCAAGAATGAAAAGGTGTAAAAAAGTTGGCAAAACAGCAGGAATTCAGAAGTGAGGAAAATGATTTGCGAACTTTTAGTTTGAAGTAAGTTTGAAGTATCCATAAGTAGGCTGTTTTAAATCTAAAAAGAGACAAAAAAGTAGAGAATCTTAAAAGTCAAGTAAAATCAAAATATGATTTGCGAACTTTTTAAAGAGAGAAAACCCCTAACAACAGGCGTTCATTGAAGTAATATTGTTCAAAGAATGAAGTTGTATTTTGAAAAAAGTACCAGATTTGCGAATTTTTGGAATAATTTCCGGTACAAGGGACTTTGTCTGGAGTAAAAAATGCTATAATACTTTTAAGATATCCATAATTAGGCT # Right flank : CTATTAAAAAATTAATATTTTTGTGGAACCGGTTGTTACAATAGTCTTGCCCTTTTCAGCCCGGACTACAGAAAAAATTTAGGTTTTTTCTAGGTCATGCTTCAGCATAGAAAGTTCGCATATTGAAAAAGTTACTTCGCTTAATGACATTGACGTTGAAGTATTGGTGTCTGTAAAGTTTTTTTTATTTTTTTTGATTATAATGAAGTGTTAAAATCAGGAGTTATTATGTTTAAAAAACCTTTGGAATATATATTTTTGCCATCAGTTTTAAAAGAGGCATATACACAAATAAACAAAAACTCCTGTGGAATCGATGAGGTTGGTTTTACTCTCTTTGAAAAAGAGTTGAAAAAAAATATTGAAAAACTTGCAGATGATATAGTCAGAGGAAAATATGTGCCCGAACCTCTTAAAAAAATTGAAATCGACAAACCAAACAGTGATGAAAAACGACCCATAGCCATCAGTGCAATTAAAGATAAAATAGTACAAAAAGT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCGCCTCACACCACGTGAGGCAGACATTTCGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //