Array 1 1-292 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXFY01000115.1 Malaciobacter molluscorum LMG 25693 strain F98-3 NODE_115_length_292_cov_339.139, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1 30 100.0 39 .............................. AAAAGACTAGAATCAAATGAGATTATAAACTTCTATGCT 70 30 100.0 35 .............................. TGTCAATAGCACTTTTACTATTGGTAACTGCTTCA 135 30 100.0 34 .............................. CTGTTTCTCCTAAACTTTGAGCTAGAGTAACTGC 199 30 100.0 34 .............................. GAACATCATCTTTAAATATTTGAAAATAAAAAAA 263 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 5 30 100.0 38 CTTGAACCAAAACATATGATGTATTGAAAT # Left flank : | # Right flank : | # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAAACATATGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 192-29 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXFY01000117.1 Malaciobacter molluscorum LMG 25693 strain F98-3 NODE_117_length_224_cov_145.835, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 191 30 100.0 34 .............................. GAACATCATCTTTAAATATTTGAAAATAAAAAAA 127 30 100.0 39 .............................. AAAAGACTAGAATCAAATGAGATTATAAACTTCTATGCT 58 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 3 30 100.0 37 CTTGAACCAAAACATATGATGTATTGAAAT # Left flank : TGTTTCTCCTAAACTTTGAGCTAGAGTAACTG # Right flank : TTGTCAATAGCACTTTTACTATTGGTAAC # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAAACATATGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 32-2143 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXFY01000028.1 Malaciobacter molluscorum LMG 25693 strain F98-3 NODE_28_length_31009_cov_127.726, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 32 30 100.0 36 .............................. CCTGCAAAGTATCTTAACAGTCACACCTGCGGTGCT 98 30 100.0 37 .............................. TCGGATAGCTATTCGGATTATCATCAAAACCAAAATA 165 30 100.0 34 .............................. AAGCCATCTAATGTTATTGTTTCAGTTGAACTTA 229 30 100.0 36 .............................. ACTAGGGGTACAGAGTTTAGTGCTTGTGTTGATTTA 295 30 100.0 34 .............................. GTAACAAACGCTAATCTTCTAAGTGAGATTTTAT 359 30 100.0 34 .............................. ATTATAGTCATCTTCTTTATAATTAATAGTATCA 423 30 100.0 34 .............................. ATTATAGTCATCTTCTTTATAATTAATAGTATCA 487 30 100.0 35 .............................. GCTTGTTTTTGTTGGGCTGGTGCTTGTTGCATTAT 552 30 100.0 34 .............................. AGAAGTTTTTCTGCTAAGTCTGCCCTTTCAAATT 616 30 100.0 36 .............................. TAAGTTTTTAATTTACATAACTTGTGTTTTGTTACT 682 30 100.0 39 .............................. ACTTACTTTAGATAAGTATGTAGAAGAGTTTAAATTAAA 751 30 100.0 36 .............................. AGCTTGGCAATAGATGTTATGCCTTATTATAAAGGG 817 30 100.0 36 .............................. TATCCTCTAACAATTGAAGGTGCTTCAATTAATGCA 883 30 100.0 34 .............................. AAAGACGGAGAGATACAAGTGAAATTCTTTAACG 947 30 100.0 34 .............................. AAATATAAGGAATTAGAACTTACTAGATATTACA 1011 30 100.0 34 .............................. CTTCGTATTTGTATTTTAAGTATTCAAAATTGTC 1075 30 100.0 34 .............................. TCTTTGATATCTTGAATAGTTTGACTATCAATAA 1139 30 100.0 35 .............................. TGCTTTTAAGTTTCTGCTCTTCTTTTTCATTGTAG 1204 30 100.0 35 .............................. AATATAGACAAATTAAAAGAAAAGGATAAATAATG 1269 30 100.0 36 .............................. GGAAGAGCTTAAAGCGTTATCTAAACTAGGAATTAG 1335 30 100.0 35 .............................. CCTATAAAAACTTTTAAAGGAACAGATTCAACATC 1400 30 100.0 35 .............................. AGTTATTTCATGGCTCATAGATTCAAACTCTTTTT 1465 30 100.0 36 .............................. TATATAAGCATTTAGCAGAATCTAATATGTTATTAA 1531 30 100.0 36 .............................. TTGATAAGATAAAGGCCTTTACTTGCATAATAATCC 1597 30 100.0 37 .............................. ATCTTTTTGGAGTTCCGTTAATGTATGATAGAATTTA 1664 30 100.0 36 .............................. CCCTAAAGCTACTGAAGATTGGATTAATGCTCTTGA 1730 30 100.0 34 .............................. AATCTTTCTTGTGTTCCAGTTCTTGCAAACTTAC 1794 30 100.0 34 .............................. GATTTACAAAAAGAATATTATTACCACAAAATTA 1858 30 100.0 34 .............................. AATCTTTCTTGTGTTCCAGTTCTTGCAAACTTAC 1922 30 100.0 34 .............................. GATTTACAAAAAGAATATTATTACCACAAAATTA 1986 30 100.0 34 .............................. AATCTTTCTTGTGTTCCAGTTCTTGCAAACTTAC 2050 30 100.0 34 .............................. GATTTACAAAAAGAATATTATTACCACAAAATTA 2114 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 33 30 100.0 35 CTTGAACCAAAACATATGATGTATTGAAAT # Left flank : CTGCAATTTCAAAATATTGATTGTTTGTTAAC # Right flank : TTTTATTTTAAATAAGTTTACTTTTTTTTATACTATATATTAAAAATAAATTAAGAAAAACTTATAATTAAATACTTCAAATAAATTAAACAAAAAATTCTTATAATACCCAAAAAAGTATTATTTAAGGGTATCTATGATTAAAAAAATTGATATGAATTCTGAAGAATTCCAAACACAATTTGAACTTACAAAAAAATTTACTGAAGATGTTATTGAAAAATATAATTTTGTTTTTAATCCAAATGAAGAGATAAATGAATCAATCCAACAAGGTCTTACAAGAAATCAAATGATTTATGGCACAAGATTCTGTCCATGTTTTATGGTTGTTGGCAATACTTTAGAAGAACAAAGAAACAATAGTGAAAATAGACTATGTCCATGTACTCCAGCACTTGAAGAAGAAATACCAACAAAAGGATCATGTCACTGTGGTATATATTGTACAAAAGAGTATGCACATAAGTTAAAAAAAGAAGAAGAGTTAAAAGAAGCTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAAACATATGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-91.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 1-880 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXFY01000054.1 Malaciobacter molluscorum LMG 25693 strain F98-3 NODE_54_length_911_cov_209.129, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1 30 100.0 39 .............................. AAAAGACTAGAATCAAATGAGATTATAAACTTCTATGCT 70 30 100.0 35 .............................. TGTCAATAGCACTTTTACTATTGGTAACTGCTTCA 135 30 100.0 34 .............................. CTGTTTCTCCTAAACTTTGAGCTAGAGTAACTGC 199 30 100.0 34 .............................. GAACATCATCTTTAAATATTTGAAAATAAAAAAA 263 30 100.0 35 .............................. GTAAGTTCTTTAACTCCTTTTGAGTTTGGAGCTAT 328 30 100.0 36 .............................. AACGGAGTCATAACTATATCCCCTTCATTGGTCCAT 394 30 100.0 36 .............................. AATGGAGACTTAAAGGTCATGCAAGAGATAAATTTT 460 30 100.0 36 .............................. TCTATTTGATTTGATGATACTGCTAAATAATAACTT 526 30 100.0 34 .............................. TCGGTCGAAGTTATAAGCATTCGCTGTTTCATCA 590 30 100.0 36 .............................. TCGAATAAAGGAATAACTAGAGTAACAGAACTTGAA 656 30 100.0 36 .............................. TGAAAAAGTTTTAAAATCTAGCCAGTCAATTAAATC 722 30 100.0 34 .............................. AAATTATTTATATACCTACCTTTAGCATAACTTT 786 30 100.0 35 .............................. GAACTTGAAGATAATATATCCATTGGTTTACCATT 851 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 100.0 36 CTTGAACCAAAACATATGATGTATTGAAAT # Left flank : | # Right flank : AAAAGACTAGAATCAAATGAGATTATAAACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAAACATATGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 690-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXFY01000065.1 Malaciobacter molluscorum LMG 25693 strain F98-3 NODE_65_length_690_cov_353.871, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 689 30 100.0 35 .............................. GAACTTGAAGATAATATATCCATTGGTTTACCATT 624 30 100.0 39 .............................. AAAAGACTAGAATCAAATGAGATTATAAACTTCTATGCT 555 30 100.0 34 .............................. TCACCTCTATTAATCTTTTCAACTGTTTGATTCA 491 30 100.0 35 .............................. CTCACTGCAATTTCAAAATATTGATTGTTTGTTAA 426 30 100.0 36 .............................. CCTGCAAAGTATCTTAACAGTCACACCTGCGGTGCT 360 30 100.0 35 .............................. GAACTTGAAGATAATATATCCATTGGTTTACCATT 295 30 100.0 39 .............................. AAAAGACTAGAATCAAATGAGATTATAAACTTCTATGCT 226 30 100.0 35 .............................. TGTCAATAGCACTTTTACTATTGGTAACTGCTTCA 161 30 100.0 35 .............................. CTCACTGCAATTTCAAAATATTGATTGTTTGTTAA 96 30 100.0 36 .............................. CCTGCAAAGTATCTTAACAGTCACACCTGCGGTGCT 30 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 100.0 36 CTTGAACCAAAACATATGATGTATTGAAAT # Left flank : | # Right flank : T # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAAACATATGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 12813-11989 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXFY01000005.1 Malaciobacter molluscorum LMG 25693 strain F98-3 NODE_5_length_150854_cov_113.881, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 12812 30 100.0 36 .............................. TATTTAGTGACAATATATGTTGAACCATGCGGAATT 12746 30 100.0 38 .............................. TCTGGTTTTGAGATAGGCAAAATATTATATTGCTTGCA 12678 30 100.0 35 .............................. GAGTATATTCTATCTCTTTTGTAACCTTGATATTA 12613 30 100.0 36 .............................. CAAAAGATGTTAGTTCTTCTGTATTTAGAAGATATT 12547 30 100.0 34 .............................. TGCAGGATTACTTTTAGGTTTATTCTCATATCCA 12483 30 100.0 38 .............................. AAGCAAATACTAAAAGCAACAAAGATTTACTTACAAAG 12415 30 100.0 36 .............................. AAAAAAACAGAAGAACATAAAACAACAACTTCACAC 12349 30 100.0 39 .............................. ATAATCTAACATTCTCTTTTGAAATTGTTAAAATATTAT 12280 30 100.0 37 .............................. AAACAAACAACAGTACCAAAACTTTATACAGAGCAAG 12213 30 100.0 34 .............................. CAAAGGTATCTTTTAACTTTAAAAGGTGAAGAAG 12149 30 100.0 34 .............................. TTTTCACTTTGAATAATGCTACTAATAATTTTCG 12085 30 100.0 37 .............................. AGTAGAGCTGTAATATTGTTTGCAGTTGCAATAACAA 12018 30 86.7 0 ..................A......T..TT | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 99.0 36 GTAGAACTCCAACATATAGGAGATTGAAAC # Left flank : AAAATCTATCATTTCAAAAACTTTACATACTTTGGATTATAAGTACACTACAAATGAAGAAAACTGGAAAGGTAAAATGGTAATTTTATATTTGCTTGATGTTGAAGCAAATGATAAGAATCAAGAAAAAAGACATGAAGTTTTCAAAGAAAAACTTAAAATTTTAAAAACTTTAGATAAAAATGAGCATATTTTACTTATATATGCAACGCAACCAAATTTTGAAATTGGTAAATATAAAGATAACTTACCAAAAAAATATACTTTTGTTAATAGTCAATTTACTTTAATAGAAAGACTTTATAGTGCATATATAATTTCAAATATTAAGGAATAACATTTTCCAACCTTTTTAACTAAAGATTGGATACAATACCTATGAAATAGTAGTTCTTTTAAAATTTATTGTTTTTTATAAAATGATTGGAAAGAATCTTTAAAAGTATTGTATTTTGGTATTTTATAAGATATTTTTATTTTAAAAGTGCCTATTTTTCTTA # Right flank : TTATAAATAACAATATTTTTTAAGAGTTTTGAAACCCTTTGGCTTATATACTATTTGTATAAATTATTTGGGAGGTTATTATGAGCAAAAAAAGAGTATTAATTACAGGTGGAAATAAAGGTATTGGTCTTGCTGTTTCAAGAGCTATGTTGGAGCTTGGGCATGAGATTATTATTGTTGCAAGGGAGTTTGAAACTTGCCCTTTAATTGGAGTAAAAGATGTAACTGCCATTGAGTGTGATTTATCAAAGTTAGATACTTTACCAGCTCTTGCAAAAGAGGTTGGAGATATTGATATTTTGATTAACAATGCAGGATATATGCAACCAAAATATACTTATGATAACTATCCAGTAGAAAGAAGAGATAATATTATGAATGTAGATTTGTACGCCCCTGTTGAACTTATGAATATCTTTTCTGAACATATGAAAAAACAAAAATATGGAAGAATAGTAAATACAGCTTCAATAGCAGGACAAATCGGACATCCTGATGTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAACTCCAACATATAGGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.10,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 1336-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXFY01000006.1 Malaciobacter molluscorum LMG 25693 strain F98-3 NODE_6_length_138676_cov_124.121, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1335 30 100.0 35 .............................. ATATTTACATATTTTGTATCAAAAACTCAAGATAT 1270 30 100.0 34 .............................. ATGAATTATTTAGAAACTATGCTAAACAAGTAAC 1206 30 100.0 35 .............................. GAACAAGATAAAGGTTTTTTTGTATCTGCAATTGA 1141 30 100.0 35 .............................. TAGAATCTATCTATTAAAGTACCTTTTCCTATTTT 1076 30 100.0 36 .............................. CAATATATAAACAATCAAAAGCAAAGACTAAAAGAT 1010 30 100.0 35 .............................. ATTATTAAAGAATTTGACATCAAAGTTTCAAACAA 945 30 100.0 35 .............................. TGTATTTAGTACGAGTAGCACCCTTTGAGCAAAAC 880 30 100.0 36 .............................. AACCGAAAAGCTAAAATCAATAAAAAAGCTATAATA 814 30 100.0 36 .............................. AAATATCATTTATAGGAAGTTTAAAACCCTTAGACA 748 30 100.0 36 .............................. TCGATCAAAGTTATAAGCATTCGCTGTTTCATCAAT 682 30 100.0 35 .............................. TTAGAGCCTTAACAAAGGCGTTTAAAAATAAGTTT 617 30 100.0 36 .............................. ACAAATACAGCACAAACAAAATTTATATTAGACTCT 551 30 100.0 35 .............................. ATAAAATAGAAATGCTAGCAGAGTATGAACAGTTT 486 30 100.0 34 .............................. GCTGTTGAGTTTACTCATTCATGGCGAAATGACG 422 30 100.0 36 .............................. AATAAAGGGAAGAGAATCAGCAAATAGTGAAACAAC 356 30 100.0 37 .............................. AAAGAAAGAGAGCTAGGTATAAAAGCTGGTTTTTGTT 289 30 100.0 36 .............................. TAATCTGCAATAGCATAACAACGATAAGAGACTCCA 223 30 100.0 35 .............................. TGTCAATAGCACTTTTACTATTGGTAACTGCTTCA 158 30 100.0 34 .............................. CTGTTTCTCCTAAACTTTGAGCTAGAGTAACTGC 94 30 100.0 34 .............................. GAACATCATCTTTAAATATTTGAAAATAAAAAAA 30 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 21 30 100.0 35 CTTGAACCAAAACATATGATGTATTGAAAT # Left flank : TACTAAAAGAGAAGGTCTAAGATGGCAAAAAAACAAACTTTTAATTACAACTATATATTTTTGTTTTATGACATAGCAGATGAATTTAGTGATATAGGTAAATATAGAGTTGCCAAAGTTTTTAAAATCTGTAAACAATACCTAAAACACCATCAAAAATCAATTTTCAGAGGAAATATAACTCCTTCTGATCAAATAATGTTAGAAACAAAACTAAAAAAAGTAATAGATAAAGACTTGGATTTTATCTCTATCATAAAGGTACAAAACTCTGGAAGCTTTGCAGAAGTTGTTATCGGAAATGATAAAAAAGAATCAGAATCCATCTTTATATAATTTTTCCAACCTACTTAAAAACAATATCATCTAAAAACAGCTATAATAAGGCACTTTTAAAAAGTTCTTTTACAACTTACTGTTTTAAAAGAATCAGTTGGAAAAACTTCTTAAAAGAACCAATAAAAGGGAAAGTGTATTTTAAGAATGCTTATTTTACTTTC # Right flank : T # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAAACATATGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //