Array 1 99236-98414 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADQVT010000002.1 Corynebacterium diphtheriae bv. mitis strain 02-16 NODE_2_length_255406_cov_39.435645, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     99235	    29	 100.0	    32	.............................	TTTCAGCGTGATACTTCAAGGTGGGTCGGTTA	
     99174	    29	 100.0	    32	.............................	ACCGACAAGATCCCCGCACGAAAAATCAATCA	
     99113	    29	  96.6	    32	............................G	CATGAGCTCCCATGCATTACAAAGGAAGATCG	
     99052	    29	 100.0	    32	.............................	AATGGGGGGTGCGCCCCCTCACCATCCGTATC	
     98991	    29	  96.6	    32	............................G	CCTGCGGCGCTCCATCGAGGAGTTTTTTCACC	
     98930	    29	 100.0	    32	.............................	TTGTTACTTTTCAGAAAAAAATCATCGCCTAG	
     98869	    29	  96.6	    32	............................G	CAGCGAACAGACATCCAGGCTGCTAAAGGTAG	
     98808	    29	 100.0	    32	.............................	CGCGATGGCACTGCGGTAATCGTCGGTGCTGG	
     98747	    29	 100.0	    32	.............................	TTATCCCCCAGTGCCCAGACGATGACACGCTA	
     98686	    29	 100.0	    32	.............................	CTGCAAGTACTACCTCGGAATCGTCATGCTAG	
     98625	    29	  96.6	    32	............................G	TCCGTAAACGGTGCATGAGGGAACGACCACCC	
     98564	    29	 100.0	    32	.............................	ACATGGCGGGGCCTATATGAAAGGATCGTTAC	
     98503	    29	 100.0	    32	.............................	ATTGAGGGACAGCTTAAGGCCCCATCTACCGC	
     98442	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  99.0	    32	GTTTTCCCCGCACCAGCGGGGATGAGCCC	                                	       

# Left flank :   CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGCCTGCCAGCCCGAATGACACGCAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCGTAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATGTAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAACAGTAGAAATAAAGATGAAGCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT
# Right flank :  AGGGACTTTGAGAACTGGACCGCCGTGATTCCTTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGGATCTGTGTTTTCATTCAGAGAAATCAGTAAATGATGGGTCTACTAAAAAATTTTGAAAAAATTAAATTTTAATATCTATAAGGTGTATTCTGTGGAGAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGGTGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCAGCTCAAGATTATGCTGTGATGCGGCTTTTGCTGGCTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCGTCTTGCTCGAAAAAGGAAAGATCAGG

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTCCCCGCACCAGCGGGGATGAGCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-12.70,-12.70] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.77   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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