Array 1 1713567-1710366 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXPG010000002.1 Citrobacter sp. RHBSTW-00827 RHBSTW-00827_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1713566 29 100.0 32 ............................. TACGCGGAAGTAGGCCTGCAGCTTACGCTGGG 1713505 29 100.0 32 ............................. CCGGGTGAGTTGGCGCTATCTCCGGCGAGACA 1713444 29 100.0 32 ............................. GCGGCATATAACTTCGGCGGCTTGTCTCTTAG 1713383 29 100.0 32 ............................. GATATGTATTGCCCAGCCAAGCCGGTAACTAT 1713322 29 100.0 32 ............................. CGCATCATCACCTCAGACAAATACGCAGACGT 1713261 29 100.0 32 ............................. CATATTCACGGCATCGCGCAACGGTGTGCGCT 1713200 29 100.0 32 ............................. GTTGGCGAAGTTGTAGTAAATATCACTACGGT 1713139 29 100.0 32 ............................. CAGGAGTGTTCGACCTTGACGCGATCAGGAGT 1713078 29 100.0 32 ............................. GCTGGGTATTCCCTATACAGCAACGGAAACTA 1713017 29 100.0 32 ............................. GTTATTGATGTTCAGCCCGGTACGCGCACCCA 1712956 29 100.0 32 ............................. CCGCGACGCATACCAAACATCTTATTCACGTC 1712895 29 100.0 32 ............................. CTCGTTAAACTTGCTCTCCCATTGCTTGCCGA 1712834 29 100.0 32 ............................. CTGCCCCGTCTGCGTCGGGCGGGCAGGATCGG 1712773 29 100.0 32 ............................. TCCGAACCGGACAACTTGCGACAATTGGCGAG 1712712 29 100.0 32 ............................. TTTATTTATTGCGGTGATTTCAGTCGTTTCCT 1712651 29 100.0 32 ............................. CTTATCCACCCCGGTTATGATGGCCTTTAACT 1712590 29 100.0 32 ............................. CATGAGCCGCCCGGCTGATGGCGGACGTTTTG 1712529 29 100.0 32 ............................. CTGTATCACGTGATCGCCACGTCAACGCAGTA 1712468 29 100.0 32 ............................. GAAACGACCCGCGCGAATGGTGCGGGAATGAC 1712407 29 100.0 32 ............................. TTTCCCGTCCTAAACCTGATCGCGTTCTCTGA 1712346 29 100.0 32 ............................. CTTGAGCGTCCTGAACTATTTAGGATTTTAGA 1712285 29 100.0 32 ............................. TCAGGGAGTAACCGGGACTGGAGGATTCCAGA 1712224 29 100.0 32 ............................. GGGTACGTCGGTTACCCAATCCGAGGTTCGAT 1712163 29 100.0 32 ............................. CCCAACAGCAAATTCATGTAAATCAGGATTGC 1712102 29 100.0 32 ............................. AAAAAAACATGCAGAGGATTTCATTAAACATG 1712041 29 100.0 32 ............................. TTTCAACGTGCGTTCTGCAACTTGGCGGTCCT 1711980 29 100.0 32 ............................. TCTCACATGTTGTTAAATCCCATACTTTAGAA 1711919 29 100.0 32 ............................. CACTGGTTCATCCTGATCCCCTGCATGTTAGT 1711858 29 100.0 32 ............................. TCTTCTTGATTCCTTCAGGTTCTGAAGATCGC 1711797 29 100.0 32 ............................. AATTTTCAGACCGTTGATGTTTACGGTTCCGG 1711736 29 100.0 32 ............................. GCTGAATTCTGGCCTTCAAACGTGCAGCGAGA 1711675 29 100.0 32 ............................. AGCTGCCACTGCGGCAGCTCTTTCGCGTTACA 1711614 29 100.0 32 ............................. GCCGAGGCGATAGCGACGATGACGTTTGAAAC 1711553 29 100.0 32 ............................. AGAGAGTTTCACCGGCCGCTATATTCCCTGCG 1711492 29 100.0 32 ............................. CCCGGTACAAGGGCTAAGTTCTGCCGGCGTAG 1711431 29 100.0 32 ............................. CAATGGAAGAACATCTACTACCAGATTCTCGT 1711370 29 100.0 32 ............................. GGGGAGTGAGATGGGCAGGCCAGTAATAGCAG 1711309 29 100.0 32 ............................. GCGAGGGGGAATCGTGCTGGATTGTAGATATG 1711248 29 100.0 32 ............................. ATTAATGGATTGAATCCATTCGATCATGATGG 1711187 29 100.0 32 ............................. TTTCGGGGTCGAAGTTGCTGGGCGCGAATCGG 1711126 29 100.0 32 ............................. GCTGGGACATCATGTTCATAATTCAGGATGTA 1711065 29 100.0 32 ............................. TAAATTATTCGATATTAATAAAAACATGGAAA 1711004 29 100.0 32 ............................. GGCAAACGAGAAAACCCCTCATAATCGTTTCT 1710943 29 100.0 32 ............................. AACCACGCTGTCGAACGCCTCGCCGGTGTCGG 1710882 29 100.0 32 ............................. CGCCGGACCTCAGAGAACCGGCGCATGCATAC 1710821 29 100.0 32 ............................. CATTACAATGTACGCCAACATGGATCCTGTAT 1710760 29 100.0 32 ............................. GCTGACGGTGCGCCAGCGCCGGTAGTTCCAGG 1710699 29 100.0 32 ............................. CGGCTCAGAAACGGCTACTGCGACCGTTAGAG 1710638 29 100.0 32 ............................. CTCATAGTATTAAGCATGAGATTGACACAACC 1710577 29 100.0 32 ............................. AATCCTGCGTGACGCCGGACTTTCCCGCACCC 1710516 29 100.0 32 ............................. GAAAAGTACAACCAGACGAAAGAGGCGTTTAA 1710455 29 100.0 32 ............................. CGGAGGACGCGGCCAAAATTGCTCGTAATAAT 1710394 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================ ================== 53 29 99.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATTGATTGAAGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGCAGATGCCCAACCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCGCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGAATTTTTTCTACGGCTATAACCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : CTTTGAAAGCAGAAATATTATGGAGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //