Array 1 27555-33154 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJTI01000022.1 Rhodopseudomonas faecalis strain JCM 11668 Ga0074893_122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 27555 32 100.0 35 ................................ ACGTATTCCGAGTTGAACCCAATCTCGATCGGATC 27622 32 100.0 36 ................................ GCCAACGGCGAGGACGTCGGCGCCGTGCTGATCAGG 27690 32 100.0 34 ................................ TTCCGAATATGCTCGATCTGCCTCATGGAGCGCA 27756 32 100.0 36 ................................ ACCTGGGGTGCCATCAGCAGAGAGAGCGCTTGCCAA 27824 32 100.0 34 ................................ CAAGAATGCCAACCTGAGAAGCATCACGACGCGC 27890 32 100.0 33 ................................ GCGTACTTGTCGCAGTCCCAACTCGCGAGGAAA 27955 32 100.0 35 ................................ GTTGCGTCTACTGTTCCTCCATAAACGGCCCTATC 28022 32 100.0 34 ................................ ACATGCGCAGCGGCCAGCTTCCGGTTCGACGTGC 28088 32 100.0 34 ................................ ATGGTCACCGGCGCGCTGGCGCACGAGGAGGGCA 28154 32 100.0 35 ................................ AGACCAAGCGATGCGACATCCACGGGCGATCACCC 28221 32 100.0 34 ................................ ATCGCGTAGCAGTTAGTGCAACCGGGCGATGTGA 28287 32 100.0 35 ................................ CGTCAACTCCTATCGAATAAATTTCCGGTAGCGGA 28354 32 100.0 36 ................................ ATCGGCTACACCACGTCGCAAGCCGGATCGCCGGCG 28422 32 100.0 34 ................................ GGTCGGACGGTTGTCCCTTGCAATGCTGCTGCCG 28488 32 100.0 34 ................................ CTGAAGATGTGGAACTCGCTGACAGGTACATATT 28554 32 100.0 34 ................................ TGCATTTCGGCGCCCCTTTGCGCGATCAGTTACG 28620 32 100.0 35 ................................ ATATCCGCGCGTGCTCGCCGACGTGGGCAGAAACG 28687 32 100.0 33 ................................ TTCTTGCAGATCGGAAATCTTGCCAGCCACGGC 28752 32 100.0 35 ................................ CTTCGCAGATCAAGGATTATGCGGAGAATATCGAT 28819 32 100.0 36 ................................ GGCGATTTCGTATCCGGAATGCTCGTCAGCGCGACG 28887 32 100.0 35 ................................ CCCGATGCTGAGGGCGGGCCGAACGGTAGCGACAA 28954 32 100.0 35 ................................ ATCAGGGCGAAGAACATCCGGTGATGCCGGATATT 29021 32 100.0 33 ................................ CTCTATCAATTGAAAATGAAGTACCCGGGTGGA 29086 32 100.0 34 ................................ TGTCAGTGCGTGGTATTAAATTGGAGGGTTGATC 29152 32 100.0 35 ................................ AACGTCAGTTGCTTGCTCATGTCGTCACCTTGCTG 29219 32 100.0 34 ................................ GACGCGATCGGCAAACCCAAGAGCCACGGCGCGC 29285 32 100.0 34 ................................ ATCAGCGATCTTGGTTGCGGTGCCGAACTTGCCA 29351 32 100.0 34 ................................ GCCAACGCGGCTTCAATCGCGATCCGTGCCTCGA 29417 32 100.0 36 ................................ GAGCGCACGGCCGCGCCGTGGTGCAGACGCCGTGGC 29485 32 100.0 35 ................................ CGGCCGGTGGCGTGCTGCTAACCGCTGGAATCGAC 29552 32 100.0 34 ................................ GCGTCGGCGAGTTTCTTTCCCGCCATCTCGAAGT 29618 32 100.0 34 ................................ ATGGATCAACGGATAGCGACGGATGGAGAGGATT 29684 32 100.0 35 ................................ CCAGTCGATCGATCGCGAACGACCAACCACAGGAA 29751 32 100.0 34 ................................ CTGGCCCGCCGATCAATTCAGCCATTCGTCGTCG 29817 32 100.0 33 ................................ AGCTGTCCATCGCGATTGATCCGGACCAGCAAT 29882 32 96.9 34 .............................G.. TCCGCAGTCGATAGCCCCTGTGCAAAATCGAACC 29948 32 100.0 35 ................................ GGCACCGCCGCTGACCTTTCGGACTTCGCTGGTGT 30015 32 100.0 33 ................................ GTTGCAGAGGTTGGTGTTGACGGGCTATCGCTG 30080 32 100.0 35 ................................ CCCAGTTTCCGCAGAGGTCAACCCATTGTCGCCAC 30147 32 100.0 33 ................................ TGGAATGGAATAATGCGGTCGCCAAGGCTGCGC 30212 32 100.0 33 ................................ TTGACCGGCAAGGGCTGGATCAGCGCTGAGAAC 30277 32 100.0 35 ................................ AAGTTGCTGGATGAAGGTACGCACGAGGAAGTATT 30344 32 100.0 34 ................................ ATTGGCCGCAGCATGTCGCATATCGCTGCTTACC 30410 32 100.0 35 ................................ GGTCGAAGATGGGATTGAATTTCTCAAGTCGTACG 30477 32 100.0 33 ................................ ACCACCACGACTGGCAAGCGCCGGTTGGTTGTG 30542 32 100.0 36 ................................ CAACATTGTGACGGTGTAAGTCATGGCGAATGTAAC 30610 32 100.0 34 ................................ GACCCACGTTTGACCGGGTGCAAGTTGACGAACG 30676 32 100.0 33 ................................ GCCGAACTACCTGGGATTTTGCAGGTGACGGTC 30741 32 100.0 35 ................................ GGCTGATAGAAATACGGAAGACCAATTGATCCGTC 30808 32 100.0 34 ................................ CAGCCAAAGTAGTAATTATCAGTATAGCCATCTA 30874 32 96.9 36 C............................... AAGGAACGCTGTGCGCCGGCTGCACACCCTCAGATG 30942 32 100.0 34 ................................ TCGTTCTCAATCCGATAGATCAGCATGTCAGTCA 31008 32 100.0 35 ................................ CACTACAACACCGGCGCAATCAAGCGGGCGTCGTG 31075 32 100.0 33 ................................ TTCCGGGTGTACCCATGGCGGGGGCCTCTTGTT 31140 32 100.0 34 ................................ GAGCCGATGGAAGCGATGCTGCTGGCCAAGGCAC 31206 32 100.0 34 ................................ GGCGACATCGCGCCCGAGACGGGTCAGCGTTGCG 31272 32 100.0 34 ................................ CAGCCAAAGTAGTAATTATCAGTATAGCCATCTA 31338 32 100.0 35 ................................ GGCTATTTCGGCGAAGGCGAAGGCTACGGCGAAGG 31405 32 100.0 33 ................................ ATGGCGTCCTGCGGGCCTTTCAGCCGGCGGATG 31470 32 100.0 33 ................................ CCGTCGCAGGGCGATCAGTACTGGATCGAGCTG 31535 32 100.0 34 ................................ CCGTATTTCCCAGAGATTCTGAAGGCGCTGTCGC 31601 32 100.0 33 ................................ GCGGACGGGCAGGCCGGTCGCAAGTGACCACGC 31666 32 100.0 36 ................................ ATGCCTGCCGGCGGCCGAGCGCTATCGAGGTAGCCG 31734 32 100.0 34 ................................ CGGTGCTGGAGGTTGCTTTGAGCAGCGCCAGCGA 31800 32 100.0 33 ................................ TGTTGCGATCTTCGTTTGTCGGCTGATAGGGCG 31865 32 100.0 34 ................................ AGTCCCTCCGAAATTGGGTGTCGAGACCGTCATC 31931 32 100.0 35 ................................ GTTGTCGATCAGGATCGGAGTGCGGTGGGCTGGGT 31998 32 100.0 33 ................................ ACGACGACGCCCCATCGGCGGGAGGGACGCCAT 32063 32 96.9 33 ...............................T TTCTACGACCCGCGCTCGGTGAAGTCGGATTTC 32128 32 96.9 36 ...............................T CGGGCACTCGGAAAGGGCACGCATCACCAGGGCGAC 32196 32 100.0 34 ................................ CAGTTCGAGCGCGCCGAATTTACAGATTTGCAGC 32262 32 100.0 33 ................................ GGCGTCTCTGTGCTGAGATACTTGGTGTTGGTC 32327 32 100.0 34 ................................ CCCACCTTCCGTTTTGGAGCGCCCTGAAATGAAA 32393 32 100.0 34 ................................ GTGACGAGGAAGTAATTGCCGCGAAGATCGCCGC 32459 32 100.0 34 ................................ CATACATGGCGAAAAGCCTTTTGGCCGCCGTCCA 32525 32 100.0 34 ................................ AGTTTGACCTGGACGGGCGGACCGGAGCGACGTT 32591 32 100.0 34 ................................ TCCTGGCTGGCGGTGGAGCGCTTGCCACAGGGTT 32657 32 100.0 36 ................................ CGGTCCATGGCGCGCAACTATTCGCTCAAGATCGAT 32725 32 100.0 34 ................................ TGACTTTCCAGCACATGAGAGGGCGAGTCGGCGT 32791 32 100.0 35 ................................ GTCCCAGGTAAGCCCAAGAGCAGCCATCATCGCCT 32858 32 100.0 34 ................................ TCTTGCCAGCCAACTTGCGCTCAGTCGTCTTAAT 32924 32 96.9 34 ...................T............ GGGTGGAAGCCGTCAACCTATGCTTCTCACGAGA 32990 32 96.9 35 .............................G.. CTCAGCGCGCTCGATGCGCTCAATGATGGCCCGAA 33057 32 100.0 34 ................................ AGCGCGGCTTCCAAGTCAACCAAACGTGGCGACG 33123 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 85 32 99.8 34 GTCGCTCCCCTCGCGGGAGCGTGGATCGAAAC # Left flank : CGGACGATGCGGACCAGCAGGTGCGAAAATGCTTGTTTTGGTGACCTACGACGTGCGGACCAGCGAACCCGGCGGTCAGGCGCGGCTGCGGCGGGTGGCGCGCGCTTGCCAGGATTTTGGCCAGCGCGTGCAATATTCGGTATTCGAGATCGAGGTCGACCCGGCGCAATGGACCGCGCTGCGCGCGAGGCTGGAAAGCCTGATCGCGCCGCAGCACGACAGCCTGCGCTACTACTATCTCGGCGCCAATTGGCGCCGCCGCGTCGAACATGTCGGCGCCAAGCCCGCGACTGATTTTGGCGAGCCGTTGATCGTCTAAAACCGCGCGCGAACCTCAAGCAGACGCGCCGAAGCCGGGACGTTCGCGCTGCGATAAATCAGGCCATTTCAGGTGTTTATCGCGCGAGCGGCCGATTTGGACATCGTCTCCCTCACCCAACGCCGATATTCGCGCGACGCGGACGATTTCACGCGCCACCACAATCGGTTATTGGTGGGGA # Right flank : CACTATAGCTAGCCAAGAACGATTTCACTCCGACGTTAGCAACGCACAATGAATAGGCTAAGATGACATTCCTCACTTCTAATATTGCACACGTAGAGGACACAATGTTGAAAAGACTTTCAGCTGAATTTATTGGTACTTACTGGCTTGTCTTCGGAGGTTGCGGCAGCGCGGTCTTGGCTGCGGGCTTCCCACAATTGGGTATCGGCTTCGCTGGCGTCGCGCTTGCCTTTGGCTTGACGGTGCTGACCATGGCTTATGCCGTGGGCGGGATTTCGGGGGGACATTTCAACCCGGCGGTTTCTCTCGGACTGTTAATCGCCGGCCGTTTCGACTGGAAGGAGCTTTTTCCCTACTGGATCGTTCAGGTCATCGGGGGGCTCGCGGCCGCCGCGTCGCTTTACGCTATCGCGAGTGGCGCGCCCGGTTTCGCGCCCAACGGCTTCGCGTCCAACGGCTACGGCGCGCTGTCGCCCGGACATTACAGCTTGGCCTCGTGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCTCGCGGGAGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCACGCGGGAGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 20057-20221 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJTI01000023.1 Rhodopseudomonas faecalis strain JCM 11668 Ga0074893_123, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 20057 32 100.0 34 ................................ AGCGAGCCTTACAGGCTCACGGGCGGGGCAGGCC 20123 32 96.9 35 ...........C.................... GTGCCCTCGACAGTGCGGCTATCAATCTGCCGATG 20190 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 99.0 35 GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC # Left flank : TTCCGGTCGCGCGCTGTGCAGCCGGTGCCAGAAGTGAAGACGGAAAGCTTGGCCGCGCACTAAGCGCGGCCTTTCCCGTCAGCTGCTATCTTCAAACAATCGCACCGTTCAGGTGCGATTGTTTTGTGGACCTGGCGTTGTGGGTAGCGCCGGGAGCGATTGGCTGTGCTCACGAGTCCAGCCGACCGCCGCGCTGACATGCGCTGAACCGTCACCAGATCTGGGTACGCACGCGGCAATCGCCGCGGGCGAGAATGGGCGTTGTTTCTGCAACGCGCGGTACGCCAACATCCGTGGTCGCCCATTGTCGTAGCTGGTAGCAGCCGCGCAGAGAATTTTGGCTGCGCGCACCACAAGCGCACGCGCCCTGCCCCGCCGCTATCGTTGCAGGCGCAAAATGAGCCCGCGCGAACATCGAGCGTCATCCAGCGCTCAGCCCCCTTGAGCTTCGCGCATCGCGGCTGATGTCAAGAGGCGCCGCCATCGGTTATGGATGGACC # Right flank : CCACCACGCCCCGCGCCCACTTGCCCTCACAGCGGCGGGATGATCTTGCCGGGGTTGAAGATGTTGTCCGGATCGAGCGCCTTCTTCACCGCGCGCATCGCCTCGATCGCCTCGGGGCCGAGTTCGGCCACCATGTATTTCTGCTTGCCCTGGCCGATGCCGTGCTCGCCGGTGCAGGTGCCATCCATCGCCTGGGCGCGCTCGACCAGCCGGTGCATGAACTCCTCGCCGCGCGCCATCTCTTCCGGATCGTTGACGTCGCACAAAAGCGAGCAATGAAAATTGCCGTCGCCGACATGGCCGACGATCGGCGCGGTCAGATTGAGGCGCTGCAGATCGGCTTCGGTCTCGACCACGCAGTCGGCGAGCCGCGAGATCGGCACGCACACGTCGGTCGCGACCACGCCGGCGCCCGGGCGCAGCGCGCGCACCGACCAATAGGCATCGTGCCGCGCCTGCCACAGCTTGCTGCGGTCTTCCGGGCGCGTGGTCCAGGAGAA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 164035-161934 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJTI01000006.1 Rhodopseudomonas faecalis strain JCM 11668 Ga0074893_106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 164034 29 100.0 32 ............................. GCCTTGGCCAGTTTGGCCTCGGAGCCGCCGGC 163973 29 100.0 32 ............................. CGGCAATATGCCTTCTTCGCCATCCTCACCCA 163912 29 96.6 32 ............................A TCTGACGCGCTCCTTTGAAACCGGCCTACCTT 163851 29 100.0 32 ............................. CCGAAGGTCTACAAAACAGGCTGGCTGCCGTG 163790 29 100.0 32 ............................. CCCGTTGGTCAATCGGGACCACGCCACGAACG 163729 29 96.6 32 ............................T GGGACTGGCGATCGTTCAATTGCTGGTCGTTT 163668 29 100.0 32 ............................. CCTTTGCTGACCCGGTCCGCGGCGCTGAGGAG 163607 29 100.0 32 ............................. GTATCCGCCTCAACAACGCGATGTTCGGCCTA 163546 29 100.0 32 ............................. TTCTTTGTGAGCTACAACGCAGCTCTGGAGGA 163485 29 96.6 32 ............................A GCCATGAGTGCAGCCTGATCGCCAAGAAAGAC 163424 29 100.0 32 ............................. CTGTACGCATTCGATGCCTATGGCGCCGATGG 163363 29 100.0 32 ............................. AACAGGAACAATCAGATCGACCCACACGTCAA 163302 29 100.0 32 ............................. GTGATGGAGCTGAGGGAGGTCATCGCGTTGCC 163241 29 100.0 32 ............................. GACTGGCACGCCGAGGCGTTTCGGCTCTTTGG 163180 29 100.0 32 ............................. GCCGAGCCGGTAGCATCACCATCCTACAGCGT 163119 29 100.0 32 ............................. GCATCAACGACAATCCGAAGCGGCGCGATCTG 163058 29 100.0 32 ............................. ACGAAAGAGCACGCGATCGAGGTTGACGAAGA 162997 29 100.0 32 ............................. GCTCAGCATCGTCCCGTCAGATGTCGAAATGG 162936 29 100.0 32 ............................. GACTACGTCCGCGCCGCGACTTTCCGAGAAAT 162875 29 100.0 32 ............................. CGCAGCGATGTCCTCGCTATGAAAATCCTGAT 162814 29 100.0 32 ............................. ACAACCGCCGCTTACATCCTGGCGCTTGATGG 162753 29 100.0 32 ............................. CATTACTATTCGTTGCCCGAAATGCGGCTCGC 162692 29 100.0 32 ............................. GCGGTTAAGGCCGAAGTGGCGCGGGTCTGGCG 162631 29 100.0 32 ............................. CCACTTGCGGATATCGGCGATTTTTTCGCCGC 162570 29 100.0 32 ............................. GCTGCCGTCGCCGCATCAGCGCCGCTCTGCCC 162509 29 100.0 32 ............................. CCATTCAGCCATCAGCGCGCGGTTGTCTCCAA 162448 27 93.1 32 .................--.......... TGGTCTGCGGCGACCGCGGCCAACAAGAACTC 162389 29 100.0 32 ............................. CTCATCAATGATGCCTCCGGCGCTGATGGTGT 162328 29 100.0 32 ............................. ACCACCACGGCGGCGGCAACGGCGGCGGCCGG 162267 29 100.0 32 ............................. ATCACCCCATGGATGCTGGAGGACACCGATCA 162206 29 100.0 32 ............................. CCGCAGGAAATGCAGGTCGGGCCGGGGCCGAT 162145 29 100.0 32 ............................. TCGCTGATGCTTGCGGAGCTGGCGCGGCGGGC 162084 29 100.0 32 ............................. CAGGCCAACGCCGCGGCGGGGCTCGGCGCCAA 162023 29 100.0 32 ............................. GGCGCGAACATCTCGCGCGCCGACGTGTCTGA 161962 29 79.3 0 .......................TCCAGA | ========== ====== ====== ====== ============================= ================================ ================== 35 29 98.9 32 GTGTTCCCCGCACGCGCGGGGATGAACCG # Left flank : CGGATCATCCCGTCCATCGAGGAGGTATTGTCCGAAGGCGGCCTCGTGCCGCCCGAGTCGCCGGAGGAAGCGATGCCGCCGGCCTTTAGCGATGGGGAGCCTTCCGGCGATGCTGGTCATCGTGGTTGAGAATGCACCGGACCGGCTGCGTGGGCGGCTCGCGGTCTGGCTGCTCGAAATCCGCGCCGGCGTCTATGTCGGCGAGTTTTCCCGCCGCACCCGCGAGCGCATCTGGACCCTGGTCAAAGAGGCGATCGGCGATGGCAATGCGGTGATTGCCTGGAGCGCACCGACCGACGCCGGCTTCGATTTCGATACGGTCGGAGCGAACAGGCGGAAGCCGGTCGATTTCGACGGTTTTAAGCTGGTACAGTTTCGTCCGCCTGCAACAGGCCGGTCAACGATCTGACGGCGCGGCCCCGTCACCTGGAACAAACCGAAAACGCCGGTGCGCTGTTTGACATTGTAAAACGACGCAGAATCAATGCTTTCTGCGAAGA # Right flank : GCAAGCGGCGCATCGCTGCGAAGTCGGTGCCGAGGGACGGTCTGCAACAGAAAAAGTTGTTGCAGCATTGTTGCAGGTTGAACCCCACTTTCGCCCTATGGTTGCAAAACGCGCGTTTGCCCGTCAACAGATTTTGCAAAATACAATCAAGGGTTTGTGGCGGAAGGGGTGGGATTCGAACCCACGGTACCCTTGCGGGCACGCCGGTTTTCAAGACCGGTGCCTTAAACCACTCGGCCACCCTTCCTGCTCGACGGATCAGGCACTTATCAGACCCCGCGGCGGCACGGAAGCCCTGTTGGCCATCAATCGGGGGCTCGCGCCGGCGTTATCGCGCGTTCGCCGCGATTTGCCAGGGCAAGCTGGCATAGAGCCGCGTGCCCAGCCGCGCCCGCCGCGGCTTAATACCAACGGAAATTGATACCAATCCATCCGCATGTCATGGCCGGGCTCGGTCCCGGCCATCCACGTCTTTGATCTTGCAGCGCTTCCAAGACGTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCTCGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //