Array 1 56827-56006 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHB01000005.1 Eisenbergiella tayi strain NML110678 BEI60_contig000005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 56826 32 96.9 33 ...........C.................... CATAACCTATGTAATTGAAGGAGCATAACCATG 56761 32 96.9 35 ...........C.................... TTCTGAAAATAGAGGACCTGCAGGAGCAGATAGAT 56694 32 90.6 32 ...........C.....T............T. ATCAACCCTGCTTTAATGAGTTCGTCTCTCGC 56630 32 84.4 34 .....A..C....C..TT.............. TATCATACGTATGTATTAAATGTTCAAAATCAAG 56564 32 84.4 35 .....A..C....CG..T.............. AGTTCGTCAATACCGGTTGTAGCTGTTTTTATATC 56497 32 78.1 33 .....A..C...ACG.TT.............. GTTTTAGGTGTATGCCATTTACTTACCTCAACA 56432 32 81.2 34 .....A..C...ACG..T.............. AGCAGATGCACGATACACATAATAATTACCCGCT 56366 32 81.2 34 .....A..C.T..CG..T.............. TTTAATATTCACTCCATCTACTTGTACAACTTTT 56300 32 100.0 33 ................................ GACCATGAGGATTTTCTAAGCATCTTTGATTTC 56235 32 93.8 34 ...A.......C.................... AGATCCGTGGACTGTCAGATGCAGAACTGCAGGA 56169 32 100.0 34 ................................ CATTTATCCACATAATACTTTGCAACTGCAATGA 56103 32 96.9 34 .............C.................. TCTTTTTGGTAATCTCACACAATGCGACCATCCA 56037 32 90.6 0 ...........C.C..............G... | ========== ====== ====== ====== ================================ =================================== ================== 13 32 90.4 34 GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Left flank : TTCATTAGCGTTATAGCTGATAGATATAAACGAATATTTGATTGCTTATTACCCTTAAAAACAGAACTAAAAATAAATGTAATTATTTGTTTGATAAATATGGAGATTAATTTTATATGTTTAGGACAAACATACACGATATAGATATTTTTTAGTATACTGGGGATCATTTTCTTGATTTATCTATGTGGTTATTCAGTAATACTAAGTAAAAAGTATTATTTGTATCATTTATTATGTAATATGTGAGTAGAAAATAAAAATCAGTGTTATTTGTTTTATATAGTAAAAGCAAAAGCAGTTTACAGTTTTAAGAGAGAGATAAGCAAGGTGCGAATGTATAGTGCACATGAAATTACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTGATGGTTTATCATATAAAGGTATTTAGAAATATTTGTGTAAAAGTTATATTTGTAGTCTAAATCTTTATGTTTTTTTGAATGTTTTTGCT # Right flank : ATGGATATCAAATGTTATATCGAACTTATATACAATATAATATTAGATGGAAAGACAGATGAAAATATGGATTGAAATATAGAATATATGTTAAGAAAAGAAATGACCATAGCCAAATATATAAGAAGTATATTTCACAATCTGTAGGAAAGAGTACATCAAAAGGCCATGTTGAGCCAGTTCATAAAGCTCTTGCTAAGCGCAGAAGAAGATGTACTATTCCATATAAAGATAAAAGAGGTTGGAATTTTGGGAGGAAAAGAAGCATCAAGAGGTTTTTTATATCAGGCATTTGCTTCCGTTCTTGAAGCGTTGTGTCAGAAAAATTGGGATAAAATTTATATAGAATTAAAGTCGAATGATGATAAAGTTGATATTGCATTAGAGGAAAATGGCAGAATTATTAAAAGTATTCAGGTGAAATCAACAATTAATACTTTTAGCAAAAGTTCAATACAAACATGGCTAAGTGATCTTATTCGTGACGATGTAGGCTCGGC # Questionable array : NO Score: 8.04 # Score Detail : 1:0, 2:3, 3:3, 4:0.52, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 60180-59620 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHB01000005.1 Eisenbergiella tayi strain NML110678 BEI60_contig000005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 60179 32 100.0 35 ................................ TTGCGTTGCTCTGCAGATATATGCCTGCCGTCATC 60112 32 100.0 34 ................................ TGATGCTCAGAGACAAAGATACTCCGGAGATACC 60046 32 100.0 35 ................................ TGGACAATCCATTGCATCGTATATCTCTGGTTCAG 59979 32 100.0 34 ................................ AAATCTGTCCGGCTTATAATCTTCCGCTTCCTGC 59913 32 100.0 34 ................................ ATAATAAGTACAATTAACGTATACTGGATTTTGG 59847 32 100.0 33 ................................ AATGTTATATGGGATGGCGTCCGCAAGAACTTG 59782 32 100.0 33 ................................ GACCATGAGGATTTTCTAAGCATCTTTGATTTC 59717 32 96.9 34 ...........C.................... TTCCTCCTGGAAGTAAATAGTGGTTCCCGGCTGT 59651 32 78.1 0 ...........CA.....CTT.AA........ | ========== ====== ====== ====== ================================ =================================== ================== 9 32 97.2 34 GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Left flank : ATCATGCGGATTTATGATATTATGAATGAAGTGATGAAGTGTTCCTTTGAAAAAGTGGTACAGGCGAGAGGAAACCGGGCCGGTTTGTATTATCATGGACGGATTGTGGACGCTTTTGAGAGGAAGGATGATGAAGCGGCTGAAAAAATAATGGATGAGCATATGAAAGAGTTGTATGAGAGCTTTTTTAATGATTTTAGGGATTGAGAATGCTGTATGGACTTATTTTATTAAGTAAACGTTATATTGAGTAAAAAAGAATTAGTGATATTTGTTTTTAGATGATAAAATAAGAGTTGAGTTTATAATTTTAAGAGGATCATAAGTAAGGTGCGAATGTATTGTGCACATGAAAATACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTGAAGGCTTATTATAAAAATATGTGATGATATATTTGTGTAAAAGTTATATTTGGGGGTTAAATGGTTATGTTTTTTTGAATGTTTTTGCT # Right flank : TGCATGACTGGTACGGACATTATTTATTGTATGTCGAAGCTTATGTAACATCGTGTTGAGTTTGGAGAAATAACGATGCTTATGTTGTCATAATGCTTTGGAAAAATTGTAACATCCGAGAAAGCTTCCAATAGAAGATACTGTGGAGGCAATAACAGTTGTGTTGAAGCATTTTAAGGTAATTTATAGTATGAAAATTAAGTATTTTGATTTAAACTAAAAAGTGTGCATAAATTATTTGTGTAAATATCTGAGTTATTTAAAAGATTATATGAGCCATGTTATAAAATATGGGAAGATCAAACAATTGTAGGAAGAGTATAGAAAAGGGATGAGTTATGGAACCTTCAAAAAAAGATTGGTTACTATATAGGGAAAAGATAGCAGGTTGGCAGGAAGCTTATATGGAAAAGCTAATAAAAGAATATGTCGATTATCTGAATGGTGACGAACCTGCATCTACAAAATTCTGGAGAATGGAAAAGCGTATCAAACAGGAT # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 72106-71214 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHB01000005.1 Eisenbergiella tayi strain NML110678 BEI60_contig000005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 72105 32 100.0 34 ................................ TTATATCCATATTATATACGATGTGACAAATATT 72039 32 100.0 33 ................................ ATCGGTGACAGATGAAATGTACCCGGTAAAGGA 71974 32 100.0 36 ................................ AGGAAATCGAGTGCGCTTTGGAATAATCCCTCTTTC 71906 32 96.9 35 .............T.................. AGAATAGTACTACGCTTACGGAAATAGGTGACTAT 71839 32 100.0 35 ................................ AATCCCTGCATTCTCTAAACACCAATAATCAACGG 71772 32 100.0 34 ................................ ACAGACAGTATCTATTGGAGAGGTATAACATATG 71706 32 100.0 33 ................................ AATTGAGCCGCCATGAATTCAGCGTCCTTTTTC 71641 32 100.0 33 ................................ CTATGAAATACCTAAAAAAGAGAAGCAGGAGAA 71576 32 100.0 33 ................................ TACGAAGCTGTGAAAGACCTTCCCGCTGAACAG 71511 32 100.0 36 ................................ ATTGGCAGGATTAGCAGCATTACGAAAAGTCTGCAT 71443 32 100.0 33 ................................ TTCCAGGGGAAGTAGGGTATGATATTTTATAAA 71378 32 100.0 34 ................................ CATTGCCTTGTTCTTGGCTTCCTGCTCTTCCTTT 71312 32 100.0 35 ................................ AATGAAAGAAGTCATCCAGCGCTACGGGCTGCCGG 71245 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 14 32 99.8 34 GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Left flank : AGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTTTTGTTGTTATAGCATAAGGAATAAGAACAATAAATTTTATAGTCATATAATAGTTTATTGTTAGCATGATTAGAGTTTTATTGAGTAAAAGTACTTGTTTAATTATGAAATTTGCGAACAGAGTTATTGTTAGTGCGAATAGGAAGTGCACATGAAATTCCCGAGAGATTCGCACCTGAAAAAGAGTTGTTTTAATGGGGAAGAGATTGAAAATAATTTATATAAAGATATTATGAGGTGGAAAATATAATAAGTATATAATTAAGTTTGTGTTATGAGATTGTTTTTTGGATATTTTTGCT # Right flank : TGTAAGAAGTCGCACCTTGCATTGATGTAAATTGCATATTATTCATAGTTAAAACTTATCCAATAGTAAGCTGTCGTTTTATGTATCTAAGAAATAAAAGAATACATCCACTAGACAACACATTTTCGCCCTTATGACGTTTGTCAATTATTATCTATAGTAAAACAAAGAACGATTTATAATACCTATACATTCTCTTACAAAATGAGGTGAAAAAATGGGAAAGAATGAAGATTCTTTCTTCCTGAATTACCTGCCAATAAGTATAACTTTGGTATCCCTGGAAAAGGCCGAATTACCTCCATTTTTGGGTTCTGCCCTTCGCGGTGTGATTGGACAGGCATTATTTCAGGATAAGAATGCCTACAATTATCTATATCACAACGGCAAAATGAGCAGTAATATGCAAGATATAATTAATCCGTATGTGCTCATTCCTCCTGATACAAAGAAGAAAATATATTTTGAAAAAGAAGAGCTAAACTTCAAAATACTTCTTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAAGCCTATACGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 73074-72910 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHB01000005.1 Eisenbergiella tayi strain NML110678 BEI60_contig000005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 73073 32 100.0 35 ................................ GTGACGGGCAGCAGGGCTGTGCTCACTCCGCTGCC 73006 32 100.0 33 ................................ CACAAGAGCAATTGTCTTACTATGCTGTTCCCG 72941 32 71.9 0 .............A........TTTGA..GGA | ========== ====== ====== ====== ================================ =================================== ================== 3 32 90.6 34 GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Left flank : ATGAATATCCACCTTTTTTCTGGAAATAGGAGGCTGTCATGCTGGTATTAATAACTTATGATGTGAATACGGAAACTGCCGCGGGTAAGTCCCGGTTAAGAAAAGTTGCAAAGCAATGTGTGAATTATGGAACAAGAGTACAGAATTCTGTATTTGAGTGTGTTCTGGATCCCGGACAGTGTTTAATGCTGAAAGCTGCATTAACGGAATTGATTGATGAAAATGTGGATAGCCTCAGATTTTATTATTTGGGGAATCAGAATAAGGCACGGGTTGAACATGTTGGAGTGAATAAGGGGATTAATGTGAAAGAGCCTCTGATTTTTTAGTGCGAACCTGAAGCGCACATGAAATCCCCGGGGGATTCGCACCGGAATTTTGATGAGATATTGCTTGGGGTTGCTTTTTGATGTGGAAGAATGTAAGATGTAAAGTGAATTGGGTGTGGATTGTTGGTGAAGATGAATAGGAATTAAGAGTGGTTTTTGTGCAAAATTGCT # Right flank : AATATATTATTGCGATTAGGGTATTTATGTAAATCTCATAAGTATATTGCCATAACATTTTTTGTAGGCAATACGATGGGGAATTCATAGAGAAGAGTATGATTTGAGATAGGGAACAGGATAAATATATTATGAATACTTAAGCAAATGACGTTACCAGTCTGTCTTGTTTTGTCACGGATAGAAAATATATTAGAAAGATTACCATTATTAATCATAATTTTCATGGATAAGTTATTATGGCAGGATGTAGATATTATAAAAGGTTTTAGGTGGAAGTAGATGGAGATTTACTGAATGAAGGAGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTG # Questionable array : NO Score: 7.89 # Score Detail : 1:0, 2:3, 3:3, 4:0.53, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACCACCTTGCGGGTGGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.10,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 81074-80910 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHB01000005.1 Eisenbergiella tayi strain NML110678 BEI60_contig000005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 81073 32 93.8 33 T............T.................. GAATATGGCACAGCTTACGCCGCCGCGTTCACT 81008 32 100.0 35 ................................ ATAACTACAGAAATCCATCCCTGATCGTTGGTGAG 80941 32 68.8 0 GTCGA.GC.TA...................T. | ========== ====== ====== ====== ================================ =================================== ================== 3 32 87.5 34 CGTCGAAGCCTTGCGGCTTCGTGGATTGAAAT # Left flank : ATGATATGATTGATTTTATTTTGCAGAACAGTTATTTTTAATTTATTTATCTATGGTAATTATACACTTGCGTGTATGAAATAGGAAGATAATTCTTGGGAAGAGTTGAATGGAATGAGGGGGAAGGGGTTACTGGATAGTGTTGAGAATAAAAATTGAAATTTGAGTAATTTACGAAATGGAGAAGAAAGTTTCTTATCATTTTGAAAAATATGTGATATACTTTTATTTATGGTATGAGGCTTTTGGAAGGTAAGTTTTTTGATGATATGAATGGAGGATTTGAGAAAATAGTTGGTCAATGGTGATATTTGATAATTGAGTTATTTGGTGCGAATAGGAAGTGTACATGAAAATCCCGGGAGATTCGCACCTGAAAAATGGTGGATTTAATGGTGAAAAGATTGAGAATGATTAAAATGTAGTTATTGTGAGTGGGGATATTATAATATGTGTATAGATTGTTTTGTGAAATGAGATTTTTTTTTGGATGTTTTTGC # Right flank : ATCTTAATATCCATAGAGTTCACATACTGCTCGAAGCCTTTACCGTGTCAAGTATCAAAAAAAATTTTCAACATCTACATAAAAATAGTAATTATAAACAAAAAATGTATTTCATGATATAATGAGTAGGATAAAATAAACAAAAAACACCACACTTTTGGAGGAATATTATGTTCTTAGCCCATATCAGTGAAGATAAGCTTCGTGAACAAAGTATTCTTGATCATCTGGAGGGGACTGCTGAATTGGCAGGTGAATTTGCCTCTGCATTTGGAACTGAAGCTTGGGGATATGGCTGCGGCATGATGCATGATATCGGCAAATATTCCGATAGTTTTCAGAAGCGTATTCATGGGGGAAAGCTGACGGACCATGCCACTGCAGGTGCCAGGGAATTATATCAAAGACATAATTATGTCTGCGCATATTGTATATCAGGGCATCATACCGGACTTTTAGATGGAGGAAGTGCGGCCGACGTGGGAGGCGAAGCCACATTA # Questionable array : NO Score: 8.05 # Score Detail : 1:0, 2:3, 3:3, 4:0.38, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCGAAGCCTTGCGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //