Array 1 583923-583024 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPT010000001.1 Enterocloster bolteae strain DFI.1.207 JAGLKCHL_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 583922 33 100.0 34 ................................. TGGATATGGATGCCTTGCTTCTCTCCTGTCCGCT 583855 33 100.0 33 ................................. ATTTGATATACTTAAGTTGAACAATCTTTACTA 583789 33 100.0 28 ................................. TATGCAATCAGCAGGGGGGGGGGGTCTG 583728 33 100.0 34 ................................. TTGCCAAACGGCTAGGCAAAACAGCCGTCTCATG 583661 33 100.0 34 ................................. TTCCATCCAACTTTTTCACCGTTCGTCCGAAATC 583594 33 100.0 35 ................................. CTCCGGTTCCACCGGAAATAACGATATAGTGGATG 583526 33 100.0 34 ................................. ATGAATTTTCACCTCCAATTTTTCTAATATTATT 583459 33 100.0 34 ................................. CCTGCTAGGGATGGCTTGTAAAACCCCCGTAGGG 583392 33 100.0 33 ................................. GTATGTAGGGTGGTATCCTATGAGTACGGTTCC 583326 33 100.0 36 ................................. CTCTGTACCAGAAGAGATATTATCTGGTTCTATATC 583257 33 100.0 34 ................................. TAACATTGACTTGTCCATTATAGACACATTCGAC 583190 33 100.0 35 ................................. TGCAAAGAGAGCTTGAAGCCCTGCAGAGCGAGGGA 583122 33 100.0 33 ................................. ATTACAGCTGGCACCATGCTTGCAGACCGGATA 583056 33 84.8 0 .........................C..TTCC. | ========== ====== ====== ====== ================================= ==================================== ================== 14 33 98.9 34 GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Left flank : TGCTGATACTGATTACATATGATGTGAATACGGAAACCGCTGCAGGCAGGACCAGGCTGAGAAAGGTTGCAAAGCAATGCGTTAATTACGGCACCCGCGTCCAGAATTCTGTATTTGAATGTATTTTGGATAATACCCAGCTGATAAAGCTAAAAGCCATACTGACAGATATCATTGATGAGCAGACGGACAGCCTTAGATTTTACAACCTGGGAAATAAACACACTACAAAGGTTGAACATGTTGGGGTGAGTAAAGGGATTAAAGTGGAAGAGCCGCTGATATTCTGACCTGGCTGCGGGCGGTAAGGAGGTTTCAAATAGTTTGGTGCGAACCAGAAGCAAACATGAATTTACGGGGGGATTCGCACCGGAAAAACTGCACAATGAGAACGGTTTTGGATGTGTGCAGGGTAGGTTGGCGGTGATTTGAGGGAGTATGATGTGATTTGATTGTGGAAATGTGATGAAGAATTGTTGGTTTTTTTGTGTAGTATTGCT # Right flank : TTCCGGTCAGTCTCCGCCCTCACAGCGAAGCAAGCTGAGAATCCGCCAAATTCAGGATTACGTTTAGTCAAAACATCATTCCCCTTTTTCTAAGAAAACAGTATAGTTTGAATCAGAAACATTAGCTATAACTAACAACACCCACCTTTGCCATAAACCTGTTATAGGGTATAAAGAATGCGGGCCTCCCTCACCCTTTCCATGCCCGAATCTCTCTAAGCCCCGGCACCAGCACCTTGGCGCTGGTTTCCAGAATGATCCGTCCTTTTTCAGCCGTGGCGCCTGACGGGTCTCCGCCGATTCCTATGGGTTTGCCGTCTGCTGTTTTCCAGTCCTCGGATACCCAGCCAATGGATACGTTTCCATAAGGCCTCAGTGCCTGATTGTCCTTAAATGCAGTCGGAATTCCTGCCTCTGAGGTATCTAACTTTACCAGAGACGGGTCCACGGCCATGACCATGGAGGTTTCCATTTCGCCTCCATGGAAGTCCCAGATATTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 278519-279089 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCPT010000006.1 Enterocloster bolteae strain DFI.1.207 JAGLKCHL_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 278519 33 100.0 34 ................................. TTAATATGCATATTCCAATATTGTAGTTATTTTT 278586 33 100.0 34 ................................. AAATTTGCATGGGGGAAGATTCCCTCATACTCAT 278653 33 100.0 35 ................................. TGTAATCGTACAGTACTAAATCTGTTTTTAAATAC 278721 33 100.0 34 ................................. CTTAATGTAATTAAGAGCCGACGAACCATACGAG 278788 33 100.0 34 ................................. TTCTTCACCTTGGCGGCCAGGGTATCCGCTATTT 278855 33 100.0 34 ................................. ATACTCAATTAGTCCCCTTACTTGTCTATCTAAC 278922 33 100.0 35 ................................. TGACCCTGGGCCGGGACCTATCAAACCTCCTTTAC 278990 33 100.0 34 ................................. ACTGAAAGTGGTAGCAAGTATGACTTTGTTATAT 279057 33 81.8 0 ......................CA..CCA...G | ========== ====== ====== ====== ================================= =================================== ================== 9 33 98.0 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : AAGTTCTGGAACTACCTGAAAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAGGCGGGAAAGCTGGCTGCTGTAATGGAACGCCAGGGCAGAGTACTGCGTATTTACGATGCAGAAGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCCATATATCCGGAACAAAAGAGGCTTGTATTGAAAGAGTATCCGTCGGAGGCGGCAGAGGCTTTGCAGCATGCAGGATATATGCGGGAAATGAAGGATTATGTAATATATAAGTAGAGTTGGTTTCTGTTAGTTGGGAGCCCTTCAAACCAGGTGCGAATGCCAAGCTGACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGAGGAAAAGGCTGTGAAAGCGGGCTGGGTGAATGGACTGAATTGGTTGAACTGGGGAGAGAAGAGCATAATGCATAAAATGTTAGGGGGGATGTGGAGCAGGTTTGGATAATTTTGAT # Right flank : GATACCTGTAAGCCCCTAAATTGATGCAAAAGGAAAATTGCTCCCCACGTACCTAATGCATTGAAAGCAGCCATAATTATATATTGAGAATTCGCAAAACATCAGTTAAAAGAACATATTAACAGTATCCCGGTCAACAGGGAATCCGTTAAGCGCATACCACCCCCCCAAGCAAATAACATCCGCCCAAAAAACACCAACATAAACAAAGGAGTAACACATATATGATTGAAATAATCTATAAAGACAAACGCTTTCTTGTTAAGGGCAGCTTTTCCATAGGAATAGCAGGAAACTATGTAAATGAGGATTTTGGGGACGAGAATATCATGATTAACGATACGTTAGAGGAAATCATGAAAGAATTGCAGGATGAGGACTCTTTTTGGTACAAGCCGCTGTTTCCCTATCTTAAATCTGAGACAGCAGACAGTGGCGGAATAGCCAGAGGTCTTACCGCGTACTACAATCAAAAGGAAAAAGAAATCAGGGAGAATGAA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //