Array 1 55922-53859 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSFI01000009.1 Thermodesulfatator autotrophicus strain S606 contig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 55921 30 100.0 38 .............................. TTTCAAAACCTCTGATTCCATTTTATATATTTTTTCTT 55853 30 100.0 36 .............................. TTTTATTTGAGTATAAATCAAGAACACTTATGATGC 55787 30 100.0 39 .............................. AATAGAATCTCCAGCTGTTCCCCAGGCTTGTGTAGTATC 55718 30 100.0 36 .............................. CCAGGAGCTGGACTTTTTATATAAAAGCTAAAGATA 55652 30 100.0 39 .............................. ATGATGACATTATAGAAGGTTCATTTTCTTATTCAATCC 55583 30 100.0 40 .............................. TGACAAGATAACTGATATATTTAGAAGGGCTACTGCACAA 55513 30 100.0 36 .............................. AGAGCTTAAACGTATAGTCGACCGAGAGGTATTGAA 55447 30 100.0 36 .............................. AAATATTAAAGCTAGCGGACGATGCAGGCTGGACGG 55381 30 100.0 36 .............................. GGAAGATCGGTCGGCTTGCAGAAAGAATGATTTTTA 55315 30 100.0 39 .............................. AGTAGCCCTGGCGTCGGGCTGCTTGCTTGGCGGCTTCTA 55246 30 100.0 38 .............................. TGGAAAAAGTTGTGTGGATTCACTTTCTGGAAACCTTA 55178 30 100.0 38 .............................. GTGGCTCGTCAAGCATTTCGTTCTCCCGTGCTCCGCAG 55110 30 100.0 40 .............................. TATTATCAGTGTGATATTTATACATCTTGCAGTGCTGCAC 55040 30 100.0 36 .............................. AGTGCCAGGCAGCCTGTATTCAGACAGCTCAATGTG 54974 30 100.0 38 .............................. GACTGACGGTGGCACGGGAGCAAGAGTGTTTGGGACGT 54906 30 100.0 38 .............................. TACCTTGTCTCCGTTTGTTAATGCGTCAGTAACGGCTT 54838 30 100.0 39 .............................. AGCTCTTTTAAACAAGCATTAATAAGAGGATCCCGAAAA 54769 30 100.0 38 .............................. AGTTATTTGTGAAAGGAAATCTGGAAGTTTAAGCCCAC 54701 30 100.0 37 .............................. TAGTCGTTTTGCGTCCAGGCTCTGAGAGCTTGCTAAG 54634 30 100.0 38 .............................. TCCTCCGTAACCACGATAGGGACCATTAGACCTTTCGT 54566 30 100.0 37 .............................. CGGGGGAGTAGTGCTTGAATATAAGTTCCGCTTCCCC 54499 30 100.0 37 .............................. GGTGTACAGGAAATGAAGCCGTTTGCGCAGACTCCAG 54432 30 100.0 38 .............................. GTGATAAACTGGGACATTGCATTCCATCATTAGGAAGG 54364 30 100.0 36 .............................. AAAATTAGAGAAGTTATTGAAGCTGCCTGGATAAGA 54298 30 100.0 36 .............................. TGATCTTCCTGAATTTCTTCTTTTTTCTCAAGTTCT 54232 30 100.0 37 .............................. CGGCCGCCACCAGGTAAGGATTGCCCTATTTTTACCA 54165 30 100.0 37 .............................. CCAATTGTTGATATGACAGACATAAAAAACTTGCAGA 54098 30 100.0 38 .............................. TTCATATAGATGTGGTGTTTTAAGTGCGTAATTTCCGA 54030 30 100.0 40 .............................. ACCTTTCGAGATCAGTTAGGTCCACAAAGCTGTTAAACAC 53960 30 96.7 39 .............................T CTCGGAAAAGTGGTAACTGTTAAAGTATCAACAGTAGGG 53891 30 83.3 0 T...............T..T....C....A | T,G,T [53862,53867,53873] ========== ====== ====== ====== ============================== ======================================== ================== 31 30 99.4 38 GTTTGAAGCCTAACTAAAAGGAATGGAAAC # Left flank : AGCCTAACTAAAAGGAATGGAAACCGACGGAGACGGTGACGCCTCGAGCGGTCTGGTTC # Right flank : CAGATGACAATTTTTGGTTGTCATTGCGAGCGAAGCGAAGCAGTCTCATAAGAAGTTACTCCACTTCACTCGTTAACAAGGACCTATGCCGTGCCCGTGCTGTCACTGCGAGGAAATCCCTCGCTCGGGACAGGCGAAGCAGTCTAAAAATCAGCCAATTTAAAAATCTCCTACCTATTAAGAAAGGGTAAATATTTCTACTCCTCGGGCTTTTCTCCGATCATTTTTAGGAATTCATCTTCATTTATAATTTTTAACCCTAGGCGTTGGGCACGGGTAAATTTAGAACCGGGCTTTTCTCCCACCACCACGTAATCAACATTTCGGGAAACATCAGAGGCCACCCGCCCTCCCAGGGCCTGGACCTTCTTTTTGGCCTCATCGCGGGTCATGCTTTTCAAAGCCCCGGTAAAGACAAAAGTCAGGCCTTTTAACGGCTTTTCTTCAGGTTTTTCTTCTTTTAAGTCTTCAAACTCAATACCGGCCTTAAGAAGCTTTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTAACTAAAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 3583-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSFI01000003.1 Thermodesulfatator autotrophicus strain S606 contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3582 30 100.0 37 .............................. GCGCGTGGACGCAGTAAAGAAAGAAGTCTCCGAACTG 3515 30 100.0 37 .............................. CGACGGATACGTCTATGGTGCTCTCAACGACGGTTCT 3448 30 100.0 40 .............................. GTGAGCTTGACCATCGCGGGATGTTCCGGCACGACTCCCT 3378 30 100.0 38 .............................. GGCGCAGAGGGCTAATCTCTCCTCATCTGAAGCATCCT 3310 30 100.0 39 .............................. AAGGGCAATAGACGACCTTTCGTGGAGAGGTCACGGCTA 3241 30 100.0 37 .............................. AATATAGGGTCATCATCGGTGAATATCTCAGCTTTCA 3174 30 100.0 39 .............................. ATATACATTCATAGGAACACTATTATCTTTGTAGTATAT 3105 30 100.0 36 .............................. ATAGCTTGTTTGATTGTTTGTTTACTAGTCTTATGG 3039 30 100.0 36 .............................. AGGTTTTTGTTTAGGTAATCTATAAAGGTAGGTAAG 2973 30 100.0 38 .............................. TAAACTAAAATCCATCCAGTATCAGCTATTTTGGTTAT 2905 30 100.0 36 .............................. TGTATAGTTATGAACATATACTTTAAATTCGCTATC 2839 30 100.0 36 .............................. GGTTGTGCTACTTTTTCTGTTATTTGTGTCACATTT 2773 30 100.0 40 .............................. TTCGACGACCACAAGGGCTTCTATTTCTTCTCTTAGACGG 2703 30 100.0 36 .............................. TGATTAGTTTGTGGTGGATAACACTAGAATGATACT 2637 30 100.0 38 .............................. CTATAATAACACCAGCCAAAAGACTGGTGTCTTTGTAT 2569 30 100.0 36 .............................. TAGAATTGAGGTTTATCCTTACTTGGAAGTCCCTGA 2503 30 100.0 36 .............................. CAGCAACTTCTGGGAAGGGAAGTTCTTAACCTAGCG 2437 30 100.0 36 .............................. TAGAATTGAGGTTTATCCTTACTTGGAAGTCCGTGA 2371 30 100.0 36 .............................. TCAGGGAAGGGGGTTGCGTCAGGACGAGAGAGAGAA 2305 30 100.0 36 .............................. ACAGCTTGCAACGGGACCTCTTCGGATTCACTTTTG 2239 30 100.0 36 .............................. GACAGAATTCCCCTGGAGGAGATGAGACGGGGTGAA 2173 30 100.0 35 .............................. AAGTTTAAACTTCTCTCATAATACCGTCTTGGTCC 2108 30 100.0 35 .............................. GACTCCCAAGCTTGCTCGAATCGTCTGGGAACTTA 2043 30 100.0 37 .............................. TTCTTTGAAAGGCAAAAACACACGTAACCGAGGGCGT 1976 30 100.0 37 .............................. AAAAAATAGACTTTCAGCCTTATATGAACCGATTCTG 1909 30 100.0 36 .............................. TAAGTTTTGTTTTGTAAACATAAGGATAACGCTTGC 1843 30 100.0 37 .............................. GGTTTCAGTTTCAAAATAACAGATATAGCTAAAGTTA 1776 30 100.0 38 .............................. GATTTATGGAATATTGCACATCTTCCATGTATTCGTGC 1708 30 100.0 37 .............................. GAAGCTCGACAAGAAGTCGTCCCTGAGCATGAATGGG 1641 30 100.0 39 .............................. AGAAATGGTAGCGCTTATGAATACATACTTGGCCGAAAA 1572 30 100.0 38 .............................. TGCCTTCGTGGAGTTAGAGAAGTTTTTACCACTCACTT 1504 30 100.0 38 .............................. TGGATATATATGATTCCACCAATCACTTATTCGCTCTC 1436 30 100.0 36 .............................. GACAATAAGCCAATGGTCTTATATAATCTCAAACTA 1370 30 100.0 36 .............................. TCTTAAAAAAAAGTAGCGGTTACTTGGCGGTTACAT 1304 30 100.0 37 .............................. AACTTGCATCTATGCAATCGTTTATAATATATTTAAG 1237 30 100.0 38 .............................. TGGAGCATAAAATGGAATTTAACTTCTTTTTCTTTCAT 1169 30 100.0 39 .............................. ATAATTTGCACAAAGTGGTGACATATATGTCACCGCTTT 1100 30 100.0 36 .............................. GCTACTCTTAACGATAGCCCAAGCGTGGGACGGCAG 1034 30 100.0 39 .............................. AGAGAAGCGTTTGCTCCGACACTGAAAGATGTAGGGCGT 965 30 100.0 37 .............................. AGTTCTGAGCGGCGATCTTCTTGAGGCTGCCCTCAGA 898 30 100.0 37 .............................. GGCGGAACAAAAGGCTCAGACTGCATCTGAGATCCTG 831 30 100.0 38 .............................. GAAAATATGTCAATAAAATTTTGACTTTCCTCTTGCAC 763 30 100.0 37 .............................. GATAGCTCGCTAAGCATCTTAACTGGGTCAATCTCAA 696 30 100.0 37 .............................. GATTGACCGCCCTTTTTGTTATTTTTCTTTATGCTTA 629 30 100.0 37 .............................. TATCTTGACCTCTCTTGACTTCTATGCTAATCTATGT 562 30 100.0 37 .............................. ATGTCTCCAGCTAAGCGGTCCGCATGTTTCATACCGA 495 30 100.0 37 .............................. AATTTCGTTTTTTCGTTTTTTCGTTTTTGTTGTTTTC 428 30 100.0 36 .............................. AGTCATGGTTCGGCGAGACTAAGAGAAGTGGAACGT 362 30 100.0 35 .............................. AATAACTTGCATAGCTACACCTCCTCACCGTCAAA 297 30 100.0 36 .............................. GAAGTTAAGCAAAACTGAACAAAACAATCAAAACAG 231 30 100.0 38 .............................. ACGTAAAGGCCAAGTAAGAGGCCGCAAAAGGGCTTTTT 163 30 100.0 37 .............................. ACTCTTGGTAGCGCTTTTTTTCTTTTAACGCAGACTT 96 30 100.0 37 .............................. GGCAATAGACTATTGTCTATCGCCTGGACTAAATAAC 29 29 96.7 0 .............................- | ========== ====== ====== ====== ============================== ======================================== ================== 54 30 99.9 37 GTTTGAAGCCTAACTAAAAGGAATGGAAAC # Left flank : GGAAAGAAGAAAGGAGACCCTGACAGCATATTTGTGTGACTTTATTAGCCCCGTGTAAAAAGCTAAGCAACAACTCAACCCTCTCCCAGTGAAAGAGGGATTTGAGGAAATTATTTATTTTTTGAGACCTTTGCAAAAATTTAGATTAGAGATAGGTTTATGACACCACGGCGATTATATCGCCTAGCGGCAAGGATTCTTCACTATCGCAATGTTCCTTCCAATTTGTCACTGCGAGGAGCGCGTAAGCGCGACGAAGCAGTCTCGGAAAGTTTTAACTTTTTAGTATCCTGAGAACAATAATTAACATAATAAAGGCTAAAATTTGTTCAATAATTGACACTTTATCCTCCTGTAATCTAAATTTTTAGCTTTAGCCGCTGGATGCCCGGGTATTTTTGCAGGATTGGAGGTCCAGCGGCTAAATACACCTTTTTCAGCAAATTGACTTTTGCCGAAATTGTTGATATATAAATAAAAACAAGTTCATTGATATGAGG # Right flank : A # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTAACTAAAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 18345-14252 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSFI01000049.1 Thermodesulfatator autotrophicus strain S606 contig49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================== ================== 18344 37 100.0 37 ..................................... ACGGGAAGGAAGCCGTTTAACTTCCTTCCAGTCGTTA 18270 37 100.0 38 ..................................... CAGGAAAACACCTTCTCTATCCCTACCTCGTCACTCCT 18195 37 100.0 38 ..................................... TAGCTTTATAAATCGTCAGCTTTTCCTGGAAATCTCGG 18120 37 100.0 40 ..................................... ACGCATCCTTCGGTGTCAAACCCTTATGGCTTCGGAATTT 18043 37 100.0 40 ..................................... GATTTCAGTATGCGGGGTTTCTTTATGGAGAGCGCCAATC 17966 37 100.0 37 ..................................... ATCCAAGGAAATATCAAGGCTACCAAAATCATCTAAA 17892 37 100.0 38 ..................................... GGGATATTTTCTTCTTTGTATTTTTTACAAAGGTCTAT 17817 37 100.0 39 ..................................... GTAGGTCAAGATCATCCAGATTTTCCCAATACAGTGAAA 17741 37 100.0 40 ..................................... TTTGTATTTGCATCATTAATATGTAGCCATCGGTGCAATC 17664 37 100.0 40 ..................................... TCTAAACAGCTAGTATCAATTTCAATATTAGACGCATTCT 17587 37 100.0 40 ..................................... ATAAAACAATAGAATATCTAGTAGTTCATCTTTGATATTT 17510 37 100.0 42 ..................................... ATATATTTCTTTTACTACATCCTTTGAAATATTTACCATAAA 17431 37 100.0 38 ..................................... GTAAGTAAGCAGTAAAAGAACAACAGGTTCTAGGGCGG 17356 37 100.0 37 ..................................... TTTTCTTTATTCTTGCCGTTCGTTAGCCGTTCGTAAG 17282 37 100.0 40 ..................................... GTGAGAAACTTCTCTTCCAATACCGAACCCCAAAATTCGT 17205 37 100.0 37 ..................................... CAGTTCTCCTGGCCCCCACACCAAGCCGTCTCTCACA 17131 37 100.0 38 ..................................... TCAATCAAAAAGACTTTTAATTTTTGAGCTTCTATGTT 17056 37 100.0 40 ..................................... ATTTCTCTTACCCCCCTTAGTTTTTCTTTATTCTTGCCGT 16979 37 100.0 43 ..................................... TCAATCAAAAAGACTTTTAATTTTTGAGCTTCTATGTATAGCT 16899 37 100.0 39 ..................................... CATAACGCACCAAAATTATCTTTTGCAACCTTGGTCTAT 16823 37 100.0 38 ..................................... TCCTTAAACTGGTTTCTTATTTTCCGCATCAATTTCAT 16748 37 100.0 40 ..................................... CTAGACGCCGCTGTTGCTATTCGTTGCACACAAGCATAAA 16671 37 100.0 41 ..................................... CTGTTTGGTATTCATCCACATATTTTTTAAAATAAATAAAA 16593 37 100.0 38 ..................................... AAGCTGGCGGCACTCCAAAAACTGCGCATATTTCCTCT 16518 37 100.0 38 ..................................... CAAATAATTTATCCAACTGATACACTTTATAAGCTTCT 16443 37 100.0 39 ..................................... TTTGCTGTTTCCCAAATCATTCTAACCTCCTTATGTCCA 16367 37 100.0 40 ..................................... TGCCTTACTTGTTGTTTCTTTCTTAGCCTTTACTTTCTTA 16290 37 100.0 38 ..................................... CCGTGGCTATTGCGAGAAGCGTTTTGCCTGTGGCTTTA 16215 37 100.0 38 ..................................... TACCAGAAACAAACTTTGCCCTTCTGGCAATGTTAAAT 16140 37 100.0 36 ..................................... CCGCATCAGGGAGACAATGTCCCTTTCAGTCCTGTG 16067 37 100.0 40 ..................................... TGATTCTTCCCCCTCCCGTTCTTCGAGAAACATCGGCCCC 15990 37 100.0 38 ..................................... TATCATTTTTCTGCCCCCTTTTTCTTTATGCTTACAAG 15915 37 100.0 37 ..................................... GCGCTTTGAGTAAACTCAACCTTTTCAACCTTTCCAA 15841 37 100.0 42 ..................................... TTACCCCCACAATACGCCCCTCTTCGTCCCTAATAGCCCCAT 15762 37 100.0 35 ..................................... TCCTGCACCTTTATCATTTTTCTGCCCCCTTTTTC 15690 37 100.0 41 ..................................... CAAGCGGCTGAAAGACAAAAACTTTCTTTGTCTTGGTGTAT 15612 37 100.0 40 ..................................... CAATAAGCCTCTCACGCCATTCTTTTAACTTTTCCATAAC 15535 37 100.0 40 ..................................... TAACATCTCCCATCTCTCTTACCTCCCGTTTTTATTTTTT 15458 37 100.0 40 ..................................... CCCTTGTATAGTTCTCCAATCCGAAACCAAAATTTTGGCC 15381 37 100.0 36 ..................................... ATCATCGCTGTCTTCTAAATGATACTGTTTTTCTAA 15308 37 100.0 41 ..................................... CTGAATTCTATGAATAGCTCACTTTCAGCCAAAACTAGGGT 15230 37 100.0 40 ..................................... TTACTTACCTCCTTTTACAATAATTTTTCTAATGCATTTT 15153 37 100.0 40 ..................................... TCTATATCTACCAATGAGAACCCACTATCATCATATTTTT 15076 37 100.0 42 ..................................... TTTCCTTCTACATAAAACCAAAATTTGATTTCTTTCTTTTCC 14997 37 100.0 38 ..................................... CAGCCCATTATTTTCTACAATAATGGGCTGGCCATTAA 14922 37 100.0 38 ..................................... TCTCGATAGAATAAAATATTTTCCTATCGAGATTTTTA 14847 37 100.0 38 ..................................... TGACCTAGGCTAAAAAAAGAATATGAGCGAGCTATTTT 14772 37 100.0 41 ..................................... ATATACACTTGGCCGGTATATTTCTCTGATAAATAAATATT 14694 37 100.0 42 ..................................... CTACTTAGTTTGGTAGCCAAGCTTTTAATTCTTTTTTCAATC 14615 37 100.0 38 ..................................... GCTATTCTTAAGACTTCTGAGGTCATTGCCTTCTCTGG 14540 37 100.0 36 ..................................... AACTTAAAAATCTCTCTCCTTTAAGCTTTAATTCTT 14467 37 94.6 49 ...............................G...G. CCCCTGGCCTGTTACCTCCTGATGAGCTTAGTTTGAGGGGCACTGCTTG A,GG,G [14430,14435,14439] 14377 37 86.5 52 .............................CAGGT... AGGCCCCTGGCCTGTTACCTCCTGATGAGCTTAGTTTGATGGGCACTGCTTG 14288 37 78.4 0 A...............A...........GCAGGT... | ========== ====== ====== ====== ===================================== ==================================================== ================== 54 37 99.2 39 GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC # Left flank : CCATTAATAAATAGTTCTTTGAAAATTGAATAGTGTTAATGGCAAGGCTTCTTATAATAGCAGTTTTATTTAATTATTAATCTTTCTCTGTCATTGCGAGCTCTTTCTCTGTCATTGCGAGCGGAGCGAAGCAATCTAAGGCGAAGCAATCTTTCCGAGTGATACCGAAGAGATTTAAATCGCCACGGCAACTTAGTCATCTCGCGAGATACTCTGTAACGCAACAATGTTTTAACTAATAAGAAATGGGGTATCCCGGTCTGATTTTGGTCAGGGGTACCCCTTTTTCGCGCAAATTTATAACTTAGCAATTTATCGTTAATTTTCAGACGGGTTATTTTAACCCTGACCGGTTATGGAAAGTCTTGGGCTTCAATGGTTTCAGGTGGTTCTCGAGCTGGAAGGTAGAGTTTTAAAGCAGGTTTTAACCGGTTTTTCCCTGAGCCCTGACCTAACCTGCCATCTAACCTGTTTTTATAACGTCGTTTTTAAAGGCAGCT # Right flank : AGGCCCCCTGGCCTGTTACCTCAGCAAAACGAAATATATTTCGTTAGCCGAGACCAAAATTTAGGGCAAATATTTTAAGAAAATACCTCTCATAAAGCTCTTTTTTTGATTTTTGTAATGAGTTTTTCCAGAACCGAACAATAAACTTTAGTGATTCTCATAAAGATCTCTTCCGCCGTTGATTCGTCGTAGATGTGAGAACTACGATTACGGTCTTCAAGCATGTCAAGAACTATTTCGTCATCATCAATCAATCCCGCTCGGAAGGCTTCTTTGATGCATCTACGAGGACTGGCACATTCAATTCCTTGATAAGCAAGGATAATTTTCAAGGTTTTCCAAAAGAGCTCTACGGTAAATTCAAAGCGTTGAATGACTCCGTCACGATCAAGATCATCCTTGACTTTGGGAAGCGCTTCTTTAAGACGAGCAAAAGCCTGCTCTAGTTTATCAATAGCTAAATATAAGTCAGTTTTTTTCATAGACTATTTCTCCTGTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //