Array 1 57395-53799 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEMJ02000022.1 Xanthomonas vasicola strain BCC265 scf_27102_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 57394 31 100.0 34 ............................... CGTGCGCGGGGCGCGTCTGCTAGCGGCGGTGTGA 57329 31 100.0 36 ............................... AAGCATGGCGATGTGGTTCGCGACTTCCGCGTGCGG 57262 31 100.0 37 ............................... AAGAACAAAACTGCTGCTCTGGCCGCAGTCGGCTCGA 57194 31 100.0 35 ............................... TGGTTTAAGGAATTCGGACGTAATCGCATAGAAGG 57128 31 100.0 36 ............................... AAGAACAAAACTGCTGCTCTGGCCGCAGTCGGCTCG 57061 31 100.0 34 ............................... ATTGACCCGCCATAGAGTGCAGCCACATCCTCGA 56996 31 100.0 35 ............................... CTGAACCAGTCCTCCGGGATACCTGTGATGCTCTT 56930 31 100.0 35 ............................... ATATCAACGGTGTACGTGATGATAATCGCCTGTGC 56864 31 100.0 34 ............................... ACGGTATCTGGGTATACCGAAAAATAAGCTGCGA 56799 31 100.0 34 ............................... GTCTATGACGTCACGACCTGGATTTTACGCAACG 56734 31 100.0 36 ............................... GTCAGGTAAAGGGTCTGCTCTGCCTTTGCATACAGG 56667 31 100.0 35 ............................... AGGCATACACAGGAAACTAGGGATAAAATAAGTGC 56601 31 100.0 35 ............................... TTCACCTAGGCTCCTACCCCACCGCTGACCTGGCC 56535 31 100.0 35 ............................... GCTCCTCCACAGCCTTAGTTGAGTCATGGCATAGC 56469 31 100.0 34 ............................... CAGTTCTACGCAGAACACGAAACAATGACGACAT 56404 31 100.0 35 ............................... CTTTAGCAGGCGTTCACCACTCTCTTGATCATATG 56338 31 100.0 33 ............................... CTGGTGTGTCTGTCTACCTTGGTAAGAGTTGGC 56274 31 100.0 37 ............................... CAAGTCCACCTTGTCATAACCGTACCGATTCGCACCG 56206 31 100.0 36 ............................... CTTACTCAGCTGCATGGCTAGTGCACTTCGCTTATT 56139 31 100.0 35 ............................... AACCAACGCAAGTCTTCCGGGGCGTCTGGATCTGC 56073 31 100.0 36 ............................... CTGAAGCCCTGCCAGGTTACGTACCTTCCGAAGGGA 56006 31 100.0 35 ............................... CAGTCCTGAATAATGTCCTCATGCCCAATGAACTG 55940 31 100.0 37 ............................... CCTTGCGTTCGCCTGTCTTTGGGTCTCCCGTCCAGTG 55872 31 100.0 35 ............................... AGATTTTGGCGGTGCATCTGTTGTACTCCCTCTGC 55806 31 100.0 34 ............................... TGGGCATTGGACAACCATCAGCCCCTATGCAAGC 55741 31 100.0 35 ............................... CCACTGTGGCAGGGCCTTGACATAACCGGGGAAGC 55675 31 100.0 36 ............................... AGTACAGGTCACTGCATAGTGCCTACTGCAGTACGG 55608 31 100.0 35 ............................... CAATATGGAGAGTTCCTGATGGACTACCTAGTTGA 55542 31 100.0 34 ............................... TCGCCAGAGAGCCTTACCAGCGAACTTGCCGTGG 55477 31 100.0 35 ............................... AAGGTAAGCACAATGTGGTTGAGCAAGATCTGTCC 55411 31 100.0 34 ............................... TTAGCAAGCATGCCAACGTAGAGGTGGGCCTGAA 55346 31 100.0 34 ............................... TTAGCACCACCAGCAAAGCGGGCTAGCTGATACT 55281 31 100.0 36 ............................... AGGCACTGCACTGTCCCAGCCATTGGGGCCCTTTGA 55214 31 100.0 35 ............................... TGGCGGATTAGCTCCCCCTTAGCTGTATCCACGTA 55148 31 100.0 32 ............................... ACAAAATAAGGAGGCCCTATGGCCGAGCAAAA 55085 31 100.0 35 ............................... TTTGTCGGCTTTTTCAGCAAGGGCAAGCAGGAGAC 55019 31 100.0 34 ............................... GAGCTATGCGTGTTCGAACCAGTGCCAGTACACA 54954 31 100.0 34 ............................... TGGGAGACTGTCAGACAATAAGCTGGTGCTGACG 54889 31 100.0 35 ............................... TGCAGGATGCACAGAACCACCAAGCATGGATGCAG 54823 31 100.0 35 ............................... CTAAGTGATAGCGAAGAATGCAGGCGGCTGACCTA 54757 31 100.0 37 ............................... GTGTACACATCTGCCGCCCCTAGGTCCGCAGAGGCAA 54689 31 100.0 35 ............................... ACTCTTTTGTACCAGCAGCGCATCATTCTGCGCCA 54623 31 100.0 34 ............................... CTGTGCTGCATGGCGCACGCGAGATTGCAGAGTT 54558 31 100.0 35 ............................... TTTGTCAAACATGGTAGCGGCCTCCGTTGGTGTAG 54492 31 100.0 33 ............................... ACCTTTGCAACCCTTACCAGCATACAGGCCGAT 54428 31 100.0 35 ............................... AGGCGCATCTCGAAGATCTTCACAGTTAATTTCCT 54362 31 100.0 36 ............................... ATCCCCATCCTCGTTTTGTGTGGCCGGTGCGGGCCG 54295 31 96.8 38 .....................C......... GTCTCGCTGGCGACGTTCTGGCTGCTGCTGCCCACCGG 54226 31 100.0 35 ............................... TCCTCCGGAGTCATGGTTGCATCCCCGGCTTGGCG 54160 31 100.0 35 ............................... GTTTCCAAGGTCGCAGCCAACGTCACCCGCATCAT 54094 31 100.0 37 ............................... GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG 54026 31 100.0 35 ............................... AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA 53960 31 100.0 35 ............................... TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA 53894 31 93.5 34 ..........GC................... AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG 53829 31 90.3 0 .............A.A.....A......... | ========== ====== ====== ====== =============================== ====================================== ================== 55 31 99.6 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : AAATGACGCGACTCAAGCCCCATGATGATTCTTGTCAGCTACGACGTCAGCACCAGTTCTCCCGGCGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGTGACCGTGGCCAGCGCGTGCAATTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTGCGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCCCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAACAAAAAAATAAATAGACAGCGGATTCACGGGGCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGG # Right flank : ACTTTAGACTCGCCCGCCAGCCGGACGCTGACCAGGTGCAGGTTGGAGACGCTTGAGGCCTGCATGTAGCACGGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGCACCATTATTTGACGATGATCGTCTGAGGCGTGCCTGCAAGCTTCCCGTCCACCATCACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCGGCCACCTGGCCATCCTGGTAGGCCAGCTTCGCCGACAGGGCCACGTTGCTCGCGCTGCCGTCGGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTGGCCGGCGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACGCTGGAGACCGTCACTGCACTACCCGTCGCAGCGCCGCCATCGGTGCTGGCCGCTCCGGTGG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //