Array 1 333879-333007 **** Predicted by CRISPRDetect 2.4 *** >NZ_FSQQ01000004.1 Mycobacteroides abscessus subsp. abscessus strain 1105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================================================================== ================== 333878 28 100.0 33 ............................ GAAGAAGATCTTTTGCAGGCTGACGTCGCCCGA 333817 28 100.0 33 ............................ GCTCGCCTGACCAACCCCATCAACGACGAACGG 333756 28 100.0 33 ............................ GGAGCCGACGGCGCTGGCGGCCGGCAGCGAAGA 333695 28 100.0 34 ............................ CACCACCGCCCCGCTGTCGCCGATCTCGGTGCGT 333633 28 96.4 33 .............G.............. GAAGGCGCAAGAGAAGTTGGGCACCCTCGGTAC 333572 28 96.4 33 ........A................... GAAGGCGCAAGAGAAGTTGGGCACCCTCGGTAC 333511 28 96.4 33 ........A................... GGTGAGGGCTGTCGAGGTCGCCGGCGGCACCGT 333450 28 92.9 33 ..C..........G.............. GTTGGAACAACTTTCTGGATTCTGTCCCACCCT 333389 28 92.9 32 .............G..T........... GACCGTCGCCACCAGGTGCGAGACGCTCACCC 333329 28 96.4 34 .............G.............. GCTGCCCGCGCGCCGACTTCCCGGCGGCCGTCAG 333267 28 96.4 32 .........................C.. CCGAATCGGCGGCCGCGTGTCTGTCAGCGCCG 333207 27 82.1 33 ...T..........-......G..TT.. CCGGGTTCGCCCGGCCACCCGCACCGGTTCGCC C [333205] 333146 27 82.1 84 G...........T.-.........TT.. CGTCAGCTTGCCGTTCGCGTAGGCGAGCCACTCGCGTGCGCGGGGTGTTCCCTTGCCCGCGATCCGTGTCGGCCGCACTTACCG 333035 27 82.1 0 G..T........T.-......G...... | T,T [333010,333013] ========== ====== ====== ====== ============================ ==================================================================================== ================== 14 28 93.9 37 CTGCTCCCCGCGCAAGCGGGGATGAACC # Left flank : GAGAGCCACCGCGGCAATGATGCCCGCGGCGGCGATCTTGAGCGCGTTTCTGCTGGTCACGGTTTCGATTGTTCCAGACGATGTCGAACGAACCGCCGAATGCGATGTCACGTCCCCCGTCCGGATGTCTTGAGCGGGAGCCGGATTCATGGACGTACCGCCTCGGCGAGGCGCCGCTCCACGGCGCGGAGGTCATCGATCGCAGCGGTGAAGTTGGCCCCGTCGGTGCCGGTGCCGTGCGCGTGTTCCAGGAGCTCCACCACGCCGCGCAGACGCGTCTGTGCGCTGCGCACATTGTCGTGGATCGACGTCGCCGGGCTGGTGATCAGGTCGCGGTAGTCGGTACTCATGCCCGACACGGTGCACGCCCCAGCAGCGAGGTGACGCCCGCGGCGCGGGTTCGGCAGGTGCGCTCGCCATGCTCGCAGGAGGTGGCGATTGTTAGCTTGTCACAGGTGTCAAACTGGGCACTCGTGCTGTATCGTCCCAGGTCAGGAAGT # Right flank : GTTTCCATTCTCTGTTTTGGAGAATGTTTCCGCTGGTAGAGGCGCTGCGGTGAATGCGCGTCCTCCTTGACGGCGTTCGCACAGATGTGCACAATCGGTTCAAGTCGCGATCCGAGCGCGACGGCGGCCTCCGGGTCGTTCAGGGCACGTGCCGCATCCGCCGGACACGCCGCTCAGCTCCCGCCCTCGGACCAGGGACTGCTGAGGGTGCACCCGGCATCACCTTCTTGTGATGCCCAGGAGTGCGCCCATGAGTGCCAACATCACCCTTCTCACCATCGACGCTGCTGCTGCGCGCCGCGGCGTTCATCACTCGACTATCCGCCGCTGGATCCGCGAGAGCCTCCTCCCGGCTACCCGTCTGAGCGACGGCACCCTCCGCGTGACCGCGGCCGACCTCGACGCGGTTCGTCCGCCGGAACGGGTGAAGCCCCGCTCCGGTGACACCGTGTCGACCCTGCGCGCGATCGTGAACATGACCGGCGGCGCGATCGAGGACC # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCAAGCGGGGATGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCAAGCGGGGATGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //