Array 1 1986-3674 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPUN010000106.1 Plantactinospora sp. S1510 NODE_66_length_38632_cov_6.6963_ID_131, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================================== ================== 1986 30 96.7 36 ....................A......... TCCTGATGCGGGCCGTGCGGCCGTCCTCGCTGACCT 2052 30 96.7 98 ....................A......... TTACGGGCTGCTGGCGGATGACTCGTCGGAGTATCTGTTGCGATCCCTCGGTGATGACCGACTGGCGTGGCTGTACCTGCGGGATCCCCCGGAGCCCG 2180 30 100.0 37 .............................. GGGTCGTGAGCCTGACTACTGACGTCCTGGACCTACT 2247 30 100.0 37 .............................. CCCCGTGGGGCAACTTGGAAAGCCGCTACAGCTACCC 2314 30 100.0 35 .............................. GATGACCAGACAGCCCCCTACGCTCTCTTCCCAGT 2379 30 100.0 40 .............................. CCGGGTCGATGTCCGCCGACGGCAGCACGACGCTGTGGTG 2449 30 100.0 34 .............................. GCCTGAATAACCCCGTAGGTACGTGACCTAACAG 2513 30 100.0 37 .............................. TGGACACCGCCACCCCCACCGACCGGTACTGCGTCTC 2580 30 96.7 35 ...................C.......... GAGGTTCACCGCGCCGCCATCAGCCAGATGTCCAA 2645 30 100.0 35 .............................. AAGGACATCCGCGCGGCGGCGATGCTCGGGGTGTA 2710 30 93.3 37 ...................C.....T.... AGGGCTAAGGCGGTCAGGTTCGACGAGCTCGAGCAGG 2777 30 100.0 34 .............................. TTGCGGTCTATCCAGTAGCCGTCCACCACCCGGC 2841 30 100.0 41 .............................. CTGACTACCGTCAGCCGGGGCTCTATGGGTTCGTGGCTAAT 2912 30 100.0 33 .............................. GCGACGTCGCGCCGTGGGCAGCGTCGGCTAGCT 2975 30 100.0 37 .............................. TCGCCAAGGGTGTCCAGGTCGCCACTCCGAACAACAA 3042 30 100.0 40 .............................. GCGAGATCCGTGGGGCGACGCCCTGGCCGGGTGTGAGCGC 3112 30 100.0 38 .............................. GTCCGCCCTACTTGACCTCTTCGCCCCGGAGGACTGAG 3180 30 100.0 35 .............................. TTGCTAGGCAAGCGCGTAGGAGAAACGCACTGTGA 3245 30 100.0 36 .............................. TGCCGCACCCGTCGCCCAGGCACTGCGGTCGATCGC 3311 30 100.0 36 .............................. GCGACGACCTCACCCGCGCAGGTCCGGGGGCTGCCG 3377 30 100.0 41 .............................. CTGATCTGGTGGCGTAGACGCACACGGACATCCCCGGAAAC 3448 30 100.0 36 .............................. CGGGCAGCTCCCACCCGTCGCCCTGCATGAGACGTT 3514 30 100.0 37 .............................. CCGACTACCCGACGATCGCAACCACCCTCGGCTACAG 3581 30 100.0 34 .............................. TTCTTTCTAGAGTCCGAAGTCGCGCACTGGGCCC 3645 30 96.7 0 C............................. | ========== ====== ====== ====== ============================== ================================================================================================== ================== 25 30 99.2 39 GTTGCGATCCCTCCAGGGGTGATGACCGAC # Left flank : CGCCCAGCAATCGGCCCGGGCGAGGTCGGCGGGCTCGTTCCCGGGCGCGGCTGTGCGCCAGGTCGCCGTCGTAGGCCACGTCGTGCGGGCGCGTGTTACGGCGTAGTTCCCGGCTGATCGTCGACGGTGACCGGCCAAGTTCGTCGGCGATCGCGCGTACTCCGAGCCCTTCCCGGCGCAAGGTGCCGATCCGTTGGCGTTCCAGCAACGACAGGAATCGGTTGTCGCGGGCGGCTTCGGCCAGCCGAACCGGCGGGACGCCGCCGTGCTCGGCCCGCCACCGATAGCCCGTCTTCCGACCGATGCCCAAAATCCGGCAGGCCTCCACCGTTTCGACTCCCGCCAGGATCATTTCCCAGTAGAGCGTTTCAACGTCCAGCCGCCGCTTACGTCCACGTCTCGCCATCAACACACCCATCATGATTACGGATGTTGCGACGAGCACTGGAACTCGCGGACTCTTGCTGGGTTCAGAATGCCGGAGCGTTGACACGGCCGTA # Right flank : CCCGAACCTTAAGTCGCAGGTCAGCCTTGCTCTCCACGCCTCGGTTTGGCCGAGTTTTGCAGCAGTCCGGCGGTTGTGCATCTTCGCTGGTCAGAGTACCGAATCCGGATGGCCGAGTTCGACGCCGATTGTCTCGACATCAACAAGATGTGCAGAGCCGATTCGGTACAGCCGGACGCTGTCGTAGCCCAGGTCGAGCTGTTGCCGCAACGCCGTTATGAGACTCCGGTGTTGCGCGGCGGACAGCTCACCTTCGAAGACGCTGCGCTGAACCCAGTGGAGATACTGCCGACAAGTCCGCAGCGCCGCAGGATTGCGCTCGACGGCGGTGTCGTAGACCAAGACAACGAACACCGGCTACCACCAGGGCCGAAACGGCTTGTAGGGCATGCCTTCCAGGCACAGCCGCACAAGCTTGAGCGCCTCCAGGTGAAGCAACTCCTCGTACGACACCTTGCGGCGCAATTGACGATGGTGGACGGTGGTCGCCAGCTCCTCCC # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.21, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGATCCCTCCAGGGGTGATGACCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 20984-22824 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPUN010000106.1 Plantactinospora sp. S1510 NODE_66_length_38632_cov_6.6963_ID_131, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 20984 30 100.0 38 .............................. TCGACATCGACCGGCACCCTGTCGGGTGGTACGCCCAT 21052 30 96.7 37 .................A............ TCGGGCGCCGTCTGCTGAACGACGAACTGGGAATCGA 21119 30 100.0 35 .............................. ACCACGTCCGAGCCGACCCGCCAGAACGCGGCCCA 21184 30 100.0 44 .............................. GTCCTCTCGGTTGGCCGCTCAGCGCGGCGCGGGGTGTTTCGGTT 21258 30 100.0 38 .............................. CCCGACCCGGCCGCGCACCACCACCCGCACCATCTCCA 21326 30 96.7 41 ................T............. TACGTAGCGGCGCCAACCGACGACCGGATCAGCGAGGTCAC 21397 30 100.0 37 .............................. GTTGGATGTCGATCCACTGACCCTCGTGCTCGTGGCC 21464 30 100.0 37 .............................. GCGTACGCGCGGCCGGCGAGCACCACGACGTCGGTGG 21531 30 100.0 37 .............................. CGGAACGCAAAGCGGACCTCAGCGAAAAGCTTGACTT 21598 30 100.0 37 .............................. CGATCACCGTCAGCCAGGCGCCGAAGTCCGCGCCCTG 21665 30 100.0 38 .............................. AAGCATTCCTCCTCTGCAGCGGCGATGATCTGCCAGTC 21733 30 100.0 27 .............................. GCCACCAGGACCCGCTGGCCCAGTACG Deletion [21790] 21790 30 100.0 36 .............................. AACGTGGACGGGACGATGGCCACCCTGCGCGTGCTG 21856 30 96.7 36 ................T............. GTGGCCGAACCTTCCTGAGGAGCGTGGGAGGTGAGC 21922 30 100.0 37 .............................. GTGGTCAAGGTGCTCACTCCTTCTCGGTGACGCTCGG 21989 30 100.0 41 .............................. TGTGACACGGACACGGTGAGTGCTCCTCGGGTGAGGTTGGG 22060 30 96.7 38 ..........G................... GCGAGTAGCCGGGCAACAAGCTGATCAAGGTCAATCAA 22128 30 100.0 35 .............................. GTGAGGTCCCACACCTAGAAGTCGGCGCCGGCCAG 22193 30 93.3 37 ...........T........A......... TTGGTGGAGACCATCGCCTGCCGGCCCTGATTGGACG 22260 30 93.3 40 ..T..........T................ ATGCTGCGGCCCTCGACGACGGTTCGCCCGATGGACAGCG 22330 30 96.7 41 ............G................. TCGCCCATCACGGCCTTGAGGATCGCGTCGAGCTGGCTCGG 22401 30 100.0 34 .............................. TTGCGCCATACGTATAGATCTTGGCGCCGACCGG 22465 30 96.7 37 .C............................ ATCCGGATCACGAAGTGGGGAAAGGTGAGGTTGATCG 22532 30 86.7 34 ......T..GC.............T..... ACGACACCGGCGACCGCGAACGGGTCGCCGCCGA 22596 29 93.3 37 ...........-....A............. GAGATCGCGGACAGGTAGAGCTGCTGCCCGCGGTTCA 22662 30 90.0 38 .....C............G...C....... GCCGGTTGAGGACACTCAACACATGGTAGCCGTTGGGG 22730 30 100.0 34 .............................. AGCGGCCACCACGCCACCGGATCGGTGCTGGGCA 22794 30 83.3 0 ........G..T........T...G..C.. | G [22818] ========== ====== ====== ====== ============================== ============================================ ================== 28 30 97.1 37 GTCGGTCATCACCCCTGGAGGGATCGCAAC # Left flank : GACCTCGCCGATGCTGCGGGTGATCGTCGAGCGGTGCACCCCGAACCACGCGGCGACCACGTCGTGGGTCATGCCGTGTCGTAGGTGGACCAGCGTAGCCAGCAGCCGGTCCGTGAACCCGAACCGGTGCCTTGCCCCGCCGCCGATGGCACGACGACGGGCCCTCCCGGTGAGGCGGTCGCGGTGACGGGCCTGCCATCGTGGCGCCAGCTCAGCGACCAGGCACTCGATCACCTGCCGGGACAGACCAGTCATCCGACGGTTGCTCATGATCATCGCGCTAATCATGATCAGGACAACGATCATCGATGCTCAAGCACGCGCAACCATGCACGAGGTCGTTAGAGTGTAATAATCGCTTCTGCGTCCCCTGTCGATGTCGACCTGGGTCACCCGGACTCAATGCTCTGACCAGCAAAGATGCACAACCGCCGGACTGCCGCAAAACTCGGCCAAACCGAGGCATGGGAAGCAGGGCTGACCTGCGACTTAAGGTTCGG # Right flank : CGTTCGGGCAAGGGTGAAGGACAAACGACTGCTGGCGCTGGTGAAGGCGTTCCTCAAGCCGGCGTGCTCACCGAACTCGGTGACCGGCGCGACACCCACACCGGCACCCCGCAGGGTGGGTTATGTTCAGCTGAACATAACCCACCCTGCGGGGTGCCGGTACTCGACTCGCGTAAGCCCTCGTCCTTGCTGAGGATGCCTGCTTTGAGGAACCCCTTCACCAGCGCCAACACCCGCTTGTCTCCGATCCGCCGACGCACCCGGTCCATCAGGGCCGTGTGGTCGATCTCGTCGAAGCAGGCGGTGATGTCGCCTTCCACCACCCATTCGTAGTCGCGTGGGTGGGAGGTGAGGTGACGGGTCTCCGCGACCGCGTCATCCGCCCGCCGATTCGGGCGGAAGCCGTAGGAGCACGGCTGGAAGTCCGCCTCGAATATCGGCTCTAACACCAGCTTCAGGGATGCCTGCACGACCCGGTCGGTCACGGTCGGGATCCCCAG # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.93, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGTCATCACCCCTGGAGGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //